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Author: David M. Gilbert

Rankings

  • All-time downloads: 34,632 (rank: 6,017 )
  • Categories:
    • bioinformatics: 2,086 (rank: 8,505 (tie) )
    • cancer biology: 607 (rank: 19,733 (tie) )
    • cell biology: 3,142 (rank: 2,057 (tie) )
    • genetics: 597 (rank: 26,267 (tie) )
    • genomics: 23,019 (rank: 574 )
    • molecular biology: 3,755 (rank: 1,251 (tie) )
    • synthetic biology: 562 (rank: 4,229 (tie) )
    • systems biology: 864 (rank: 6,228 (tie) )

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Preprints

An Integrative Framework For Detecting Structural Variations In Cancer Genomes

genomics more details view paper
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    • Site-wide: 3,343
    • In genomics: 326
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    • Site-wide: 70,104

Repli-seq: genome-wide analysis of replication timing by next-generation sequencing

genomics more details view paper
  • Downloaded 3,363 times
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    • Site-wide: 4,661
    • In genomics: 462
  • Year to date:
    • Site-wide: 31,940
  • Since beginning of last month:
    • Site-wide: 36,668

High throughput genome-wide single cell protein:DNA binding site mapping by targeted insertion of promoters (TIP-seq)

genomics more details view paper
  • Downloaded 3,083 times
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    • Site-wide: 5,260
    • In genomics: 518
  • Year to date:
    • Site-wide: 1,114
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    • Site-wide: 3,442

Cohesin depleted cells rebuild functional nuclear compartments after endomitosis

cell biology more details view paper
  • Downloaded 2,152 times
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    • Site-wide: 8,919
    • In cell biology: 190
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Identification of cis elements for spatio-temporal control of DNA replication

molecular biology more details view paper
  • Downloaded 1,899 times
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    • Site-wide: 10,781
    • In molecular biology: 280
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    • Site-wide: 100,876
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    • Site-wide: 134,035

Replication timing maintains the global epigenetic state in human cells.

molecular biology more details view paper
  • Downloaded 1,856 times
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    • Site-wide: 11,143
    • In molecular biology: 294
  • Year to date:
    • Site-wide: 15,172
  • Since beginning of last month:
    • Site-wide: 67,675

Cohesin-mediated loop anchors confine the location of human replication origins

genomics more details view paper
  • Downloaded 1,692 times
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    • Site-wide: 12,777
    • In genomics: 1,276
  • Year to date:
    • Site-wide: 2,459
  • Since beginning of last month:
    • Site-wide: 1,914

Genome-Wide Mapping of Human DNA Replication by Optical Replication Mapping Supports a Stochastic Model of Eukaryotic Replication

genomics more details view paper
  • Downloaded 1,571 times
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    • Site-wide: 14,281
    • In genomics: 1,410
  • Year to date:
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Joint annotation of chromatin state and chromatin conformation reveals relationships among domain types and identifies domains of cell type-specific expression

genomics more details view paper
  • Downloaded 1,494 times
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    • Site-wide: 15,501
    • In genomics: 1,512
  • Year to date:
    • Site-wide: 118,731
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    • Site-wide: 135,059

Local rewiring of genome - nuclear lamina interactions by transcription.

genomics more details view paper
  • Downloaded 1,435 times
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    • Site-wide: 16,516
    • In genomics: 1,590
  • Year to date:
    • Site-wide: 84,141
  • Since beginning of last month:
    • Site-wide: 70,028

An integrative ENCODE resource for cancer genomics

genomics more details view paper
  • Downloaded 1,391 times
  • Download rankings, all-time:
    • Site-wide: 17,322
    • In genomics: 1,653
  • Year to date:
    • Site-wide: 86,782
  • Since beginning of last month:
    • Site-wide: 108,236

Genome-Wide Identification of Early-Firing Human Replication Origins by Optical Replication Mapping

genomics more details view paper
  • Downloaded 1,369 times
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    • Site-wide: 17,756
    • In genomics: 1,696
  • Year to date:
    • Site-wide: 75,968
  • Since beginning of last month:
    • Site-wide: 82,060

Nuclear organisation and replication timing are coupled through RIF1-PP1 interaction

genomics more details view paper
  • Downloaded 1,269 times
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    • Site-wide: 19,846
    • In genomics: 1,857
  • Year to date:
    • Site-wide: 38,397
  • Since beginning of last month:
    • Site-wide: 61,086

SPIN reveals genome-wide landscape of nuclear compartmentalization

bioinformatics more details view paper
  • Downloaded 1,126 times
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    • Site-wide: 23,808
    • In bioinformatics: 2,672
  • Year to date:
    • Site-wide: 55,295
  • Since beginning of last month:
    • Site-wide: 54,870

Single-cell replication profiling reveals stochastic regulation of the mammalian replication-timing program.

genomics more details view paper
  • Downloaded 1,002 times
  • Download rankings, all-time:
    • Site-wide: 28,395
    • In genomics: 2,500
  • Year to date:
    • Site-wide: 150,465
  • Since beginning of last month:
    • Site-wide: 139,481

Allele-specific control of replication timing and genome organization during development

cell biology more details view paper
  • Downloaded 990 times
  • Download rankings, all-time:
    • Site-wide: 28,895
    • In cell biology: 1,080
  • Year to date:
    • Site-wide: 113,922
  • Since beginning of last month:
    • Site-wide: 142,794

Replication Timing Networks: a novel class of gene regulatory networks

systems biology more details view paper
  • Downloaded 864 times
  • Download rankings, all-time:
    • Site-wide: 35,221
    • In systems biology: 719
  • Year to date:
    • Site-wide: 111,171
  • Since beginning of last month:
    • Site-wide: 96,936

High Resolution Repli-Seq defines the temporal choreography of initiation, elonga-tion and termination of replication in mammalian cells

genomics more details view paper
  • Downloaded 776 times
  • Download rankings, all-time:
    • Site-wide: 41,138
    • In genomics: 3,286
  • Year to date:
    • Site-wide: 83,519
  • Since beginning of last month:
    • Site-wide: 113,817

Continuous-trait probabilistic model for comparing multi-species functional genomic data

bioinformatics more details view paper
  • Downloaded 614 times
  • Download rankings, all-time:
    • Site-wide: 56,951
    • In bioinformatics: 5,626
  • Year to date:
    • Site-wide: 150,778
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    • Site-wide: 143,193

Replication timing alterations in leukemia reflect stable clinically-relevant changes in genome architecture

cancer biology more details view paper
  • Downloaded 607 times
  • Download rankings, all-time:
    • Site-wide: 57,772
    • In cancer biology: 1,666
  • Year to date:
    • Site-wide: 82,326
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    • Site-wide: 56,975

Replication Timing and Transcription Identifies a Novel Fragility Signature Under Replication Stress

genetics more details view paper
  • Downloaded 597 times
  • Download rankings, all-time:
    • Site-wide: 58,944
    • In genetics: 2,503
  • Year to date:
    • Site-wide: 81,682
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    • Site-wide: 91,719

Catalytically Enhanced Cas9 through Directed Protein Evolution

synthetic biology more details view paper
  • Downloaded 562 times
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    • Site-wide: 63,573
    • In synthetic biology: 757
  • Year to date:
    • Site-wide: 52,339
  • Since beginning of last month:
    • Site-wide: 98,853

RT States: systematic annotation of the human genome using cell type-specific replication timing programs

bioinformatics more details view paper
  • Downloaded 346 times
  • Download rankings, all-time:
    • Site-wide: 104,565
    • In bioinformatics: 8,843
  • Year to date:
    • Site-wide: 131,491
  • Since beginning of last month:
    • Site-wide: 73,980

Dynamic chromosomal interactions and control of heterochromatin positioning by Ki67

genomics more details view paper
  • Downloaded 320 times
  • Download rankings, all-time:
    • Site-wide: 111,131
    • In genomics: 6,436
  • Year to date:
    • Site-wide: 31,185
  • Since beginning of last month:
    • Site-wide: 2,327

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