Author: Brandon Malone

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Preprints

Artificial intelligence predicts the immunogenic landscape of SARS-CoV-2: toward universal blueprints for vaccine designs

• Downloaded 2,508 times
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  • Site-wide: 6,336
  • In bioinformatics: 675
• Year to date:
  • Site-wide: 27,901
• Since beginning of last month:
  • Site-wide: 26,823

Time-resolved cryoEM using Spotiton

• Downloaded 1,815 times
• Download rankings, all-time:
  • Site-wide: 10,190
  • In biophysics: 214
• Year to date:
  • Site-wide: 42,195
• Since beginning of last month:
  • Site-wide: 66,428

Structural basis for helicase-polymerase coupling in the SARS-CoV-2 replication-transcription complex

• Downloaded 1,716 times
• Download rankings, all-time:
  • Site-wide: 11,078
  • In biophysics: 235
• Year to date:
  • Site-wide: 25,273
• Since beginning of last month:
  • Site-wide: 64,640

dom2vec: Unsupervised protein domain embeddings capture domains structure and function providing data-driven insights into collocations in domain architectures

• Downloaded 774 times
• Download rankings, all-time:
  • Site-wide: 35,395
  • In bioinformatics: 3,862
• Year to date:
  • Site-wide: 42,077
• Since beginning of last month:
  • Site-wide: 112,683

BERTMHC: Improves MHC-peptide class II interaction prediction with transformer and multiple instance learning

• Downloaded 717 times
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  • Site-wide: 39,392
  • In bioinformatics: 4,229
• Year to date:
  • Site-wide: 7,841
• Since beginning of last month:
  • Site-wide: 7,697

Structural basis for backtracking by the SARS-CoV-2 replication-transcription complex

• Downloaded 598 times
• Download rankings, all-time:
  • Site-wide: 49,741
  • In biochemistry: 1,276
• Year to date:
  • Site-wide: 6,820
• Since beginning of last month:
  • Site-wide: 67,111

DOUBLER: Unified Representation Learning of Biological Entities and Documents for Predicting Protein–Disease Relationships

• Downloaded 261 times
• Download rankings, all-time:
  • Site-wide: 107,935
  • In bioinformatics: 9,069
• Year to date:
  • Site-wide: 85,381
• Since beginning of last month:
  • Site-wide: 98,609

Structural origins of Escherichia coli RNA polymerase open promoter complex stability

• Downloaded 129 times
• Download rankings, all-time:
  • Site-wide: 139,371
  • In biophysics: 5,326
• Year to date:
  • Site-wide: 51,852
• Since beginning of last month:
  • Site-wide: 1,263