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Author: Yvan Saeys

  • ORCiD: http://orcid.org/0000-0002-0415-1506
  • Most recently observed institution: Data Mining and Modelling for Biomedicine group, VIB Center for Inflammation Research, Ghent, Belgium; Department of Applied Mathematics, Computer Science, and Statistics, Ghent University, Ghent, Belgium

Rankings

  • All-time downloads: 29,752 (rank: 1,363 out of 361,769)
  • Categories:
    • bioengineering: 418 (rank: 4,786 (tie) out of 10,067)
    • bioinformatics: 22,122 (rank: 103 out of 31,271)
    • evolutionary biology: 1,913 (rank: 1,813 (tie) out of 18,767)
    • genetics: 1,517 (rank: 9,211 (tie) out of 33,967)
    • immunology: 3,782 (rank: 473 (tie) out of 18,775)

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Preprints

A comparison of single-cell trajectory inference methods: towards more accurate and robust tools

bioinformatics more details view paper
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    • In bioinformatics: 11 out of 8,053
  • Year to date:
    • Site-wide: 655 out of 84,017
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    • Site-wide: 868 out of 84,017

A cell atlas of human thymic development defines T cell repertoire formation

immunology more details view paper
  • Downloaded 3,049 times
  • Download rankings, all-time:
    • Site-wide: 1,639 out of 84,017
    • In immunology: 35 out of 2,351
  • Year to date:
    • Site-wide: 252 out of 84,017
  • Since beginning of last month:
    • Site-wide: 1,996 out of 84,017

SCORPIUS improves trajectory inference and identifies novel modules in dendritic cell development

bioinformatics more details view paper
  • Downloaded 2,805 times
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    • Site-wide: 1,911 out of 84,017
    • In bioinformatics: 349 out of 8,053
  • Year to date:
    • Site-wide: 3,465 out of 84,017
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    • Site-wide: 4,552 out of 84,017

Trajectory-based differential expression analysis for single-cell sequencing data

bioinformatics more details view paper
  • Downloaded 2,565 times
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    • Site-wide: 2,228 out of 84,017
    • In bioinformatics: 410 out of 8,053
  • Year to date:
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    • Site-wide: 3,260 out of 84,017

The CARD-CC/Bcl10/paracaspase signaling complex is functionally conserved since the last common ancestor of planulozoa.

evolutionary biology more details view paper
  • Downloaded 1,913 times
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    • Site-wide: 3,646 out of 84,017
    • In evolutionary biology: 151 out of 5,215
  • Year to date:
    • Site-wide: 22,718 out of 84,017
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    • Site-wide: 31,441 out of 84,017

The RNA Atlas, a single nucleotide resolution map of the human transcriptome

genetics more details view paper
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    • In genetics: 407 out of 4,416
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Single cell profiling of immature human postnatal thymocytes resolves the complexity of intra-thymic lineage differentiation and thymus seeding precursors.

immunology more details view paper
  • Downloaded 733 times
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    • In immunology: 383 out of 2,351
  • Year to date:
    • Site-wide: 1,541 out of 84,017
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    • Site-wide: 652 out of 84,017

Classification of human white blood cells using machine learning for stain-free imaging flow cytometry

bioinformatics more details view paper
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    • In bioinformatics: 3,039 out of 8,053
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    • Site-wide: 6,749 out of 84,017

dyngen: a multi-modal simulator for spearheading new single-cell omics analyses

bioinformatics more details view paper
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    • In bioinformatics: 4,325 out of 8,053
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    • Site-wide: 3,308 out of 84,017
  • Since beginning of last month:
    • Site-wide: 6,105 out of 84,017

Deterministic scRNA-seq of individual intestinal organoids reveals new subtypes and coexisting distinct stem cell pools

bioengineering more details view paper
  • Downloaded 418 times
  • Download rankings, all-time:
    • Site-wide: 36,016 out of 84,017
    • In bioengineering: 697 out of 1,832
  • Year to date:
    • Site-wide: 3,546 out of 84,017
  • Since beginning of last month:
    • Site-wide: 1,225 out of 84,017

A “Human-in-the-Loop” Approach for Semi-automated Image Restoration in Electron Microscopy

bioinformatics more details view paper
  • Downloaded 394 times
  • Download rankings, all-time:
    • Site-wide: 38,462 out of 84,017
    • In bioinformatics: 4,706 out of 8,053
  • Year to date:
    • Site-wide: 29,182 out of 84,017
  • Since beginning of last month:
    • Site-wide: 40,842 out of 84,017

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