Author: Daniel McDonald
- ORCiD: http://orcid.org/0000-0003-0876-9060
- Most recently observed institution: Department of Pediatrics, School of Medicine, University of California San Diego, La Jolla, CA, USA.
Rankings
- All-time downloads: 25,002 (rank: 6,229 )
- Categories:
- bioinformatics: 3,798 (rank: 3,133 )
- infectious diseases: 1,549 (rank: 15,006 (tie) )
- microbiology: 6,539 (rank: 1,777 (tie) )
- molecular biology: 12,325 (rank: 153 (tie) )
- systems biology: 791 (rank: 5,181 (tie) )
Downloads per author, site-wide
Preprints
Enabling high-accuracy long-read amplicon sequences using unique molecular identifiers with Nanopore or PacBio sequencing
molecular biology more details view paper- Downloaded 12,325 times
- Download rankings, all-time:
- Site-wide: 557
- In molecular biology: 8
- Year to date:
- Site-wide: 714
- Since beginning of last month:
- Site-wide: None
American Gut: an Open Platform for Citizen-Science Microbiome Research
microbiology more details view paper- Downloaded 3,648 times
- Download rankings, all-time:
- Site-wide: 2,932
- In microbiology: 199
- Year to date:
- Site-wide: 14,200
- Since beginning of last month:
- Site-wide: 14,327
Bacterial modification of the host glycosaminoglycan heparan sulfate modulates SARS-CoV-2 infectivity
microbiology more details view paper- Downloaded 1,879 times
- Download rankings, all-time:
- Site-wide: 7,648
- In microbiology: 421
- Year to date:
- Site-wide: 3,680
- Since beginning of last month:
- Site-wide: 4,445
Chemically-informed Analyses of Metabolomics Mass Spectrometry Data with Qemistree
bioinformatics more details view paper- Downloaded 1,703 times
- Download rankings, all-time:
- Site-wide: 8,900
- In bioinformatics: 1,090
- Year to date:
- Site-wide: 13,832
- Since beginning of last month:
- Site-wide: 16,047
Species abundance information improves sequence taxonomy classification accuracy
bioinformatics more details view paper- Downloaded 1,033 times
- Download rankings, all-time:
- Site-wide: 18,815
- In bioinformatics: 2,266
- Year to date:
- Site-wide: None
- Since beginning of last month:
- Site-wide: None
Age and sex-dependent patterns of gut microbial diversity in human adults
microbiology more details view paper- Downloaded 1,012 times
- Download rankings, all-time:
- Site-wide: 19,383
- In microbiology: 1,090
- Year to date:
- Site-wide: 111,037
- Since beginning of last month:
- Site-wide: 105,461
Feasibility of SARS-CoV-2 virus detection from consumer-grade cotton swabs
infectious diseases more details view paper- Downloaded 831 times
- Download rankings, all-time:
- Site-wide: 25,666
- In infectious diseases: 1,805
- Year to date:
- Site-wide: 25,291
- Since beginning of last month:
- Site-wide: 22,905
Reference data based insights expand understanding of human metabolomes
systems biology more details view paper- Downloaded 791 times
- Download rankings, all-time:
- Site-wide: 27,465
- In systems biology: 602
- Year to date:
- Site-wide: 42,831
- Since beginning of last month:
- Site-wide: None
Microbial context predicts SARS-CoV-2 prevalence in patients and the hospital built environment
infectious diseases more details view paper- Downloaded 718 times
- Download rankings, all-time:
- Site-wide: 31,429
- In infectious diseases: 2,006
- Year to date:
- Site-wide: 4,729
- Since beginning of last month:
- Site-wide: 7,633
Revisiting microbe-metabolite interactions: doing better than random
bioinformatics more details view paper- Downloaded 597 times
- Download rankings, all-time:
- Site-wide: 40,101
- In bioinformatics: 4,377
- Year to date:
- Site-wide: 44,392
- Since beginning of last month:
- Site-wide: 43,548
EMPress enables tree-guided, interactive, and exploratory analyses of multi-omic datasets
bioinformatics more details view paper- Downloaded 465 times
- Download rankings, all-time:
- Site-wide: 53,908
- In bioinformatics: 5,535
- Year to date:
- Site-wide: 11,398
- Since beginning of last month:
- Site-wide: 11,563
PanLingua
News
- 27 Nov 2020: The website and API now include results pulled from medRxiv as well as bioRxiv.
- 18 Dec 2019: We're pleased to announce PanLingua, a new tool that enables you to search for machine-translated bioRxiv preprints using more than 100 different languages.
- 21 May 2019: PLOS Biology has published a community page about Rxivist.org and its design.
- 10 May 2019: The paper analyzing the Rxivist dataset has been published at eLife.
- 1 Mar 2019: We now have summary statistics about bioRxiv downloads and submissions.
- 8 Feb 2019: Data from Altmetric is now available on the Rxivist details page for every preprint. Look for the "donut" under the download metrics.
- 30 Jan 2019: preLights has featured the Rxivist preprint and written about our findings.
- 22 Jan 2019: Nature just published an article about Rxivist and our data.
- 13 Jan 2019: The Rxivist preprint is live!