Rxivist logo

Author: James J Davis

Rankings

  • All-time downloads: 39,010 (rank: 5,613 )
  • Categories:
    • bioinformatics: 5,678 (rank: 2,581 (tie) )
    • genomics: 234 (rank: 53,031 (tie) )
    • microbiology: 497 (rank: 37,621 (tie) )
    • pathology: 32,601 (rank: 32 )

Downloads per author, site-wide

Preprints

Signals of significantly increased vaccine breakthrough, decreased hospitalization rates, and less severe disease in patients with COVID-19 caused by the Omicron variant of SARS-CoV-2 in Houston, Texas

pathology more details view paper

No download data for this paper yet.

Molecular Architecture of Early Disseminationand Massive Second Wave of the SARS-CoV-2 Virus in a Major Metropolitan Area

pathology more details view paper
  • Downloaded 15,375 times
  • Download rankings, all-time:
    • Site-wide: 670
    • In pathology: 5
  • Year to date:
    • Site-wide: 5,306
  • Since beginning of last month:
    • Site-wide: 9,082

Delta variants of SARS-CoV-2 cause significantly increased vaccine breakthrough COVID-19 cases in Houston, Texas

pathology more details view paper
  • Downloaded 12,218 times
  • Download rankings, all-time:
    • Site-wide: 904
    • In pathology: 8
  • Year to date:
    • Site-wide: 3,997
  • Since beginning of last month:
    • Site-wide: 1,996

Rapid, widespread, and preferential increase of SARS-CoV-2 B.1.1.7 variant in Houston, TX, revealed by 8,857 genome sequences

pathology more details view paper
  • Downloaded 2,511 times
  • Download rankings, all-time:
    • Site-wide: 7,478
    • In pathology: 43
  • Year to date:
    • Site-wide: 40,980
  • Since beginning of last month:
    • Site-wide: 34,826

Sequence Analysis of 20,453 SARS-CoV-2 Genomes from the Houston Metropolitan Area Identifies the Emergence and Widespread Distribution of Multiple Isolates of All Major Variants of Concern

pathology more details view paper
  • Downloaded 2,497 times
  • Download rankings, all-time:
    • Site-wide: 7,538
    • In pathology: 44
  • Year to date:
    • Site-wide: 8,014
  • Since beginning of last month:
    • Site-wide: 25,308

The DOE Systems Biology Knowledgebase (KBase)

bioinformatics more details view paper
  • Downloaded 1,826 times
  • Download rankings, all-time:
    • Site-wide: 11,987
    • In bioinformatics: 1,309
  • Year to date:
    • Site-wide: 114,255
  • Since beginning of last month:
    • Site-wide: 61,441

Panaconda: Application of pan-synteny graph models to genome content analysis

bioinformatics more details view paper
  • Downloaded 1,422 times
  • Download rankings, all-time:
    • Site-wide: 17,498
    • In bioinformatics: 1,950
  • Year to date:
    • Site-wide: 80,197
  • Since beginning of last month:
    • Site-wide: 71,699

Using machine learning to predict antimicrobial minimum inhibitory concentrations and associated genomic features for nontyphoidal Salmonella

bioinformatics more details view paper
  • Downloaded 1,332 times
  • Download rankings, all-time:
    • Site-wide: 19,319
    • In bioinformatics: 2,155
  • Year to date:
    • Site-wide: None
  • Since beginning of last month:
    • Site-wide: 103,127

Developing an in silico minimum inhibitory concentration panel test for Klebsiella pneumoniae

bioinformatics more details view paper
  • Downloaded 545 times
  • Download rankings, all-time:
    • Site-wide: 68,713
    • In bioinformatics: 6,502
  • Year to date:
    • Site-wide: 117,618
  • Since beginning of last month:
    • Site-wide: 155,664

Discovery and whole genome sequencing of a human clinical isolate of the novel species Klebsiella quasivariicola sp. nov.

microbiology more details view paper
  • Downloaded 497 times
  • Download rankings, all-time:
    • Site-wide: 76,605
    • In microbiology: 4,997
  • Year to date:
    • Site-wide: 128,778
  • Since beginning of last month:
    • Site-wide: 70,638

Predicting Antimicrobial Resistance Using Conserved Genes

bioinformatics more details view paper
  • Downloaded 385 times
  • Download rankings, all-time:
    • Site-wide: 99,483
    • In bioinformatics: 8,531
  • Year to date:
    • Site-wide: 150,417
  • Since beginning of last month:
    • Site-wide: 92,027

A Genome-based Model to Predict the Virulence of Pseudomonas aeruginosa Isolates

genomics more details view paper
  • Downloaded 234 times
  • Download rankings, all-time:
    • Site-wide: 138,850
    • In genomics: 7,354
  • Year to date:
    • Site-wide: 148,972
  • Since beginning of last month:
    • Site-wide: 164,353

PlasmidHostFinder: Prediction of plasmid hosts using random forest

bioinformatics more details view paper
  • Downloaded 168 times
  • Download rankings, all-time:
    • Site-wide: 154,963
    • In bioinformatics: 11,774
  • Year to date:
    • Site-wide: None
  • Since beginning of last month:
    • Site-wide: 36,275

PanLingua

News