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Genome-wide analyses of behavioural traits biased by misreports and longitudinal changes

By Angli Xue, Londa Jiang, Zhihong Zhu, Naomi R. Wray, Peter M Visscher, Jian Zeng, Jian Yang

Posted 19 Jun 2020
medRxiv DOI: 10.1101/2020.06.15.20131284

Genome-wide association studies (GWAS) have discovered numerous genetic variants associated with human behavioural traits. However, behavioural traits are subject to misreports and longitudinal changes (MLC) which can cause biases in GWAS and follow-up analyses. Here, we demonstrate that individuals with higher disease burden in the UK Biobank (n=455,607) are more likely to misreport or reduce their alcohol consumption (AC) levels, and propose a correction procedure to mitigate the MLC-induced biases. The AC GWAS signals removed by the MLC corrections are enriched in metabolic/cardiovascular traits. Almost all the previously reported negative estimates of genetic correlations between AC and common diseases become positive/non-significant after the MLC corrections. We also observe MLC biases for smoking and physical activities in the UK Biobank. Our findings provide a plausible explanation of the controversy about the effects of AC on health outcomes and a caution for future analyses of self-reported behavioural traits in biobank data.

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