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Author: Nathan D. Grubaugh

  • Most recently observed institution: Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT 06510, USA

Rankings

  • All-time downloads: 264,185 (rank: 144 )
  • Categories:
    • epidemiology: 130,864 (rank: 105 )
    • evolutionary biology: 2,404 (rank: 2,096 (tie) )
    • genomics: 4,789 (rank: 5,168 (tie) )
    • infectious diseases: 114,987 (rank: 272 )
    • microbiology: 1,951 (rank: 7,609 (tie) )
    • physiology: 1,150 (rank: 687 (tie) )
    • public and global health: 8,040 (rank: 624 (tie) )

Downloads per author, site-wide

Preprints

SARS-CoV-2 RNA concentrations in primary municipal sewage sludge as a leading indicator of COVID-19 outbreak dynamics

epidemiology more details view paper
  • Downloaded 128,384 times
  • Download rankings, all-time:
    • Site-wide: 32
    • In epidemiology: 8
  • Year to date:
    • Site-wide: 434
  • Since beginning of last month:
    • Site-wide: 439

Saliva is more sensitive for SARS-CoV-2 detection in COVID-19 patients than nasopharyngeal swabs

infectious diseases more details view paper
  • Downloaded 79,615 times
  • Download rankings, all-time:
    • Site-wide: 64
    • In infectious diseases: 24
  • Year to date:
    • Site-wide: 437
  • Since beginning of last month:
    • Site-wide: 851

Analytical sensitivity and efficiency comparisons of SARS-COV-2 qRT-PCR assays

infectious diseases more details view paper
  • Downloaded 24,314 times
  • Download rankings, all-time:
    • Site-wide: 294
    • In infectious diseases: 105
  • Year to date:
    • Site-wide: 824
  • Since beginning of last month:
    • Site-wide: 1,369

Coast-to-coast spread of SARS-CoV-2 in the United States revealed by genomic epidemiology

public and global health more details view paper
  • Downloaded 8,040 times
  • Download rankings, all-time:
    • Site-wide: 1,164
    • In public and global health: 47
  • Year to date:
    • Site-wide: 5,209
  • Since beginning of last month:
    • Site-wide: 18,698

Simply saliva: stability of SARS-CoV-2 detection negates the need for expensive collection devices

infectious diseases more details view paper
  • Downloaded 5,780 times
  • Download rankings, all-time:
    • Site-wide: 1,804
    • In infectious diseases: 452
  • Year to date:
    • Site-wide: 2,916
  • Since beginning of last month:
    • Site-wide: 6,284

Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples

genomics more details view paper
  • Downloaded 4,789 times
  • Download rankings, all-time:
    • Site-wide: 2,330
    • In genomics: 238
  • Year to date:
    • Site-wide: 24,837
  • Since beginning of last month:
    • Site-wide: 24,679

Single-Cell Omics Reveals Dyssynchrony of the Innate and Adaptive Immune System in Progressive COVID-19

infectious diseases more details view paper
  • Downloaded 4,167 times
  • Download rankings, all-time:
    • Site-wide: 2,828
    • In infectious diseases: 596
  • Year to date:
    • Site-wide: 3,027
  • Since beginning of last month:
    • Site-wide: 3,628

An amplicon-based sequencing framework for accurately measuring intrahost virus diversity using PrimalSeq and iVar

evolutionary biology more details view paper
  • Downloaded 1,352 times
  • Download rankings, all-time:
    • Site-wide: 14,659
    • In evolutionary biology: 517
  • Year to date:
    • Site-wide: 35,509
  • Since beginning of last month:
    • Site-wide: 39,949

International travelers and genomics uncover a 'hidden' Zika outbreak

epidemiology more details view paper
  • Downloaded 1,326 times
  • Download rankings, all-time:
    • Site-wide: 15,068
    • In epidemiology: 996
  • Year to date:
    • Site-wide: 118,417
  • Since beginning of last month:
    • Site-wide: 100,033

Detection of SARS-CoV-2 RNA by multiplex RT-qPCR

microbiology more details view paper
  • Downloaded 1,269 times
  • Download rankings, all-time:
    • Site-wide: 16,104
    • In microbiology: 929
  • Year to date:
    • Site-wide: 22,580
  • Since beginning of last month:
    • Site-wide: 39,392

Common Piezo1 allele in African populations causes xerocytosis and attenuates Plasmodium infection

physiology more details view paper
  • Downloaded 1,150 times
  • Download rankings, all-time:
    • Site-wide: 18,676
    • In physiology: 54
  • Year to date:
    • Site-wide: 99,510
  • Since beginning of last month:
    • Site-wide: 88,848

Phylogeographic and phylodynamic approaches to epidemiological hypothesis testing

evolutionary biology more details view paper
  • Downloaded 1,052 times
  • Download rankings, all-time:
    • Site-wide: 21,266
    • In evolutionary biology: 883
  • Year to date:
    • Site-wide: 32,336
  • Since beginning of last month:
    • Site-wide: 37,794

Genetic characterization of the Zika virus epidemic in the US Virgin Islands

epidemiology more details view paper
  • Downloaded 784 times
  • Download rankings, all-time:
    • Site-wide: 32,347
    • In epidemiology: 1,662
  • Year to date:
    • Site-wide: 120,428
  • Since beginning of last month:
    • Site-wide: 96,720

The Sensitivity of Respiratory Tract Specimens for the Detection of SARS-CoV-2: A Protocol for a Living Systematic Review and Meta-Analysis

infectious diseases more details view paper
  • Downloaded 631 times
  • Download rankings, all-time:
    • Site-wide: 43,323
    • In infectious diseases: 2,690
  • Year to date:
    • Site-wide: 48,612
  • Since beginning of last month:
    • Site-wide: 47,720

Adventitious viruses persistently infect three commonly used mosquito cell lines

microbiology more details view paper
  • Downloaded 537 times
  • Download rankings, all-time:
    • Site-wide: 52,728
    • In microbiology: 3,339
  • Year to date:
    • Site-wide: 104,729
  • Since beginning of last month:
    • Site-wide: 94,639

Host response-based screening to identify undiagnosed cases of COVID-19and expand testing capacity

infectious diseases more details view paper
  • Downloaded 480 times
  • Download rankings, all-time:
    • Site-wide: 60,023
    • In infectious diseases: 3,129
  • Year to date:
    • Site-wide: 47,154
  • Since beginning of last month:
    • Site-wide: 52,682

Asynchronicity of endemic and emerging mosquito-borne disease outbreaks in the Dominican Republic

epidemiology more details view paper
  • Downloaded 370 times
  • Download rankings, all-time:
    • Site-wide: 77,848
    • In epidemiology: 3,279
  • Year to date:
    • Site-wide: 67,455
  • Since beginning of last month:
    • Site-wide: 49,622

Two sides of a coin: a Zika virus mutation selected in pregnant rhesus macaques promotes fetal infection in mice but at a cost of reduced fitness in nonpregnant macaques and diminished transmissibility by vectors

microbiology more details view paper
  • Downloaded 145 times
  • Download rankings, all-time:
    • Site-wide: 127,760
    • In microbiology: 9,667
  • Year to date:
    • Site-wide: 109,055
  • Since beginning of last month:
    • Site-wide: 86,697

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