Rxivist logo

Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 70,242 bioRxiv papers from 306,709 authors.

Pan-Cancer Analysis of Whole Genomes (PCAWG) encompasses the largest collection, to date, of uniformly-processed, cancer whole-genome sequencing data sets. While this dataset has the power to elucidate many cancer biology mechanisms, it also poses serious challenges for visualization tools because of its size and complexity. Here we describe five publicly available tools, each either designed or augmented to derive insights from this unique resource: The ICGC Data Portal, UCSC Xena, Expression Atlas, PCAWG-Scout, and Chromothripsis Explorer. Each of these web tools is designed to be user-friendly, putting sophisticated analyses in the hands of all researchers. Together, they enable researchers to dynamically query these complex genomics data, explore tumors' molecular landscapes, and integrate external information to facilitate data interpretation. More information on these tools and their capabilities is available from The PCAWG Landing Page (http://docs.icgc.org/pcawg).

Download data

  • Downloaded 1,638 times
  • Download rankings, all-time:
    • Site-wide: 3,582 out of 70,260
    • In bioinformatics: 716 out of 6,887
  • Year to date:
    • Site-wide: 55,155 out of 70,260
  • Since beginning of last month:
    • Site-wide: 21,354 out of 70,260

Altmetric data


Downloads over time

Distribution of downloads per paper, site-wide


PanLingua

Sign up for the Rxivist weekly newsletter! (Click here for more details.)


News