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Author: Susan Hopkins

Rankings

  • All-time downloads: 125,001 (rank: 1,042 )
  • Categories:
    • bioinformatics: 740 (rank: 23,028 (tie) )
    • epidemiology: 72,571 (rank: 258 )
    • geriatric medicine: 618 (rank: 255 (tie) )
    • infectious diseases: 48,928 (rank: 1,280 )
    • microbiology: 162 (rank: 65,598 (tie) )
    • public and global health: 1,982 (rank: 2,637 (tie) )

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Preprints

Effectiveness and durability of protection against future SARS-CoV-2 infection conferred by COVID-19 vaccination and previous infection; findings from the UK SIREN prospective cohort study of healthcare workers March 2020 to September 2021

epidemiology more details view paper

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Effectiveness of COVID-19 vaccines against the B.1.617.2 variant

epidemiology more details view paper
  • Downloaded 55,497 times
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    • Site-wide: 139
    • In epidemiology: 30
  • Year to date:
    • Site-wide: 41
  • Since beginning of last month:
    • Site-wide: 135

Transmission of SARS-CoV-2 Lineage B.1.1.7 in England: Insights from linking epidemiological and genetic data

infectious diseases more details view paper
  • Downloaded 17,920 times
  • Download rankings, all-time:
    • Site-wide: 512
    • In infectious diseases: 184
  • Year to date:
    • Site-wide: 155
  • Since beginning of last month:
    • Site-wide: 1,587

Do antibody positive healthcare workers have lower SARS-CoV-2 infection rates than antibody negative healthcare workers? Large multi-centre prospective cohort study (the SIREN study), England: June to November 2020

epidemiology more details view paper
  • Downloaded 13,671 times
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    • Site-wide: 724
    • In epidemiology: 104
  • Year to date:
    • Site-wide: 211
  • Since beginning of last month:
    • Site-wide: 993

Antibodies to SARS-CoV-2 are associated with protection against reinfection

infectious diseases more details view paper
  • Downloaded 10,994 times
  • Download rankings, all-time:
    • Site-wide: 968
    • In infectious diseases: 312
  • Year to date:
    • Site-wide: 1,107
  • Since beginning of last month:
    • Site-wide: 2,352

Increased infections, but not viral burden, with a new SARS-CoV-2 variant

infectious diseases more details view paper
  • Downloaded 8,497 times
  • Download rankings, all-time:
    • Site-wide: 1,328
    • In infectious diseases: 396
  • Year to date:
    • Site-wide: 356
  • Since beginning of last month:
    • Site-wide: 9,772

SARS-CoV-2 infectivity by viral load, S gene variants and demographic factors and the utility of lateral flow devices to prevent transmission

infectious diseases more details view paper
  • Downloaded 5,433 times
  • Download rankings, all-time:
    • Site-wide: 2,388
    • In infectious diseases: 605
  • Year to date:
    • Site-wide: 571
  • Since beginning of last month:
    • Site-wide: 6,316

An observational cohort study on the incidence of SARS-CoV-2 infection and B.1.1.7 variant infection in healthcare workers by antibody and vaccination status

infectious diseases more details view paper
  • Downloaded 3,676 times
  • Download rankings, all-time:
    • Site-wide: 4,096
    • In infectious diseases: 842
  • Year to date:
    • Site-wide: 884
  • Since beginning of last month:
    • Site-wide: 7,976

High prevalence of SARS-CoV-2 antibodies in care homes affected by COVID-19; a prospective cohort study in England

public and global health more details view paper
  • Downloaded 1,982 times
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    • Site-wide: 10,102
    • In public and global health: 257
  • Year to date:
    • Site-wide: 55,853
  • Since beginning of last month:
    • Site-wide: 131,872

SARS-CoV-2 infection in London, England: Impact of lockdown on community point-prevalence, March-May 2020

epidemiology more details view paper
  • Downloaded 788 times
  • Download rankings, all-time:
    • Site-wide: 40,318
    • In epidemiology: 2,065
  • Year to date:
    • Site-wide: 88,374
  • Since beginning of last month:
    • Site-wide: 69,439

A cluster randomised trial of the impact of a policy of daily testing for contacts of COVID-19 cases on attendance and COVID-19 transmission in English secondary schools and colleges

infectious diseases more details view paper
  • Downloaded 749 times
  • Download rankings, all-time:
    • Site-wide: 43,393
    • In infectious diseases: 3,085
  • Year to date:
    • Site-wide: 8,460
  • Since beginning of last month:
    • Site-wide: 5,066

Flanker: a tool for comparative genomics of gene flanking regions

bioinformatics more details view paper
  • Downloaded 740 times
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    • Site-wide: 44,144
    • In bioinformatics: 4,620
  • Year to date:
    • Site-wide: 8,615
  • Since beginning of last month:
    • Site-wide: 27,332

Snapshot PCR Surveillance for SARS-CoV-2 in Hospital Staff in England

infectious diseases more details view paper
  • Downloaded 652 times
  • Download rankings, all-time:
    • Site-wide: 52,611
    • In infectious diseases: 3,395
  • Year to date:
    • Site-wide: 90,402
  • Since beginning of last month:
    • Site-wide: 134,878

Healthcare-associated COVID-19 in England: a national data linkage study

infectious diseases more details view paper
  • Downloaded 622 times
  • Download rankings, all-time:
    • Site-wide: 56,035
    • In infectious diseases: 3,511
  • Year to date:
    • Site-wide: 11,364
  • Since beginning of last month:
    • Site-wide: 27,479

Risk factors associated with SARS-CoV-2 infection and outbreaks in Long Term Care Facilities in England: a national survey

geriatric medicine more details view paper
  • Downloaded 618 times
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    • Site-wide: 56,556
    • In geriatric medicine: 29
  • Year to date:
    • Site-wide: 38,503
  • Since beginning of last month:
    • Site-wide: 61,033

The acceptability of testing contacts of confirmed COVID-19 cases using serial, self-administered lateral flow devices as an alternative to self-isolation

epidemiology more details view paper
  • Downloaded 593 times
  • Download rankings, all-time:
    • Site-wide: 59,531
    • In epidemiology: 2,747
  • Year to date:
    • Site-wide: 12,224
  • Since beginning of last month:
    • Site-wide: 29,187

Monitoring populations at increased risk for SARS-CoV-2 infection in the community

epidemiology more details view paper
  • Downloaded 566 times
  • Download rankings, all-time:
    • Site-wide: 62,996
    • In epidemiology: 2,880
  • Year to date:
    • Site-wide: 13,137
  • Since beginning of last month:
    • Site-wide: 4,403

Modelling the effectiveness and social costs of daily lateral flow antigen tests versus quarantine in preventing onward transmission of COVID-19 from traced contacts

epidemiology more details view paper
  • Downloaded 516 times
  • Download rankings, all-time:
    • Site-wide: 70,563
    • In epidemiology: 3,142
  • Year to date:
    • Site-wide: 15,145
  • Since beginning of last month:
    • Site-wide: 10,786

Molecular epidemiology of Escherichia coli and Klebsiella species bloodstream infections in Oxfordshire (UK) 2008-2018

infectious diseases more details view paper
  • Downloaded 385 times
  • Download rankings, all-time:
    • Site-wide: 95,589
    • In infectious diseases: 4,567
  • Year to date:
    • Site-wide: 23,852
  • Since beginning of last month:
    • Site-wide: 52,429

Selection and co-selection of antibiotic resistances among Escherichia coli by antibiotic use in primary care: an ecological analysis

epidemiology more details view paper
  • Downloaded 355 times
  • Download rankings, all-time:
    • Site-wide: 102,510
    • In epidemiology: 4,375
  • Year to date:
    • Site-wide: 162,932
  • Since beginning of last month:
    • Site-wide: 162,641

An ecological comparison of hospital-level antibiotic use and mortality in 36,124,372 acute/general medicine inpatients in England

epidemiology more details view paper
  • Downloaded 296 times
  • Download rankings, all-time:
    • Site-wide: 117,380
    • In epidemiology: 4,963
  • Year to date:
    • Site-wide: 67,906
  • Since beginning of last month:
    • Site-wide: 47,092

When do big problems far away become smaller than the problems closer to home: Lessons for antimicrobial resistance from Father Ted

epidemiology more details view paper
  • Downloaded 289 times
  • Download rankings, all-time:
    • Site-wide: 119,259
    • In epidemiology: 5,062
  • Year to date:
    • Site-wide: 147,187
  • Since beginning of last month:
    • Site-wide: 107,753

Discordance between different bioinformatic methods for identifying resistance genes from short-read genomic data, with a focus on Escherichia coli

microbiology more details view paper
  • Downloaded 162 times
  • Download rankings, all-time:
    • Site-wide: 150,712
    • In microbiology: 11,371
  • Year to date:
    • Site-wide: 74,012
  • Since beginning of last month:
    • Site-wide: 7,586

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