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Author: Thushan I de Silva

Rankings

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    • bioinformatics: 1,404 (rank: 15,322 (tie) )
    • clinical trials: 1,472 (rank: 413 (tie) )
    • epidemiology: 263 (rank: 35,782 (tie) )
    • evolutionary biology: 256,143 (rank: 11 (tie) )
    • genetic and genomic medicine: 628 (rank: 9,887 (tie) )
    • genomics: 1,975 (rank: 16,019 (tie) )
    • hematology: 2,340 (rank: 172 (tie) )
    • hiv aids: 203 (rank: 1,852 (tie) )
    • immunology: 8,739 (rank: 1,787 )
    • infectious diseases: 15,173 (rank: 5,196 )
    • microbiology: 12,585 (rank: 1,861 )

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Preprints

Streptococcus pyogenes colonization in children aged 24-59 months in The Gambia: Impact of Live Attenuated Influenza Vaccine and associated serological responses

infectious diseases more details view paper

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EARLY ACQUISITION AND CARRIAGE OF GENETICALLY DIVERSE MULTI-DRUG RESISTANT GRAM-NEGATIVE BACILLI IN HOSPITALISED SMALL VULNERABLE NEWBORNS IN THE GAMBIA

infectious diseases more details view paper

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Spike mutation pipeline reveals the emergence of a more transmissible form of SARS-CoV-2

evolutionary biology more details view paper
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The SARS-CoV-2 variants associated with infections in India, B.1.617, show enhanced spike cleavage by furin

microbiology more details view paper
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Broad and strong memory CD4+ and CD8+ T cells induced by SARS-CoV-2 in UK convalescent COVID-19 patients.

immunology more details view paper
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Diagnosis of SARS-CoV-2 infection with LamPORE, a high-throughput platform combining loop-mediated isothermal amplification and nanopore sequencing

infectious diseases more details view paper
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T cell assays differentiate clinical and subclinical SARS-CoV-2 infections from cross-reactive antiviral responses

infectious diseases more details view paper
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Generation of a novel SARS-CoV-2 sub-genomic RNA due to the R203K/G204R variant in nucleocapsid: homologous recombination has potential to change SARS-CoV-2 at both protein and RNA level

microbiology more details view paper
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In-depth Analysis of Laboratory Parameters Reveals the Interplay Between Sex, Age and Systemic Inflammation in Individuals with COVID-19

hematology more details view paper
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Altered Sub-Genomic RNA Expression in SARS-CoV-2 B.1.1.7 Infections

genomics more details view paper
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Characterising within-hospital SARS-CoV-2 transmission events: a retrospective analysis integrating epidemiological and viral genomic data from a UK tertiary care setting across two pandemic waves

infectious diseases more details view paper
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Rapid feedback on hospital onset SARS-CoV-2 infections combining epidemiological and sequencing data

infectious diseases more details view paper
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Use of a pandemic H1N1 strain with updated haemagglutinin and neuraminidase results in increased nasopharyngeal shedding and improved immunogenicity to Russian-backbone live attenuated influenza vaccine among children aged 2 – 4 years old: an open label, prospective, observational, phase 4 study in The Gambia.

clinical trials more details view paper
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    • Site-wide: 146,431
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periscope: Sub-Genomic RNA Identification in SARS-CoV-2 Genomic Sequencing Data

bioinformatics more details view paper
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The impact of viral mutations on recognition by SARS-CoV-2 specific T-cells

immunology more details view paper
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    • Site-wide: 30,257
    • In immunology: 1,044
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Routine measurement of serum procalcitonin allows antibiotics to be safely withheld in patients admitted to hospital with SARS-CoV-2 infection.

infectious diseases more details view paper
  • Downloaded 1,150 times
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    • Site-wide: 30,977
    • In infectious diseases: 2,825
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Remdesivir induced viral RNA and subgenomic RNA suppression, and evolution of viral variants in SARS-CoV-2 infected patients.

infectious diseases more details view paper
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Evolution of long-term hybrid immunity in healthcare workers after different COVID-19 vaccination regimens: a longitudinal observational cohort study

infectious diseases more details view paper
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Nasal IgA wanes 9 months after hospitalisation with COVID-19 and is not induced by subsequent vaccination.

respiratory medicine more details view paper
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Genomic and epidemiological analysis of SARS-CoV-2 viruses in Sri Lanka

genetic and genomic medicine more details view paper
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    • In genetic and genomic medicine: 548
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Protocol for the COG-UK hospital onset COVID-19 infection (HOCI) multicentre interventional clinical study: evaluating the efficacy of rapid genome sequencing of SARS-CoV-2 in limiting the spread of COVID-19 in United Kingdom NHS hospitals

infectious diseases more details view paper
  • Downloaded 494 times
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    • Site-wide: 101,559
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Comparative genomic analysis of skin and soft tissue Streptococcus pyogenes isolates from low- and high-income settings

microbiology more details view paper
  • Downloaded 466 times
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    • In microbiology: 7,755
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Risk factors for SARS-CoV-2 seroprevalence following the first pandemic wave in UK healthcare workers in a large NHS Foundation Trust

infectious diseases more details view paper
  • Downloaded 429 times
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A high content microscopy-based platform for detecting antibodies to the nucleocapsid, spike and membrane proteins of SARS-CoV-2

infectious diseases more details view paper
  • Downloaded 332 times
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    • Site-wide: 144,944
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Outcome of COVID-19 in hospitalised immunocompromised patients: an analysis of the WHO ISARIC CCP-UK prospective cohort study.

infectious diseases more details view paper
  • Downloaded 296 times
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    • In infectious diseases: None
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The Consequences of Egg Adaptation in the H3N2 Component to the Immunogenicity of Live Attenuated Influenza Vaccine

immunology more details view paper
  • Downloaded 292 times
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High burden and seasonal variation of paediatric scabies and pyoderma prevalence in The Gambia: a cross-sectional study

epidemiology more details view paper
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Genomic and epidemiological evidence of a dominant Panton-Valentine leucocidin-positive Methicillin Resistant Staphylococcus aureus lineage in Sri Lanka with spread to the United Kingdom and Australia

microbiology more details view paper
  • Downloaded 256 times
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Impact of intra-partum Azithromycin on carriage of group A streptococcus in The Gambia: a posthoc analysis of a double-blind randomized placebo-controlled trial

infectious diseases more details view paper
  • Downloaded 242 times
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Intrahost evolution of the HIV-2 capsid correlates with progression to AIDS

hiv aids more details view paper
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    • In hiv aids: 200
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Circulation of respiratory viruses during the COVID-19 pandemic in The Gambia

epidemiology more details view paper
  • Downloaded 138 times
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How acceptable is rapid whole genome sequencing for infectious disease management in hospitals? Perspectives of those involved in managing nosocomial SARS-CoV-2

genetic and genomic medicine more details view paper
  • Downloaded 126 times
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Genomic epidemiology of SARS-CoV-2 infections in The Gambia, March 2020 to Jan 2022

epidemiology more details view paper
  • Downloaded 97 times
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