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Author: Timoth EA Peto

  • ORCiD: http://orcid.org/0000-0003-3477-8307
  • Most recently observed institution: University of Oxford, Oxford University Hospitals NHS Foundation Trust, Oxford Biomedical Research Centre, NIHR Health Protection Unit in Healthcare Associated Infections and Antimicrobial Resistance

Rankings

  • All-time downloads: 9,990 (rank: 25,919 (tie) )
  • Categories:
    • bioinformatics: 2,634 (rank: 6,511 (tie) )
    • epidemiology: 296 (rank: 28,222 (tie) )
    • genomics: 446 (rank: 42,653 (tie) )
    • infectious diseases: 392 (rank: 45,363 (tie) )
    • microbiology: 6,222 (rank: 2,775 )

Downloads per author, site-wide

Preprints

Genomic diversity affects the accuracy of bacterial SNP calling pipelines

bioinformatics more details view paper
  • Downloaded 2,338 times
  • Download rankings, all-time:
    • Site-wide: 7,934
    • In bioinformatics: 870
  • Year to date:
    • Site-wide: 28,944
  • Since beginning of last month:
    • Site-wide: 46,326

Same-day diagnostic and surveillance data for tuberculosis via whole genome sequencing of direct respiratory samples.

microbiology more details view paper
  • Downloaded 2,133 times
  • Download rankings, all-time:
    • Site-wide: 9,073
    • In microbiology: 537
  • Year to date:
    • Site-wide: 138,574
  • Since beginning of last month:
    • Site-wide: 154,738

Real-time analysis of nanopore-based metagenomic sequencing from orthopaedic device infection

microbiology more details view paper
  • Downloaded 1,925 times
  • Download rankings, all-time:
    • Site-wide: 10,575
    • In microbiology: 624
  • Year to date:
    • Site-wide: 124,714
  • Since beginning of last month:
    • Site-wide: 150,681

The impact of sequencing depth on the inferred taxonomic composition and AMR gene content of metagenomic samples

microbiology more details view paper
  • Downloaded 1,342 times
  • Download rankings, all-time:
    • Site-wide: 18,317
    • In microbiology: 1,062
  • Year to date:
    • Site-wide: 101,424
  • Since beginning of last month:
    • Site-wide: 155,714

Niche and local geography shape the pangenome of wastewater- and livestock-associated Enterobacteriaceae

microbiology more details view paper
  • Downloaded 822 times
  • Download rankings, all-time:
    • Site-wide: 38,103
    • In microbiology: 2,276
  • Year to date:
    • Site-wide: 55,907
  • Since beginning of last month:
    • Site-wide: 151,418

Metrics for Public Health Perspective Surveillance of Bacterial Antibiotic Resistance in Low- and Middle-Income Countries

genomics more details view paper
  • Downloaded 446 times
  • Download rankings, all-time:
    • Site-wide: 83,017
    • In genomics: 5,384
  • Year to date:
    • Site-wide: 88,839
  • Since beginning of last month:
    • Site-wide: 101,182

Antimicrobial resistance determinants are associated with Staphylococcus aureus bacteraemia and adaptation to the hospital environment: a bacterial genome-wide association study

infectious diseases more details view paper
  • Downloaded 392 times
  • Download rankings, all-time:
    • Site-wide: 94,163
    • In infectious diseases: 4,539
  • Year to date:
    • Site-wide: 23,322
  • Since beginning of last month:
    • Site-wide: 32,066

Phenotypically distinct human sequence is widespread in publicly archived microbial reads: an evaluation of methods for its detection

bioinformatics more details view paper
  • Downloaded 296 times
  • Download rankings, all-time:
    • Site-wide: 117,693
    • In bioinformatics: 9,651
  • Year to date:
    • Site-wide: 113,768
  • Since beginning of last month:
    • Site-wide: 105,566

An ecological comparison of hospital-level antibiotic use and mortality in 36,124,372 acute/general medicine inpatients in England

epidemiology more details view paper
  • Downloaded 296 times
  • Download rankings, all-time:
    • Site-wide: 117,556
    • In epidemiology: 4,967
  • Year to date:
    • Site-wide: 68,156
  • Since beginning of last month:
    • Site-wide: 47,823

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