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Author: Erich J Jarvis

Rankings

  • All-time downloads: 102,823 (rank: 2,062 )
  • Categories:
    • animal behavior and cognition: 415 (rank: 5,316 (tie) )
    • bioinformatics: 1,262 (rank: 16,956 (tie) )
    • cell biology: 425 (rank: 35,876 (tie) )
    • evolutionary biology: 341 (rank: 24,536 (tie) )
    • genetics: 1,829 (rank: 12,796 (tie) )
    • genomics: 87,478 (rank: 133 )
    • infectious diseases: 1,378 (rank: 30,287 (tie) )
    • neuroscience: 3,722 (rank: 8,788 (tie) )

Downloads per author, site-wide

Preprints

The complete sequence of a human genome

genomics more details view paper
  • Downloaded 56,320 times
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    • Site-wide: 171
    • In genomics: 3
  • Year to date:
    • Site-wide: 115
  • Since beginning of last month:
    • Site-wide: 176

Towards complete and error-free genome assemblies of all vertebrate species

genomics more details view paper
  • Downloaded 6,415 times
  • Download rankings, all-time:
    • Site-wide: 2,433
    • In genomics: 183
  • Year to date:
    • Site-wide: 16,107
  • Since beginning of last month:
    • Site-wide: 7,772

Extended haplotype phasing of de novo genome assemblies with FALCON-Phase

genomics more details view paper
  • Downloaded 5,111 times
  • Download rankings, all-time:
    • Site-wide: 3,314
    • In genomics: 288
  • Year to date:
    • Site-wide: 33,852
  • Since beginning of last month:
    • Site-wide: 33,718

A Draft Human Pangenome Reference

genomics more details view paper
  • Downloaded 5,107 times
  • Download rankings, all-time:
    • Site-wide: 3,317
    • In genomics: 566
  • Year to date:
    • Site-wide: 316
  • Since beginning of last month:
    • Site-wide: 202

Progressive alignment with Cactus: a multiple-genome aligner for the thousand-genome era

genomics more details view paper
  • Downloaded 4,234 times
  • Download rankings, all-time:
    • Site-wide: 4,294
    • In genomics: 388
  • Year to date:
    • Site-wide: 53,797
  • Since beginning of last month:
    • Site-wide: 56,454

Automated assembly of high-quality diploid human reference genomes

genomics more details view paper
  • Downloaded 3,049 times
  • Download rankings, all-time:
    • Site-wide: 6,955
    • In genomics: 783
  • Year to date:
    • Site-wide: 636
  • Since beginning of last month:
    • Site-wide: 2,119

Cell-type, single-cell, and spatial signatures of brain-region specific splicing in postnatal development

neuroscience more details view paper
  • Downloaded 2,523 times
  • Download rankings, all-time:
    • Site-wide: 9,154
    • In neuroscience: 825
  • Year to date:
    • Site-wide: 60,443
  • Since beginning of last month:
    • Site-wide: 132,850

Six new reference-quality bat genomes illuminate the molecular basis and evolution of bat adaptations

genomics more details view paper
  • Downloaded 2,514 times
  • Download rankings, all-time:
    • Site-wide: 9,199
    • In genomics: 869
  • Year to date:
    • Site-wide: 51,840
  • Since beginning of last month:
    • Site-wide: 52,471

De Novo PacBio long-read and phased avian genome assemblies correct and add to genes important in neuroscience research

genomics more details view paper
  • Downloaded 1,861 times
  • Download rankings, all-time:
    • Site-wide: 14,506
    • In genomics: 1,303
  • Year to date:
    • Site-wide: 116,015
  • Since beginning of last month:
    • Site-wide: 45,843

Benchmarking ultra-high molecular weight DNA preservation methods for long-read and long-range sequencing

genomics more details view paper
  • Downloaded 1,596 times
  • Download rankings, all-time:
    • Site-wide: 18,439
    • In genomics: 1,768
  • Year to date:
    • Site-wide: 7,401
  • Since beginning of last month:
    • Site-wide: 29,254

Host genome analysis of structural variations by Optical Genome Mapping provides clinically valuable insights into genes implicated in critical immune, viral infection, and viral replication pathways in patients with severe COVID-19.

infectious diseases more details view paper
  • Downloaded 1,431 times
  • Download rankings, all-time:
    • Site-wide: 21,906
    • In infectious diseases: 2,393
  • Year to date:
    • Site-wide: 62,332
  • Since beginning of last month:
    • Site-wide: 53,928

Reference genome and demographic history of the most endangered marine mammal, the vaquita

genomics more details view paper
  • Downloaded 1,282 times
  • Download rankings, all-time:
    • Site-wide: 26,089
    • In genomics: 2,214
  • Year to date:
    • Site-wide: 97,518
  • Since beginning of last month:
    • Site-wide: 84,567

Complete vertebrate mitogenomes reveal widespread gene duplications and repeats

genomics more details view paper
  • Downloaded 1,198 times
  • Download rankings, all-time:
    • Site-wide: 29,056
    • In genomics: 2,463
  • Year to date:
    • Site-wide: 82,970
  • Since beginning of last month:
    • Site-wide: 37,085

Oxytocin and vasotocin receptor variation sheds light into the evolution of human prosociality

genetics more details view paper
  • Downloaded 1,151 times
  • Download rankings, all-time:
    • Site-wide: 30,929
    • In genetics: 1,238
  • Year to date:
    • Site-wide: 74,101
  • Since beginning of last month:
    • Site-wide: 42,886

Widespread false gene gains caused by duplication errors in genome assemblies

genomics more details view paper
  • Downloaded 852 times
  • Download rankings, all-time:
    • Site-wide: 49,066
    • In genomics: 3,781
  • Year to date:
    • Site-wide: 52,886
  • Since beginning of last month:
    • Site-wide: 99,299

Merfin: improved variant filtering and polishing via k-mer validation

bioinformatics more details view paper
  • Downloaded 835 times
  • Download rankings, all-time:
    • Site-wide: 50,579
    • In bioinformatics: 5,291
  • Year to date:
    • Site-wide: 23,076
  • Since beginning of last month:
    • Site-wide: 40,609

Variation in predicted COVID-19 risk among lemurs and lorises

genetics more details view paper
  • Downloaded 743 times
  • Download rankings, all-time:
    • Site-wide: 60,000
    • In genetics: 2,350
  • Year to date:
    • Site-wide: 69,828
  • Since beginning of last month:
    • Site-wide: 101,354

Pangenomics provides insights into the role of synanthropy in barn swallow evolution

genomics more details view paper
  • Downloaded 688 times
  • Download rankings, all-time:
    • Site-wide: 67,010
    • In genomics: 5,473
  • Year to date:
    • Site-wide: 6,325
  • Since beginning of last month:
    • Site-wide: 7,998

A haplotype-resolved genome assembly of the Nile rat facilitates exploration of the genetic basis of diabetes

genomics more details view paper
  • Downloaded 631 times
  • Download rankings, all-time:
    • Site-wide: 75,457
    • In genomics: 5,441
  • Year to date:
    • Site-wide: 17,931
  • Since beginning of last month:
    • Site-wide: 22,028

False gene and chromosome losses affected by assembly and sequence errors

genomics more details view paper
  • Downloaded 629 times
  • Download rankings, all-time:
    • Site-wide: 75,730
    • In genomics: 5,284
  • Year to date:
    • Site-wide: 42,144
  • Since beginning of last month:
    • Site-wide: 58,676

Gfastats: conversion, evaluation and manipulation of genome sequences using assembly graphs

bioinformatics more details view paper
  • Downloaded 625 times
  • Download rankings, all-time:
    • Site-wide: 76,326
    • In bioinformatics: 8,220
  • Year to date:
    • Site-wide: 7,464
  • Since beginning of last month:
    • Site-wide: 17,299

Estrogen and sex-dependent loss of the vocal learning system in female zebra finches

neuroscience more details view paper
  • Downloaded 590 times
  • Download rankings, all-time:
    • Site-wide: 82,099
    • In neuroscience: 12,003
  • Year to date:
    • Site-wide: 91,518
  • Since beginning of last month:
    • Site-wide: 51,795

The swan genome and transcriptome: its not all black and white

genomics more details view paper
  • Downloaded 498 times
  • Download rankings, all-time:
    • Site-wide: 100,666
    • In genomics: 6,404
  • Year to date:
    • Site-wide: 10,796
  • Since beginning of last month:
    • Site-wide: 20,352

Analysis of Mouse Vocal Communication (AMVOC): A deep, unsupervised method for rapid detection, analysis, and classification of ultrasonic vocalizations

animal behavior and cognition more details view paper
  • Downloaded 470 times
  • Download rankings, all-time:
    • Site-wide: 107,073
    • In animal behavior and cognition: 1,185
  • Year to date:
    • Site-wide: 45,563
  • Since beginning of last month:
    • Site-wide: 75,720

Induction of an immortalized songbird cell line allows for gene characterization and knockout by CRISPR-Cas9

cell biology more details view paper
  • Downloaded 460 times
  • Download rankings, all-time:
    • Site-wide: 109,572
    • In cell biology: 5,100
  • Year to date:
    • Site-wide: 86,717
  • Since beginning of last month:
    • Site-wide: 173,527

A high-quality Genome and Comparison of Short versus Long Read Transcriptome of the Palaearctic duck Aythya fuligula (Tufted Duck)

genomics more details view paper
  • Downloaded 443 times
  • Download rankings, all-time:
    • Site-wide: 113,574
    • In genomics: 6,512
  • Year to date:
    • Site-wide: 86,520
  • Since beginning of last month:
    • Site-wide: 179,214

Recombination suppression and selection affect local ancestries in genomes of a migratory songbird

evolutionary biology more details view paper
  • Downloaded 420 times
  • Download rankings, all-time:
    • Site-wide: 119,619
    • In evolutionary biology: 6,197
  • Year to date:
    • Site-wide: 29,381
  • Since beginning of last month:
    • Site-wide: 21,853

As above, so below: Whole transcriptome profiling supports the continuum hypothesis of avian dorsal and ventral pallium organization

neuroscience more details view paper
  • Downloaded 331 times
  • Download rankings, all-time:
    • Site-wide: 145,253
    • In neuroscience: 21,541
  • Year to date:
    • Site-wide: 134,600
  • Since beginning of last month:
    • Site-wide: 109,489

A sex chromosome drives the emergence of vocal learning following hormonal manipulation in female zebra finches

neuroscience more details view paper
  • Downloaded 305 times
  • Download rankings, all-time:
    • Site-wide: 152,913
    • In neuroscience: 22,562
  • Year to date:
    • Site-wide: 114,835
  • Since beginning of last month:
    • Site-wide: 88,246

Species-wide genomics of kakapo provides transformational tools to accelerate recovery

genomics more details view paper
  • Downloaded 280 times
  • Download rankings, all-time:
    • Site-wide: 160,390
    • In genomics: None
  • Year to date:
    • Site-wide: 27,617
  • Since beginning of last month:
    • Site-wide: 1,076

Convergent gene expression highlights shared vocal motor microcircuitry in songbirds and humans

neuroscience more details view paper
  • Downloaded 231 times
  • Download rankings, all-time:
    • Site-wide: 174,060
    • In neuroscience: 27,662
  • Year to date:
    • Site-wide: 36,740
  • Since beginning of last month:
    • Site-wide: 16,270

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