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Author: Nathan D. Grubaugh

  • Most recently observed institution: Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT 06510, USA

Rankings

  • All-time downloads: 253,294 (rank: 138 )
  • Categories:
    • epidemiology: 127,415 (rank: 102 )
    • evolutionary biology: 2,141 (rank: 2,061 (tie) )
    • genomics: 4,632 (rank: 4,692 (tie) )
    • infectious diseases: 108,756 (rank: 245 )
    • microbiology: 1,722 (rank: 6,812 (tie) )
    • physiology: 1,115 (rank: 493 (tie) )
    • public and global health: 7,513 (rank: 553 (tie) )

Downloads per author, site-wide

Preprints

SARS-CoV-2 RNA concentrations in primary municipal sewage sludge as a leading indicator of COVID-19 outbreak dynamics

epidemiology more details view paper
  • Downloaded 125,046 times
  • Download rankings, all-time:
    • Site-wide: 28
    • In epidemiology: 8
  • Year to date:
    • Site-wide: 419
  • Since beginning of last month:
    • Site-wide: 250

Saliva is more sensitive for SARS-CoV-2 detection in COVID-19 patients than nasopharyngeal swabs

infectious diseases more details view paper
  • Downloaded 76,862 times
  • Download rankings, all-time:
    • Site-wide: 62
    • In infectious diseases: 24
  • Year to date:
    • Site-wide: 116
  • Since beginning of last month:
    • Site-wide: 224

Analytical sensitivity and efficiency comparisons of SARS-COV-2 qRT-PCR assays

infectious diseases more details view paper
  • Downloaded 22,491 times
  • Download rankings, all-time:
    • Site-wide: 264
    • In infectious diseases: 101
  • Year to date:
    • Site-wide: 356
  • Since beginning of last month:
    • Site-wide: 235

Coast-to-coast spread of SARS-CoV-2 in the United States revealed by genomic epidemiology

public and global health more details view paper
  • Downloaded 7,513 times
  • Download rankings, all-time:
    • Site-wide: 1,017
    • In public and global health: 42
  • Year to date:
    • Site-wide: 13,533
  • Since beginning of last month:
    • Site-wide: 12,785

Simply saliva: stability of SARS-CoV-2 detection negates the need for expensive collection devices

infectious diseases more details view paper
  • Downloaded 5,038 times
  • Download rankings, all-time:
    • Site-wide: 1,709
    • In infectious diseases: 394
  • Year to date:
    • Site-wide: 2,263
  • Since beginning of last month:
    • Site-wide: 691

Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples

genomics more details view paper
  • Downloaded 4,632 times
  • Download rankings, all-time:
    • Site-wide: 1,928
    • In genomics: 217
  • Year to date:
    • Site-wide: 13,210
  • Since beginning of last month:
    • Site-wide: 31,367

Single-Cell Omics Reveals Dyssynchrony of the Innate and Adaptive Immune System in Progressive COVID-19

infectious diseases more details view paper
  • Downloaded 3,436 times
  • Download rankings, all-time:
    • Site-wide: 2,975
    • In infectious diseases: 540
  • Year to date:
    • Site-wide: 2,822
  • Since beginning of last month:
    • Site-wide: 1,636

International travelers and genomics uncover a 'hidden' Zika outbreak

epidemiology more details view paper
  • Downloaded 1,300 times
  • Download rankings, all-time:
    • Site-wide: 12,499
    • In epidemiology: 815
  • Year to date:
    • Site-wide: 117,557
  • Since beginning of last month:
    • Site-wide: 66,814

An amplicon-based sequencing framework for accurately measuring intrahost virus diversity using PrimalSeq and iVar

evolutionary biology more details view paper
  • Downloaded 1,224 times
  • Download rankings, all-time:
    • Site-wide: 13,684
    • In evolutionary biology: 542
  • Year to date:
    • Site-wide: 91,010
  • Since beginning of last month:
    • Site-wide: 59,347

Common Piezo1 allele in African populations causes xerocytosis and attenuates Plasmodium infection

physiology more details view paper
  • Downloaded 1,115 times
  • Download rankings, all-time:
    • Site-wide: 15,729
    • In physiology: 43
  • Year to date:
    • Site-wide: 96,813
  • Since beginning of last month:
    • Site-wide: 73,425

Detection of SARS-CoV-2 RNA by multiplex RT-qPCR

microbiology more details view paper
  • Downloaded 1,096 times
  • Download rankings, all-time:
    • Site-wide: 16,146
    • In microbiology: 911
  • Year to date:
    • Site-wide: 14,905
  • Since beginning of last month:
    • Site-wide: 17,495

Phylogeographic and phylodynamic approaches to epidemiological hypothesis testing

evolutionary biology more details view paper
  • Downloaded 917 times
  • Download rankings, all-time:
    • Site-wide: 21,016
    • In evolutionary biology: 978
  • Year to date:
    • Site-wide: 42,742
  • Since beginning of last month:
    • Site-wide: 22,230

Genetic characterization of the Zika virus epidemic in the US Virgin Islands

epidemiology more details view paper
  • Downloaded 759 times
  • Download rankings, all-time:
    • Site-wide: 27,469
    • In epidemiology: 1,402
  • Year to date:
    • Site-wide: 111,641
  • Since beginning of last month:
    • Site-wide: 118,204

The Sensitivity of Respiratory Tract Specimens for the Detection of SARS-CoV-2: A Protocol for a Living Systematic Review and Meta-Analysis

infectious diseases more details view paper
  • Downloaded 543 times
  • Download rankings, all-time:
    • Site-wide: 42,663
    • In infectious diseases: 2,187
  • Year to date:
    • Site-wide: 44,109
  • Since beginning of last month:
    • Site-wide: 38,071

Adventitious viruses persistently infect three commonly used mosquito cell lines

microbiology more details view paper
  • Downloaded 507 times
  • Download rankings, all-time:
    • Site-wide: 46,229
    • In microbiology: 2,919
  • Year to date:
    • Site-wide: 67,920
  • Since beginning of last month:
    • Site-wide: 73,446

Host response-based screening to identify undiagnosed cases of COVID-19and expand testing capacity

infectious diseases more details view paper
  • Downloaded 386 times
  • Download rankings, all-time:
    • Site-wide: 61,947
    • In infectious diseases: 2,582
  • Year to date:
    • Site-wide: 70,572
  • Since beginning of last month:
    • Site-wide: 51,897

Asynchronicity of endemic and emerging mosquito-borne disease outbreaks in the Dominican Republic

epidemiology more details view paper
  • Downloaded 310 times
  • Download rankings, all-time:
    • Site-wide: 74,750
    • In epidemiology: 3,048
  • Year to date:
    • Site-wide: 56,265
  • Since beginning of last month:
    • Site-wide: 14,765

Two sides of a coin: a Zika virus mutation selected in pregnant rhesus macaques promotes fetal infection in mice but at a cost of reduced fitness in nonpregnant macaques and diminished transmissibility by vectors

microbiology more details view paper
  • Downloaded 119 times
  • Download rankings, all-time:
    • Site-wide: 112,896
    • In microbiology: 8,655
  • Year to date:
    • Site-wide: 51,605
  • Since beginning of last month:
    • Site-wide: 96,837

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