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Author: Darren P Martin

  • ORCiD: http://orcid.org/0000-0002-8785-0870
  • Most recently observed institution: Institute of Infectious Diseases and Molecular Medicine, Department of Integrative Biomedical Sciences, Computational Biology Division, University of Cape Town; Cape Town, South Africa.

Rankings

  • All-time downloads: 65,800 (rank: 3,405 )
  • Categories:
    • bioinformatics: 1,443 (rank: 13,333 (tie) )
    • epidemiology: 38,011 (rank: 643 (tie) )
    • evolutionary biology: 10,387 (rank: 250 )
    • genetic and genomic medicine: 314 (rank: 13,052 (tie) )
    • hiv aids: 371 (rank: 771 (tie) )
    • immunology: 936 (rank: 16,253 (tie) )
    • infectious diseases: 7,637 (rank: 8,489 )
    • molecular biology: 919 (rank: 9,236 (tie) )
    • public and global health: 1,040 (rank: 5,267 (tie) )

Downloads per author, site-wide

Preprints

Emergence and rapid spread of a new severe acute respiratory syndrome-related coronavirus 2 (SARS-CoV-2) lineage with multiple spike mutations in South Africa

epidemiology more details view paper
  • Downloaded 37,655 times
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    • Site-wide: 254
    • In epidemiology: 56
  • Year to date:
    • Site-wide: 778
  • Since beginning of last month:
    • Site-wide: 1,233

Exploring the natural origins of SARS-CoV-2 in the light of recombination

evolutionary biology more details view paper
  • Downloaded 6,539 times
  • Download rankings, all-time:
    • Site-wide: 2,173
    • In evolutionary biology: 26
  • Year to date:
    • Site-wide: 6,391
  • Since beginning of last month:
    • Site-wide: 6,999

Selection analysis identifies unusual clustered mutational changes in Omicron lineage BA.1 that likely impact Spike function

evolutionary biology more details view paper
  • Downloaded 4,453 times
  • Download rankings, all-time:
    • Site-wide: 3,628
    • In evolutionary biology: 67
  • Year to date:
    • Site-wide: 191
  • Since beginning of last month:
    • Site-wide: 1,739

A novel variant of interest of SARS-CoV-2 with multiple spike mutations is identified from travel surveillance in Africa

infectious diseases more details view paper
  • Downloaded 2,984 times
  • Download rankings, all-time:
    • Site-wide: 6,400
    • In infectious diseases: 1,189
  • Year to date:
    • Site-wide: 36,366
  • Since beginning of last month:
    • Site-wide: 37,654

Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern Africa

infectious diseases more details view paper
  • Downloaded 2,871 times
  • Download rankings, all-time:
    • Site-wide: 6,762
    • In infectious diseases: 1,298
  • Year to date:
    • Site-wide: 945
  • Since beginning of last month:
    • Site-wide: 4,715

The evolving SARS-CoV-2 epidemic in Africa: Insights from rapidly expanding genomic surveillance.

epidemiology more details view paper
  • Downloaded 2,304 times
  • Download rankings, all-time:
    • Site-wide: 9,365
    • In epidemiology: None
  • Year to date:
    • Site-wide: 434
  • Since beginning of last month:
    • Site-wide: 73

Major new lineages of SARS-CoV-2 emerge and spread in South Africa during lockdown.

infectious diseases more details view paper
  • Downloaded 1,384 times
  • Download rankings, all-time:
    • Site-wide: 20,044
    • In infectious diseases: 2,160
  • Year to date:
    • Site-wide: 80,090
  • Since beginning of last month:
    • Site-wide: 117,960

Rapid replacement of the Beta variant by the Delta variant in South Africa

epidemiology more details view paper
  • Downloaded 1,176 times
  • Download rankings, all-time:
    • Site-wide: 25,775
    • In epidemiology: 1,656
  • Year to date:
    • Site-wide: 9,002
  • Since beginning of last month:
    • Site-wide: 15,947

A Novel and Expanding SARS-CoV-2 Variant, B.1.1.318, dominates infections in Mauritius

public and global health more details view paper
  • Downloaded 1,086 times
  • Download rankings, all-time:
    • Site-wide: 29,117
    • In public and global health: 589
  • Year to date:
    • Site-wide: 35,965
  • Since beginning of last month:
    • Site-wide: 33,745

Variable loss of antibody potency against SARS-CoV-2 B.1.1.529 (Omicron)

immunology more details view paper
  • Downloaded 1,025 times
  • Download rankings, all-time:
    • Site-wide: 31,678
    • In immunology: 1,153
  • Year to date:
    • Site-wide: 6,010
  • Since beginning of last month:
    • Site-wide: 18,612

Evolutionary analyses of base-pairing interactions in DNA and RNA secondary structures

molecular biology more details view paper
  • Downloaded 927 times
  • Download rankings, all-time:
    • Site-wide: 36,757
    • In molecular biology: 962
  • Year to date:
    • Site-wide: 148,537
  • Since beginning of last month:
    • Site-wide: 160,013

Capturing intrahost recombination of SARS-CoV-2 during superinfection with Alpha and Epsilon variants in New York City

infectious diseases more details view paper
  • Downloaded 796 times
  • Download rankings, all-time:
    • Site-wide: 45,838
    • In infectious diseases: 3,672
  • Year to date:
    • Site-wide: 1,815
  • Since beginning of last month:
    • Site-wide: 20,480

Freely accessible ready to use global infrastructure for SARS-CoV-2 monitoring

bioinformatics more details view paper
  • Downloaded 679 times
  • Download rankings, all-time:
    • Site-wide: 57,434
    • In bioinformatics: 5,510
  • Year to date:
    • Site-wide: 75,953
  • Since beginning of last month:
    • Site-wide: 120,193

Integrated Molecular Characterisation of the MAPK Pathways in Human Cancers

bioinformatics more details view paper
  • Downloaded 540 times
  • Download rankings, all-time:
    • Site-wide: 76,791
    • In bioinformatics: 6,922
  • Year to date:
    • Site-wide: 121,009
  • Since beginning of last month:
    • Site-wide: 86,211

HIV-1 evolutionary dynamics under non-suppressive antiretroviral therapy

hiv aids more details view paper
  • Downloaded 488 times
  • Download rankings, all-time:
    • Site-wide: 86,526
    • In hiv aids: 72
  • Year to date:
    • Site-wide: 22,770
  • Since beginning of last month:
    • Site-wide: 25,342

SARS-CoV-2 Genetic diversity and lineage dynamics of in Egypt

genetic and genomic medicine more details view paper
  • Downloaded 339 times
  • Download rankings, all-time:
    • Site-wide: 122,203
    • In genetic and genomic medicine: 758
  • Year to date:
    • Site-wide: 6,585
  • Since beginning of last month:
    • Site-wide: 29,052

RASCL: Rapid Assessment Of SARS-CoV-2 Clades Through Molecular Sequence Analysis

bioinformatics more details view paper
  • Downloaded 304 times
  • Download rankings, all-time:
    • Site-wide: 132,029
    • In bioinformatics: 10,813
  • Year to date:
    • Site-wide: 7,711
  • Since beginning of last month:
    • Site-wide: 70,196

Recent zoonotic spillover and tropism shift of a Canine Coronavirus is associated with relaxed selection and putative loss of function in NTD subdomain of spike protein.

evolutionary biology more details view paper
  • Downloaded 250 times
  • Download rankings, all-time:
    • Site-wide: 147,902
    • In evolutionary biology: 7,140
  • Year to date:
    • Site-wide: 39,093
  • Since beginning of last month:
    • Site-wide: 35,371

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