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Author: Dmitry Kobak

Rankings

  • All-time downloads: 59,349 (rank: 2,479 )
  • Categories:
    • bioinformatics: 18,614 (rank: 327 )
    • epidemiology: 26,875 (rank: 575 (tie) )
    • neuroscience: 13,860 (rank: 708 )

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Preprints

The World Mortality Dataset: Tracking excess mortality across countries during the COVID-19 pandemic

epidemiology more details view paper
  • Downloaded 26,875 times
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    • Site-wide: 255
    • In epidemiology: 50
  • Year to date:
    • Site-wide: 39
  • Since beginning of last month:
    • Site-wide: None

The art of using t-SNE for single-cell transcriptomics

bioinformatics more details view paper
  • Downloaded 10,935 times
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    • Site-wide: 773
    • In bioinformatics: 36
  • Year to date:
    • Site-wide: 9,976
  • Since beginning of last month:
    • Site-wide: 12,032

UMAP does not preserve global structure any better than t-SNE when using the same initialization

bioinformatics more details view paper
  • Downloaded 4,231 times
  • Download rankings, all-time:
    • Site-wide: 2,724
    • In bioinformatics: 234
  • Year to date:
    • Site-wide: 2,699
  • Since beginning of last month:
    • Site-wide: 3,245

A multimodal cell census and atlas of the mammalian primary motor cortex

neuroscience more details view paper
  • Downloaded 3,862 times
  • Download rankings, all-time:
    • Site-wide: 3,117
    • In neuroscience: 222
  • Year to date:
    • Site-wide: 1,873
  • Since beginning of last month:
    • Site-wide: 3,857

Phenotypic variation within and across transcriptomic cell types in mouse motor cortex

neuroscience more details view paper
  • Downloaded 3,683 times
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    • Site-wide: 3,346
    • In neuroscience: 252
  • Year to date:
    • Site-wide: 24,693
  • Since beginning of last month:
    • Site-wide: 19,558

Neocortical layer 4 in adult mouse differs in major cell types and circuit organization between primary sensory areas

neuroscience more details view paper
  • Downloaded 2,347 times
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    • Site-wide: 6,409
    • In neuroscience: 605
  • Year to date:
    • Site-wide: 38,784
  • Since beginning of last month:
    • Site-wide: 28,028

Sparse reduced-rank regression for exploratory visualization of paired multivariate datasets

bioinformatics more details view paper
  • Downloaded 1,807 times
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    • Site-wide: 9,411
    • In bioinformatics: 1,113
  • Year to date:
    • Site-wide: 9,053
  • Since beginning of last month:
    • Site-wide: 7,026

Analytic Pearson residuals for normalization of single-cell RNA-seq UMI data

bioinformatics more details view paper
  • Downloaded 1,641 times
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    • Site-wide: 10,831
    • In bioinformatics: 1,296
  • Year to date:
    • Site-wide: 2,780
  • Since beginning of last month:
    • Site-wide: 2,226

Cell type composition and circuit organization of neocortical radial clones

neuroscience more details view paper
  • Downloaded 1,422 times
  • Download rankings, all-time:
    • Site-wide: 13,409
    • In neuroscience: 1,514
  • Year to date:
    • Site-wide: 59,426
  • Since beginning of last month:
    • Site-wide: 45,795

Distinct organization of two cortico-cortical feedback pathways

neuroscience more details view paper
  • Downloaded 1,316 times
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    • Site-wide: 15,047
    • In neuroscience: 1,754
  • Year to date:
    • Site-wide: 28,696
  • Since beginning of last month:
    • Site-wide: 51,432

State-dependent geometry of population activity in rat auditory cortex

neuroscience more details view paper
  • Downloaded 755 times
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    • Site-wide: 33,633
    • In neuroscience: 4,560
  • Year to date:
    • Site-wide: 82,183
  • Since beginning of last month:
    • Site-wide: 73,587

Motor skill learning decreases motor variability and increases planning horizon

neuroscience more details view paper
  • Downloaded 475 times
  • Download rankings, all-time:
    • Site-wide: 59,849
    • In neuroscience: 8,833
  • Year to date:
    • Site-wide: 55,290
  • Since beginning of last month:
    • Site-wide: 73,864

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