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Author: Zhibin Ning

Rankings

  • All-time downloads: 7,301 (rank: 36,170 (tie) )
  • Categories:
    • biochemistry: 808 (rank: 8,874 (tie) )
    • bioinformatics: 1,811 (rank: 9,830 (tie) )
    • microbiology: 3,329 (rank: 5,493 (tie) )
    • systems biology: 1,353 (rank: 3,817 (tie) )

Downloads per author, site-wide

Preprints

RapidAIM: A culture- and metaproteomics-based Rapid Assay of Individual Microbiome responses to drugs

microbiology more details view paper
  • Downloaded 971 times
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    • Site-wide: 29,691
    • In microbiology: 1,736
  • Year to date:
    • Site-wide: 126,645
  • Since beginning of last month:
    • Site-wide: 138,011

Therapeutic Targeting of Casein Kinase 1δ/ε in an Alzheimer's Disease Mouse Model

biochemistry more details view paper
  • Downloaded 808 times
  • Download rankings, all-time:
    • Site-wide: 38,840
    • In biochemistry: 947
  • Year to date:
    • Site-wide: 38,322
  • Since beginning of last month:
    • Site-wide: 20,013

MetaLab 2.0 enables accurate post-translational modifications profiling in metaproteomics

bioinformatics more details view paper
  • Downloaded 654 times
  • Download rankings, all-time:
    • Site-wide: 52,191
    • In bioinformatics: 5,226
  • Year to date:
    • Site-wide: 64,733
  • Since beginning of last month:
    • Site-wide: 29,464

Growth phase-dependent responses of an in vitro gut microbiome to metformin

microbiology more details view paper
  • Downloaded 643 times
  • Download rankings, all-time:
    • Site-wide: 53,400
    • In microbiology: 3,294
  • Year to date:
    • Site-wide: 36,447
  • Since beginning of last month:
    • Site-wide: 67,745

A Chemoenzymatic Method for Glycoproteomic N-glycan Type Quantitation

systems biology more details view paper
  • Downloaded 565 times
  • Download rankings, all-time:
    • Site-wide: 62,950
    • In systems biology: 1,392
  • Year to date:
    • Site-wide: 62,400
  • Since beginning of last month:
    • Site-wide: 29,454

Metaproteomic responses of in vitro gut microbiomes to resistant starches: the role of resistant starch type and inter-individual variations

microbiology more details view paper
  • Downloaded 527 times
  • Download rankings, all-time:
    • Site-wide: 68,464
    • In microbiology: 4,405
  • Year to date:
    • Site-wide: 61,642
  • Since beginning of last month:
    • Site-wide: 95,165

pepFunk, a tool for peptide-centric functional analysis in metaproteomic human gut microbiome studies

bioinformatics more details view paper
  • Downloaded 511 times
  • Download rankings, all-time:
    • Site-wide: 71,007
    • In bioinformatics: 6,676
  • Year to date:
    • Site-wide: 53,427
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    • Site-wide: 36,892

MealTime-MS: A Machine Learning-Guided Real-Time Mass Spectrometry Analysis for Protein Identification and Efficient Dynamic Exclusion

bioinformatics more details view paper
  • Downloaded 479 times
  • Download rankings, all-time:
    • Site-wide: 76,378
    • In bioinformatics: 7,018
  • Year to date:
    • Site-wide: 43,025
  • Since beginning of last month:
    • Site-wide: 21,406

Deep characterization of the protein lysine acetylation in human gut microbiome and its alterations in patients with Crohn's disease

systems biology more details view paper
  • Downloaded 414 times
  • Download rankings, all-time:
    • Site-wide: 88,977
    • In systems biology: 1,972
  • Year to date:
    • Site-wide: 97,519
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    • Site-wide: 79,628

An in vitro model maintaining taxon-specific functional activities of the gut microbiome

microbiology more details view paper
  • Downloaded 402 times
  • Download rankings, all-time:
    • Site-wide: 91,452
    • In microbiology: 6,218
  • Year to date:
    • Site-wide: 157,820
  • Since beginning of last month:
    • Site-wide: 157,795

Studying the dynamics of the gut microbiota using metabolically stable isotopic labeling and metaproteomics.

microbiology more details view paper
  • Downloaded 363 times
  • Download rankings, all-time:
    • Site-wide: 100,449
    • In microbiology: 6,942
  • Year to date:
    • Site-wide: 115,483
  • Since beginning of last month:
    • Site-wide: 83,765

Revealing Protein-Level Functional Redundancy in the Human Gut Microbiome using Ultra-deep Metaproteomics

systems biology more details view paper
  • Downloaded 220 times
  • Download rankings, all-time:
    • Site-wide: 136,916
    • In systems biology: 2,905
  • Year to date:
    • Site-wide: 50,923
  • Since beginning of last month:
    • Site-wide: 112,575

Exploring the microbiome-wide lysine acetylation, succinylation and propionylation in human gut microbiota

microbiology more details view paper
  • Downloaded 189 times
  • Download rankings, all-time:
    • Site-wide: 144,444
    • In microbiology: 10,806
  • Year to date:
    • Site-wide: 92,734
  • Since beginning of last month:
    • Site-wide: 82,143

MetaProClust-MS1: A tool for clustering metaproteomes using rapid MS1 profiling

bioinformatics more details view paper
  • Downloaded 167 times
  • Download rankings, all-time:
    • Site-wide: 149,315
    • In bioinformatics: 11,386
  • Year to date:
    • Site-wide: 70,871
  • Since beginning of last month:
    • Site-wide: 24,794

Elevated colonic microbiota-associated paucimannosidic and truncated N-glycans in pediatric ulcerative colitis

systems biology more details view paper
  • Downloaded 154 times
  • Download rankings, all-time:
    • Site-wide: 151,892
    • In systems biology: 3,137
  • Year to date:
    • Site-wide: 76,981
  • Since beginning of last month:
    • Site-wide: 112,826

Examining the effects of an anti-Salmonella bacteriophage preparation, BAFASAL, on ex vivo human gut microbiome composition and function using a multi-omics approach

microbiology more details view paper
  • Downloaded 140 times
  • Download rankings, all-time:
    • Site-wide: 154,344
    • In microbiology: 11,753
  • Year to date:
    • Site-wide: 85,052
  • Since beginning of last month:
    • Site-wide: 127,456

Evaluating live microbiota biobanking using an ex vivo microbiome assay and metaproteomics

microbiology more details view paper
  • Downloaded 94 times
  • Download rankings, all-time:
    • Site-wide: 160,437
    • In microbiology: 12,350
  • Year to date:
    • Site-wide: 118,269
  • Since beginning of last month:
    • Site-wide: 17,501

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