Author: Erik N. Bergstrom

Downloads per author, site-wide

Preprints

The Repertoire of Mutational Signatures in Human Cancer

• Downloaded 20,552 times
• Download rankings, all-time:
  • Site-wide: 519
  • In cancer biology: 2
• Year to date:
  • Site-wide: 17,024
• Since beginning of last month:
  • Site-wide: 23,730

Uncovering novel mutational signatures by de novo extraction with SigProfilerExtractor

• Downloaded 2,695 times
• Download rankings, all-time:
  • Site-wide: 7,612
  • In bioinformatics: 1,144
• Year to date:
  • Site-wide: 1,841
• Since beginning of last month:
  • Site-wide: 2,145

The APOBEC3A deaminase drives episodic mutagenesis in cancer cells

• Downloaded 1,399 times
• Download rankings, all-time:
  • Site-wide: 20,354
  • In cancer biology: 611
• Year to date:
  • Site-wide: 9,426
• Since beginning of last month:
  • Site-wide: 4,398

Mutational signatures in esophageal squamous cell carcinoma from eight countries of varying incidence

• Downloaded 1,384 times
• Download rankings, all-time:
  • Site-wide: 20,719
  • In epidemiology: 1,646
• Year to date:
  • Site-wide: 6,345
• Since beginning of last month:
  • Site-wide: 4,100

Comprehensive analysis of clustered mutations in cancer reveals recurrent APOBEC3 mutagenesis of ecDNA

• Downloaded 843 times
• Download rankings, all-time:
  • Site-wide: 43,827
  • In cancer biology: 1,204
• Year to date:
  • Site-wide: 25,047
• Since beginning of last month:
  • Site-wide: 54,686

SigProfilerMatrixGenerator: a tool for visualizing and exploring patterns of small mutational events

• Downloaded 786 times
• Download rankings, all-time:
  • Site-wide: 48,590
  • In bioinformatics: 4,669
• Year to date:
  • Site-wide: 148,342
• Since beginning of last month:
  • Site-wide: 117,747

R-loop homeostasis and cancer mutagenesis promoted by the DNA cytosine deaminase APOBEC3B

• Downloaded 763 times
• Download rankings, all-time:
  • Site-wide: 50,686
  • In cancer biology: 2,139
• Year to date:
  • Site-wide: 8,571
• Since beginning of last month:
  • Site-wide: 11,130

Generating realistic null hypothesis of cancer mutational landscapes using SigProfilerSimulator

• Downloaded 550 times
• Download rankings, all-time:
  • Site-wide: 78,274
  • In genomics: 5,078
• Year to date:
  • Site-wide: 85,394
• Since beginning of last month:
  • Site-wide: 153,047

Examining clustered somatic mutations with SigProfilerClusters

• Downloaded 523 times
• Download rankings, all-time:
  • Site-wide: 83,196
  • In bioinformatics: None
• Year to date:
  • Site-wide: 4,668
• Since beginning of last month:
  • Site-wide: 13,082

Topography of mutational signatures in human cancer

• Downloaded 474 times
• Download rankings, all-time:
  • Site-wide: 93,182
  • In cancer biology: None
• Year to date:
  • Site-wide: 5,433
• Since beginning of last month:
  • Site-wide: 684