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Author: Damien J. Downes

Rankings

  • All-time downloads: 18,093 (rank: 13,302 )
  • Categories:
    • bioinformatics: 2,754 (rank: 6,170 (tie) )
    • cancer biology: 1,041 (rank: 10,810 (tie) )
    • developmental biology: 751 (rank: 8,018 (tie) )
    • genetics: 4,550 (rank: 4,356 (tie) )
    • genomics: 7,232 (rank: 3,387 )
    • molecular biology: 727 (rank: 11,268 (tie) )
    • systems biology: 1,038 (rank: 5,161 (tie) )

Downloads per author, site-wide

Preprints

DeepC: Predicting chromatin interactions using megabase scaled deep neural networks and transfer learning.

genomics more details view paper
  • Downloaded 3,445 times
  • Download rankings, all-time:
    • Site-wide: 4,517
    • In genomics: 448
  • Year to date:
    • Site-wide: 9,332
  • Since beginning of last month:
    • Site-wide: 15,714

An integrated platform to systematically identify causal variants and genes for polygenic human traits

genetics more details view paper
  • Downloaded 2,326 times
  • Download rankings, all-time:
    • Site-wide: 8,014
    • In genetics: 340
  • Year to date:
    • Site-wide: 13,547
  • Since beginning of last month:
    • Site-wide: 8,974

Enhancers predominantly regulate gene expression in vivo via transcription initiation.

genomics more details view paper
  • Downloaded 2,271 times
  • Download rankings, all-time:
    • Site-wide: 8,312
    • In genomics: 833
  • Year to date:
    • Site-wide: 21,450
  • Since beginning of last month:
    • Site-wide: 83,774

Single-cell chromatin interactions reveal regulatory hubs in dynamic compartmentalized domains

genetics more details view paper
  • Downloaded 1,727 times
  • Download rankings, all-time:
    • Site-wide: 12,463
    • In genetics: 534
  • Year to date:
    • Site-wide: 126,355
  • Since beginning of last month:
    • Site-wide: 109,664

LanceOtron: a deep learning peak caller for ATAC-seq, ChIP-seq, and DNase-seq

bioinformatics more details view paper
  • Downloaded 1,485 times
  • Download rankings, all-time:
    • Site-wide: 15,730
    • In bioinformatics: 1,775
  • Year to date:
    • Site-wide: 3,060
  • Since beginning of last month:
    • Site-wide: 6,359

Hypoxia induces transcriptional and translational downregulation of the type I interferon (IFN) pathway in multiple cancer cell types

cancer biology more details view paper
  • Downloaded 1,041 times
  • Download rankings, all-time:
    • Site-wide: 26,995
    • In cancer biology: 683
  • Year to date:
    • Site-wide: 20,029
  • Since beginning of last month:
    • Site-wide: 25,346

Absolute quantification of transcription factors reveals principles of gene regulation in erythropoiesis

systems biology more details view paper
  • Downloaded 1,038 times
  • Download rankings, all-time:
    • Site-wide: 27,131
    • In systems biology: 520
  • Year to date:
    • Site-wide: 44,109
  • Since beginning of last month:
    • Site-wide: 51,561

Targeted high-resolution chromosome conformation capture at genome-wide scale.

genomics more details view paper
  • Downloaded 881 times
  • Download rankings, all-time:
    • Site-wide: 34,461
    • In genomics: 2,887
  • Year to date:
    • Site-wide: 55,093
  • Since beginning of last month:
    • Site-wide: 75,462

CaptureCompendium: a comprehensive toolkit for 3C analysis.

bioinformatics more details view paper
  • Downloaded 864 times
  • Download rankings, all-time:
    • Site-wide: 35,466
    • In bioinformatics: 3,829
  • Year to date:
    • Site-wide: 18,059
  • Since beginning of last month:
    • Site-wide: 48,719

Dynamic Runx1 chromatin boundaries affect gene expression in hematopoietic development

developmental biology more details view paper
  • Downloaded 751 times
  • Download rankings, all-time:
    • Site-wide: 43,482
    • In developmental biology: 938
  • Year to date:
    • Site-wide: 8,561
  • Since beginning of last month:
    • Site-wide: 2,369

DOT1L inhibition reveals a distinct class of enhancers dependent on H3K79 methylation

molecular biology more details view paper
  • Downloaded 727 times
  • Download rankings, all-time:
    • Site-wide: 45,489
    • In molecular biology: 1,275
  • Year to date:
    • Site-wide: 140,007
  • Since beginning of last month:
    • Site-wide: 151,196

A functional overlap between actively transcribed genes and chromatin boundary elements

genomics more details view paper
  • Downloaded 635 times
  • Download rankings, all-time:
    • Site-wide: 54,675
    • In genomics: 4,057
  • Year to date:
    • Site-wide: 49,409
  • Since beginning of last month:
    • Site-wide: 47,017

Modelling erythropoiesis in congenital dyserythropoietic anaemia type I (CDA-I)

genetics more details view paper
  • Downloaded 497 times
  • Download rankings, all-time:
    • Site-wide: 73,927
    • In genetics: 3,126
  • Year to date:
    • Site-wide: 96,835
  • Since beginning of last month:
    • Site-wide: 109,943

Multi Locus View : An Extensible Web Based Tool for the Analysis of Genomic Data

bioinformatics more details view paper
  • Downloaded 405 times
  • Download rankings, all-time:
    • Site-wide: 91,625
    • In bioinformatics: 8,050
  • Year to date:
    • Site-wide: 77,932
  • Since beginning of last month:
    • Site-wide: 92,428

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