Author: Daniel McDonald
- ORCiD: http://orcid.org/0000-0003-0876-9060
- Most recently observed institution: Department of Pediatrics, School of Medicine, University of California San Diego, La Jolla, CA, USA.
Rankings
- All-time downloads: 22,150 (rank: 5,991 out of 513,392)
- Categories:
- bioinformatics: 3,418 (rank: 3,324 (tie) out of 37,058)
- infectious diseases: 1,008 (rank: 15,658 (tie) out of 32,280)
- microbiology: 6,034 (rank: 1,655 (tie) out of 52,513)
- molecular biology: 10,963 (rank: 158 (tie) out of 24,289)
- systems biology: 727 (rank: 5,124 (tie) out of 12,917)
Downloads per author, site-wide
Preprints
Enabling high-accuracy long-read amplicon sequences using unique molecular identifiers with Nanopore or PacBio sequencing
molecular biology more details view paper- Downloaded 10,963 times
- Download rankings, all-time:
- Site-wide: 559 out of 119,064
- In molecular biology: 10 out of 3,634
- Year to date:
- Site-wide: 649 out of 119,064
- Since beginning of last month:
- Site-wide: 700 out of 119,064
American Gut: an Open Platform for Citizen-Science Microbiome Research
microbiology more details view paper- Downloaded 3,512 times
- Download rankings, all-time:
- Site-wide: 2,656 out of 119,064
- In microbiology: 179 out of 9,403
- Year to date:
- Site-wide: 17,157 out of 119,064
- Since beginning of last month:
- Site-wide: 9,634 out of 119,064
Chemically-informed Analyses of Metabolomics Mass Spectrometry Data with Qemistree
bioinformatics more details view paper- Downloaded 1,585 times
- Download rankings, all-time:
- Site-wide: 8,590 out of 119,064
- In bioinformatics: 1,116 out of 9,624
- Year to date:
- Site-wide: 3,530 out of 119,064
- Since beginning of last month:
- Site-wide: 3,791 out of 119,064
Bacterial modification of the host glycosaminoglycan heparan sulfate modulates SARS-CoV-2 infectivity
microbiology more details view paper- Downloaded 1,526 times
- Download rankings, all-time:
- Site-wide: 9,129 out of 119,064
- In microbiology: 483 out of 9,403
- Year to date:
- Site-wide: 3,708 out of 119,064
- Since beginning of last month:
- Site-wide: 2,424 out of 119,064
Species abundance information improves sequence taxonomy classification accuracy
bioinformatics more details view paper- Downloaded 1,021 times
- Download rankings, all-time:
- Site-wide: 16,607 out of 119,064
- In bioinformatics: 2,097 out of 9,624
- Year to date:
- Site-wide: 34,860 out of 119,064
- Since beginning of last month:
- Site-wide: 52,296 out of 119,064
Age and sex-dependent patterns of gut microbial diversity in human adults
microbiology more details view paper- Downloaded 996 times
- Download rankings, all-time:
- Site-wide: 17,266 out of 119,064
- In microbiology: 942 out of 9,403
- Year to date:
- Site-wide: 49,793 out of 119,064
- Since beginning of last month:
- Site-wide: 87,614 out of 119,064
Feasibility of SARS-CoV-2 virus detection from consumer-grade cotton swabs
infectious diseases more details view paper- Downloaded 745 times
- Download rankings, all-time:
- Site-wide: 26,143 out of 119,064
- In infectious diseases: 1,587 out of 3,623
- Year to date:
- Site-wide: 8,645 out of 119,064
- Since beginning of last month:
- Site-wide: 25,757 out of 119,064
Reference data based insights expand understanding of human metabolomes
systems biology more details view paper- Downloaded 727 times
- Download rankings, all-time:
- Site-wide: 27,074 out of 119,064
- In systems biology: 632 out of 2,652
- Year to date:
- Site-wide: 8,890 out of 119,064
- Since beginning of last month:
- Site-wide: 14,558 out of 119,064
Revisiting microbe-metabolite interactions: doing better than random
bioinformatics more details view paper- Downloaded 560 times
- Download rankings, all-time:
- Site-wide: 38,104 out of 119,064
- In bioinformatics: 4,262 out of 9,624
- Year to date:
- Site-wide: 27,033 out of 119,064
- Since beginning of last month:
- Site-wide: 36,395 out of 119,064
Microbial context predicts SARS-CoV-2 prevalence in patients and the hospital built environment
infectious diseases more details view paper- Downloaded 263 times
- Download rankings, all-time:
- Site-wide: 78,748 out of 119,064
- In infectious diseases: 2,670 out of 3,623
- Year to date:
- Site-wide: 31,387 out of 119,064
- Since beginning of last month:
- Site-wide: 1,162 out of 119,064
EMPress enables tree-guided, interactive, and exploratory analyses of multi-omic datasets
bioinformatics more details view paper- Downloaded 252 times
- Download rankings, all-time:
- Site-wide: 80,844 out of 119,064
- In bioinformatics: 7,401 out of 9,624
- Year to date:
- Site-wide: 33,182 out of 119,064
- Since beginning of last month:
- Site-wide: 29,884 out of 119,064
PanLingua
News
- 27 Nov 2020: The website and API now include results pulled from medRxiv as well as bioRxiv.
- 18 Dec 2019: We're pleased to announce PanLingua, a new tool that enables you to search for machine-translated bioRxiv preprints using more than 100 different languages.
- 21 May 2019: PLOS Biology has published a community page about Rxivist.org and its design.
- 10 May 2019: The paper analyzing the Rxivist dataset has been published at eLife.
- 1 Mar 2019: We now have summary statistics about bioRxiv downloads and submissions.
- 8 Feb 2019: Data from Altmetric is now available on the Rxivist details page for every preprint. Look for the "donut" under the download metrics.
- 30 Jan 2019: preLights has featured the Rxivist preprint and written about our findings.
- 22 Jan 2019: Nature just published an article about Rxivist and our data.
- 13 Jan 2019: The Rxivist preprint is live!