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Genome-wide association study implicates CHRNA2 in cannabis use disorder
Veera Manikandan Rajagopal,
Thomas D. Als,
Jane Hvarregaard Christensen,
Laura M. Huckins,
Eli A Stahl,
David M Hougaard,
Preben Bo Mortensen,
Anders D. Børglum
Posted 21 Dec 2017
bioRxiv DOI: 10.1101/237321 (published DOI: 10.1016/j.euroneuro.2018.07.008)
Posted 21 Dec 2017
Cannabis is the most frequently used illicit psychoactive substance worldwide. Life time use has been reported among 35 to 40% of adults in Denmark and the United States. Cannabis use is increasing in the population and among users around 9% become dependent. The genetic risk component is high with heritability estimates of 51 to 70%. Here we report the first genome-wide significant risk locus for cannabis use disorder (CUD, P=9.31x10-12) that replicates in an independent population (Preplication=3.27x10-3, Pmetaanalysis=9.09x10-12). The finding is based on a genome-wide association study (GWAS) of 2,387 cases and 48,985 controls followed by replication in 5,501 cases and 301,041 controls. The index SNP (rs56372821) is a strong eQTL for CHRNA2 and analyses of the genetic regulated gene expressions identified significant association of CHRNA2 expression in cerebellum with CUD. This indicates a potential therapeutic use in CUD of compounds with agonistic effect on the neuronal acetylcholine receptor alpha-2 subunit encoded by CHRNA2. At the polygenic level analyses revealed a significant decrease in the risk of CUD with increased load of variants associated with cognitive performance.
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