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Author: Huanming Yang

  • Most recently observed institution: 1.BGI-Shenzhen, Shenzhen 518083, China; 2.James D. Watson Institute of Genome Science, 310008 Hangzhou, China

Rankings

  • All-time downloads: 69,563 (rank: 1,730 out of 509,770)
  • Categories:
    • biochemistry: 176 (rank: 17,901 (tie) out of 21,433)
    • bioinformatics: 3,052 (rank: 3,796 out of 36,842)
    • cancer biology: 4,652 (rank: 508 (tie) out of 31,483)
    • cell biology: 5,950 (rank: 403 (tie) out of 33,868)
    • clinical trials: 1,011 (rank: 357 (tie) out of 1,036)
    • developmental biology: 2,257 (rank: 839 out of 17,402)
    • ecology: 685 (rank: 5,074 (tie) out of 19,249)
    • epidemiology: 541 (rank: 11,395 (tie) out of 23,904)
    • evolutionary biology: 1,210 (rank: 4,351 (tie) out of 22,171)
    • genetic and genomic medicine: 1,296 (rank: 781 (tie) out of 6,821)
    • genetics: 3,936 (rank: 4,139 out of 38,578)
    • genomics: 26,818 (rank: 307 out of 45,500)
    • immunology: 4,449 (rank: 1,148 out of 27,751)
    • infectious diseases: 1,956 (rank: 10,732 (tie) out of 32,342)
    • microbiology: 7,100 (rank: 1,470 out of 52,213)
    • molecular biology: 2,117 (rank: 1,570 out of 24,208)
    • neuroscience: 753 (rank: 25,407 (tie) out of 73,620)
    • synthetic biology: 690 (rank: 2,324 (tie) out of 4,554)
    • systems biology: 914 (rank: 4,045 (tie) out of 12,790)

Downloads per author, site-wide

Preprints

Efficient long single molecule sequencing for cost effective and accurate sequencing, haplotyping, and de novo assembly

genomics more details view paper
  • Downloaded 5,668 times
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    • Site-wide: 1,331 out of 118,180
    • In genomics: 142 out of 6,434
  • Year to date:
    • Site-wide: 9,166 out of 118,180
  • Since beginning of last month:
    • Site-wide: 14,339 out of 118,180

Single-cell atlas of a non-human primate reveals new pathogenic mechanisms of COVID-19

cell biology more details view paper
  • Downloaded 4,064 times
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    • Site-wide: 2,137 out of 118,180
    • In cell biology: 40 out of 5,416
  • Year to date:
    • Site-wide: 1,201 out of 118,180
  • Since beginning of last month:
    • Site-wide: 3,668 out of 118,180

Comprehensive analysis of immune evasion in breast cancer by single-cell RNA-seq

cancer biology more details view paper
  • Downloaded 3,460 times
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    • Site-wide: 2,688 out of 118,180
    • In cancer biology: 42 out of 3,742
  • Year to date:
    • Site-wide: 8,255 out of 118,180
  • Since beginning of last month:
    • Site-wide: 12,127 out of 118,180

Multiple approaches for massively parallel sequencing of HCoV-19 (SARS-CoV-2) genomes directly from clinical samples

genomics more details view paper
  • Downloaded 2,693 times
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    • Site-wide: 3,869 out of 118,180
    • In genomics: 474 out of 6,434
  • Year to date:
    • Site-wide: 1,881 out of 118,180
  • Since beginning of last month:
    • Site-wide: 11,195 out of 118,180

Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity

genomics more details view paper
  • Downloaded 2,487 times
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    • Site-wide: 4,374 out of 118,180
    • In genomics: 544 out of 6,434
  • Year to date:
    • Site-wide: 44,149 out of 118,180
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    • Site-wide: 50,874 out of 118,180

Chromosome level draft genomes of the fall armyworm, Spodoptera frugiperda (Lepidoptera: Noctuidae), an alien invasive pest in China

genomics more details view paper
  • Downloaded 2,369 times
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    • Site-wide: 4,700 out of 118,180
    • In genomics: 593 out of 6,434
  • Year to date:
    • Site-wide: 6,415 out of 118,180
  • Since beginning of last month:
    • Site-wide: 9,324 out of 118,180

A Single-Cell Immune Atlas of Triple Negative Breast Cancer Reveals Novel Immune Cell Subsets

immunology more details view paper
  • Downloaded 1,988 times
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    • Site-wide: 6,081 out of 118,180
    • In immunology: 148 out of 3,297
  • Year to date:
    • Site-wide: 7,164 out of 118,180
  • Since beginning of last month:
    • Site-wide: 9,205 out of 118,180

Single-cell screening of SARS-CoV-2 target cells in pets, livestock, poultry and wildlife

cell biology more details view paper
  • Downloaded 1,886 times
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    • Site-wide: 6,595 out of 118,180
    • In cell biology: 147 out of 5,416
  • Year to date:
    • Site-wide: 2,851 out of 118,180
  • Since beginning of last month:
    • Site-wide: 5,619 out of 118,180

Single-cell Transcriptomic Landscape of Nucleated Cells in Umbilical Cord Blood

genomics more details view paper
  • Downloaded 1,716 times
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    • Site-wide: 7,526 out of 118,180
    • In genomics: 889 out of 6,434
  • Year to date:
    • Site-wide: 28,610 out of 118,180
  • Since beginning of last month:
    • Site-wide: 48,552 out of 118,180

A multi-omic cohort as a reference point for promoting a healthy human gut microbiome

microbiology more details view paper
  • Downloaded 1,669 times
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    • Site-wide: 7,876 out of 118,180
    • In microbiology: 417 out of 9,341
  • Year to date:
    • Site-wide: 14,309 out of 118,180
  • Since beginning of last month:
    • Site-wide: 19,158 out of 118,180

Reliable Multiplex Sequencing with Rare Index Mis-Assignment on DNB-Based NGS Platform

genomics more details view paper
  • Downloaded 1,659 times
  • Download rankings, all-time:
    • Site-wide: 7,965 out of 118,180
    • In genomics: 947 out of 6,434
  • Year to date:
    • Site-wide: 32,809 out of 118,180
  • Since beginning of last month:
    • Site-wide: 39,544 out of 118,180

TET1 Modulates H4K16 Acetylation by Interacting with hMOF to Regulate Expression of DNA Repair Genes and Oncogenic Transformation

molecular biology more details view paper
  • Downloaded 1,537 times
  • Download rankings, all-time:
    • Site-wide: 8,951 out of 118,180
    • In molecular biology: 243 out of 3,617
  • Year to date:
    • Site-wide: 61,395 out of 118,180
  • Since beginning of last month:
    • Site-wide: 64,843 out of 118,180

Single-cell RNA-seq reveals dynamic transcriptome profiling in human early neural differentiation

developmental biology more details view paper
  • Downloaded 1,353 times
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    • Site-wide: 10,850 out of 118,180
    • In developmental biology: 167 out of 3,116
  • Year to date:
    • Site-wide: 30,223 out of 118,180
  • Since beginning of last month:
    • Site-wide: 25,188 out of 118,180

Initial Study of Human Genetic Contribution to COVID-19 Severity and Susceptibility

genetic and genomic medicine more details view paper
  • Downloaded 1,296 times
  • Download rankings, all-time:
    • Site-wide: 11,551 out of 118,180
    • In genetic and genomic medicine: 29 out of 481
  • Year to date:
    • Site-wide: 4,422 out of 118,180
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    • Site-wide: 2,995 out of 118,180

PIRD: Pan immune repertoire database

immunology more details view paper
  • Downloaded 1,282 times
  • Download rankings, all-time:
    • Site-wide: 11,735 out of 118,180
    • In immunology: 291 out of 3,297
  • Year to date:
    • Site-wide: 23,201 out of 118,180
  • Since beginning of last month:
    • Site-wide: 17,605 out of 118,180

A new massively parallel nanoball sequencing platform for whole exome research

genomics more details view paper
  • Downloaded 1,279 times
  • Download rankings, all-time:
    • Site-wide: 11,784 out of 118,180
    • In genomics: 1,351 out of 6,434
  • Year to date:
    • Site-wide: 26,428 out of 118,180
  • Since beginning of last month:
    • Site-wide: 76,476 out of 118,180

Circularization of genes and chromosome by CRISPR in human cells

genomics more details view paper
  • Downloaded 1,245 times
  • Download rankings, all-time:
    • Site-wide: 12,294 out of 118,180
    • In genomics: 1,395 out of 6,434
  • Year to date:
    • Site-wide: 67,644 out of 118,180
  • Since beginning of last month:
    • Site-wide: 58,166 out of 118,180

Recent origin of an XX/XY sex-determination system in the ancient plant lineage Ginkgo biloba

evolutionary biology more details view paper
  • Downloaded 1,210 times
  • Download rankings, all-time:
    • Site-wide: 12,831 out of 118,180
    • In evolutionary biology: 520 out of 6,187
  • Year to date:
    • Site-wide: 27,306 out of 118,180
  • Since beginning of last month:
    • Site-wide: 39,184 out of 118,180

A catalog of microbial genes from the bovine rumen unveils a specialized and diverse biomass-degrading environment

microbiology more details view paper
  • Downloaded 1,159 times
  • Download rankings, all-time:
    • Site-wide: 13,679 out of 118,180
    • In microbiology: 757 out of 9,341
  • Year to date:
    • Site-wide: 26,641 out of 118,180
  • Since beginning of last month:
    • Site-wide: 51,706 out of 118,180

Life history recorded in the vagino-cervical microbiome

microbiology more details view paper
  • Downloaded 1,089 times
  • Download rankings, all-time:
    • Site-wide: 14,977 out of 118,180
    • In microbiology: 822 out of 9,341
  • Year to date:
    • Site-wide: 28,254 out of 118,180
  • Since beginning of last month:
    • Site-wide: 30,543 out of 118,180

Initial data release and announcement of the Fish10K: Fish 10,000 Genomes Project

genomics more details view paper
  • Downloaded 1,075 times
  • Download rankings, all-time:
    • Site-wide: 15,252 out of 118,180
    • In genomics: 1,680 out of 6,434
  • Year to date:
    • Site-wide: 18,669 out of 118,180
  • Since beginning of last month:
    • Site-wide: 28,845 out of 118,180

The Trans-omics Landscape of COVID-19

infectious diseases more details view paper
  • Downloaded 1,038 times
  • Download rankings, all-time:
    • Site-wide: 16,095 out of 118,180
    • In infectious diseases: 1,280 out of 3,552
  • Year to date:
    • Site-wide: 5,717 out of 118,180
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    • Site-wide: 5,183 out of 118,180

Gene Panel Sequencing in a Chinese High-risk Breast Cancer Cohort

cancer biology more details view paper
  • Downloaded 1,029 times
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    • Site-wide: 16,308 out of 118,180
    • In cancer biology: 384 out of 3,742
  • Year to date:
    • Site-wide: 19,260 out of 118,180
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    • Site-wide: 19,111 out of 118,180

Fecal microbiota transplantation brings about bacterial strain displacement in patients with inflammatory bowel diseases

clinical trials more details view paper
  • Downloaded 1,011 times
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    • Site-wide: 16,737 out of 118,180
    • In clinical trials: 32 out of 99
  • Year to date:
    • Site-wide: 26,458 out of 118,180
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    • Site-wide: 28,607 out of 118,180

A Complete Public Domain Family Genomics Dataset

genomics more details view paper
  • Downloaded 982 times
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    • Site-wide: 17,498 out of 118,180
    • In genomics: 1,877 out of 6,434
  • Year to date:
    • Site-wide: 71,210 out of 118,180
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    • Site-wide: 68,989 out of 118,180

Over 50000 metagenomically assembled draft genomes for the human oral microbiome reveal new taxa

microbiology more details view paper
  • Downloaded 960 times
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    • Site-wide: 18,070 out of 118,180
    • In microbiology: 996 out of 9,341
  • Year to date:
    • Site-wide: 15,448 out of 118,180
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    • Site-wide: 26,635 out of 118,180

LFMD: detecting low-frequency mutations in high-depth genome sequencing data without molecular tags

bioinformatics more details view paper
  • Downloaded 926 times
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    • Site-wide: 19,066 out of 118,180
    • In bioinformatics: 2,393 out of 9,572
  • Year to date:
    • Site-wide: 24,456 out of 118,180
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    • Site-wide: 20,175 out of 118,180

Characterization of Microbial Co-infections in the Respiratory Tract of hospitalized COVID-19 patients

infectious diseases more details view paper
  • Downloaded 918 times
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    • Site-wide: 19,298 out of 118,180
    • In infectious diseases: 1,382 out of 3,552
  • Year to date:
    • Site-wide: 6,605 out of 118,180
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    • Site-wide: 13,496 out of 118,180

Massively parallel quantification of CRISPR editing in cells by TRAP-seq enables better design of Cas9, ABE, CBE gRNAs of high efficiency and accuracy

systems biology more details view paper
  • Downloaded 914 times
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    • Site-wide: 19,412 out of 118,180
    • In systems biology: 423 out of 2,634
  • Year to date:
    • Site-wide: 6,638 out of 118,180
  • Since beginning of last month:
    • Site-wide: 20,031 out of 118,180

Single-cell RNA-seq reveals distinct dynamic behavior of sex chromosomes during early human embryogenesis

developmental biology more details view paper
  • Downloaded 904 times
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    • Site-wide: 19,706 out of 118,180
    • In developmental biology: 375 out of 3,116
  • Year to date:
    • Site-wide: 28,787 out of 118,180
  • Since beginning of last month:
    • Site-wide: 33,234 out of 118,180

Intra-host Variation and Evolutionary Dynamics of SARS-CoV-2 Population in COVID-19 Patients

genomics more details view paper
  • Downloaded 841 times
  • Download rankings, all-time:
    • Site-wide: 21,922 out of 118,180
    • In genomics: 2,216 out of 6,434
  • Year to date:
    • Site-wide: 7,327 out of 118,180
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    • Site-wide: 21,507 out of 118,180

Integrated Analysis Revealed Hub Genes in Breast Cancer

bioinformatics more details view paper
  • Downloaded 823 times
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    • Site-wide: 22,646 out of 118,180
    • In bioinformatics: 2,796 out of 9,572
  • Year to date:
    • Site-wide: 51,882 out of 118,180
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    • Site-wide: 88,764 out of 118,180

Identification of gut microbiome markers for schizophrenia delineates a potential role of Streptococcus

microbiology more details view paper
  • Downloaded 770 times
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    • In microbiology: 1,418 out of 9,341
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    • Site-wide: 32,284 out of 118,180

Single-cell regulatory landscape and disease vulnerability map of adult Macaque cortex

neuroscience more details view paper
  • Downloaded 753 times
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    • Site-wide: 25,516 out of 118,180
    • In neuroscience: 3,507 out of 18,588
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    • Site-wide: 8,395 out of 118,180
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    • Site-wide: 16,958 out of 118,180

Enhance genome editing efficiency and specificity by a quick CRISPR/Cas9 system

genetics more details view paper
  • Downloaded 749 times
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    • Site-wide: 25,726 out of 118,180
    • In genetics: 1,332 out of 5,131
  • Year to date:
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    • Site-wide: 50,307 out of 118,180

The landscape of somatic mutation in sporadic Chinese colorectal cancer

genomics more details view paper
  • Downloaded 748 times
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    • In genomics: 2,492 out of 6,434
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    • Site-wide: 75,137 out of 118,180

Selective targeting of an oncogenic KRAS mutant allele by CRISPR/Cas9 induces efficient tumor regression

genetics more details view paper
  • Downloaded 723 times
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    • Site-wide: 27,036 out of 118,180
    • In genetics: 1,400 out of 5,131
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    • Site-wide: 24,782 out of 118,180

Age-dependent sexual dimorphism in the adult human gut microbiota

genomics more details view paper
  • Downloaded 713 times
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    • Site-wide: 27,590 out of 118,180
    • In genomics: 2,615 out of 6,434
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    • Site-wide: 54,606 out of 118,180

A chromosome-level genome of black rockfish, Sebastes schlegelii, provides insights into the evolution of live birth

genomics more details view paper
  • Downloaded 701 times
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    • In genomics: 2,659 out of 6,434
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    • Site-wide: 61,947 out of 118,180

Towards Practical and Robust DNA-based Data Archiving by Codec System Named ‘Yin-Yang’

synthetic biology more details view paper
  • Downloaded 690 times
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    • Site-wide: 28,888 out of 118,180
    • In synthetic biology: 389 out of 949
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    • Site-wide: 15,341 out of 118,180
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    • Site-wide: 23,460 out of 118,180

Draft genome sequence of the Solanum aethiopicum provides insights into disease resistance, drought tolerance and the evolution of the genome

genomics more details view paper
  • Downloaded 686 times
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    • Site-wide: 29,169 out of 118,180
    • In genomics: 2,716 out of 6,434
  • Year to date:
    • Site-wide: 72,123 out of 118,180
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    • Site-wide: 70,779 out of 118,180

The mitochondrial DNA content can not predict the embryo viability

ecology more details view paper
  • Downloaded 685 times
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    • In ecology: 675 out of 4,586
  • Year to date:
    • Site-wide: 46,853 out of 118,180
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    • Site-wide: 54,111 out of 118,180

Haplotype-Resolved Assembly for Synthetic Long Reads Using a Trio-Binning Strategy

bioinformatics more details view paper
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    • In bioinformatics: 3,944 out of 9,572
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    • Site-wide: 11,053 out of 118,180
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    • Site-wide: 21,426 out of 118,180

Calorie restriction intervention induces enterotype-associated BMI loss in nonobese individuals

microbiology more details view paper
  • Downloaded 596 times
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    • Site-wide: 34,981 out of 118,180
    • In microbiology: 2,081 out of 9,341
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    • Site-wide: 41,140 out of 118,180

Identification of Variable and Joining germline genes and alleles for Rhesus macaque from B-cell receptor repertoires

immunology more details view paper
  • Downloaded 595 times
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    • In immunology: 897 out of 3,297
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    • Site-wide: 64,322 out of 118,180

Dynamic chromosome rearrangements of the white-spotted bamboo shark shed light on cartilaginous fish diversification mechanisms

genomics more details view paper
  • Downloaded 593 times
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    • In genomics: 3,113 out of 6,434
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    • Site-wide: 22,972 out of 118,180

Intratumor Heterogeneity and Evolution of Colorectal Cancer

genetics more details view paper
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    • Site-wide: 37,985 out of 118,180

PALM-Seq: simultaneous sequencing of cell-free long RNA and small RNA

molecular biology more details view paper
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    • In molecular biology: 1,043 out of 3,617
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    • Site-wide: 27,565 out of 118,180

Genome Diversity in Ukraine

genomics more details view paper
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    • Site-wide: 11,051 out of 118,180

Time-series plasma cell-free DNA analysis reveals disease severity of COVID-19 patients

epidemiology more details view paper
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    • Site-wide: 13,221 out of 118,180

Nationwide population genetic screening improves outcomes of newborn screening for hearing loss in China

genetics more details view paper
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M-GWAS for the gut microbiome in Chinese adults illuminates on complex diseases

genetics more details view paper
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    • Site-wide: 25,818 out of 118,180

The female urinary microbiota in relation to the reproductive tract microbiota

microbiology more details view paper
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    • Site-wide: 31,890 out of 118,180

Distinct gut metagenomics and metaproteomics signatures in prediabetics and treatment-naïve type 2 diabetics

microbiology more details view paper
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    • Site-wide: 110,475 out of 118,180

Sequencing of the MHC region defines HLA-DQA1 as the major independent risk for anti-citrullinated protein antibodies (ACPA)-positive rheumatoid arthritis in Han population

genetics more details view paper
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    • Site-wide: 70,059 out of 118,180

Complete chloroplast genomes of 14 mangroves: phylogenetic and genomic comparative analyses

genomics more details view paper
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    • Site-wide: 53,579 out of 118,180

New genetic variants associated with major adverse cardiovascular events in patients with acute coronary syndromes and treated with clopidogrel and aspirin

genetics more details view paper
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The landscape and diagnostic potential of T and B cell repertoire in Immunoglobulin A Nephropathy

immunology more details view paper
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    • Site-wide: 75,691 out of 118,180

Recovered and dead outcome patients caused by influenza A (H7N9) virus infection show different pro-inflammatory cytokine dynamics during disease progress and its application in real-time prognosis

immunology more details view paper
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High-quality genome assembly and high-density genetic map of asparagus bean

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SOAPTyping: an open-source and cross-platform tool for Sanger sequence-based typing for HLA class I and II alleles

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WinnerTakeAlmostAll: A parsimony approach integrating multi-targets improves marker gene profiling

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Draft Genomes of two Artocarpus plants, Jackfruit (A. heterophyllus) and Breadfruit (A. altilis)

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Inter-determination of blood metabolite levels and gut microbiome supported by Mendelian randomization

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stLFRsv: a germline SV analysis pipeline using co-barcoded reads

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Comparative analysis of clonal evolution among patients with right-sided colon cancer, left-sided colon cancer and rectal cancer

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Personalized vagino-cervical microbiome dynamics after oral probiotics

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Lipidomic profiling of plasma extracellular vesicles as an effective means to evaluate the risk of preterm birth

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Reusable and Sensitive Detection Method for Exonuclease III Activity by DNB Nanoarrays Based on cPAS Sequencing Technology

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