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Cell BLAST: Searching large-scale scRNA-seq databases via unbiased cell embedding

By Zhi-Jie Cao, Lin Wei, Shen Lu, De-Chang Yang, Ge Gao

Posted 24 Mar 2019
bioRxiv DOI: 10.1101/587360 (published DOI: 10.1038/s41467-020-17281-7)

An effective and efficient cell-querying method is critical for integrating existing scRNA-seq data and annotating new data. Herein, we present Cell BLAST, an accurate and robust cell-querying method. Powered by a well-curated reference database and a user-friendly Web server, Cell BLAST (<http://cblast.gao-lab.org>) provides a one-stop solution for real-world scRNA-seq cell querying and annotation.

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