Author: Edwin Cuppen
- ORCiD: http://orcid.org/0000-0002-0400-9542
- Most recently observed institution: Hartwig Medical Foundation
Rankings
- All-time downloads: 42,047 (rank: 3,159 )
- Categories:
- bioinformatics: 4,905 (rank: 2,304 )
- cancer biology: 16,886 (rank: 65 (tie) )
- cell biology: 9,112 (rank: 298 )
- developmental biology: 564 (rank: 7,577 (tie) )
- genetic and genomic medicine: 1,168 (rank: 1,358 )
- genomics: 7,712 (rank: 2,627 )
- molecular biology: 1,206 (rank: 4,254 (tie) )
- oncology: 494 (rank: 906 (tie) )
Downloads per author, site-wide
Preprints
Pan-cancer whole genome analyses of metastatic solid tumors
cancer biology more details view paper- Downloaded 5,844 times
- Download rankings, all-time:
- Site-wide: 1,493
- In cancer biology: 18
- Year to date:
- Site-wide: 34,683
- Since beginning of last month:
- Site-wide: 34,683
Long-term expanding human airway organoids for disease modelling.
cell biology more details view paper- Downloaded 5,478 times
- Download rankings, all-time:
- Site-wide: 1,641
- In cell biology: 22
- Year to date:
- Site-wide: 17,482
- Since beginning of last month:
- Site-wide: 17,482
SARS-CoV-2 Productively Infects Human Gut Enterocytes
cell biology more details view paper- Downloaded 3,634 times
- Download rankings, all-time:
- Site-wide: 2,925
- In cell biology: 50
- Year to date:
- Site-wide: 15,577
- Since beginning of last month:
- Site-wide: 15,577
Tumor mutational landscape is a record of the pre-malignant state
genomics more details view paper- Downloaded 3,455 times
- Download rankings, all-time:
- Site-wide: 3,155
- In genomics: 363
- Year to date:
- Site-wide: 20,150
- Since beginning of last month:
- Site-wide: 20,150
A deep learning system can accurately classify primary and metastatic cancers based on patterns of passenger mutations
cancer biology more details view paper- Downloaded 3,170 times
- Download rankings, all-time:
- Site-wide: 3,568
- In cancer biology: 55
- Year to date:
- Site-wide: 44,566
- Since beginning of last month:
- Site-wide: 44,566
MutationalPatterns: comprehensive genome-wide analysis of mutational processes
bioinformatics more details view paper- Downloaded 2,677 times
- Download rankings, all-time:
- Site-wide: 4,521
- In bioinformatics: 499
- Year to date:
- Site-wide: 36,458
- Since beginning of last month:
- Site-wide: 36,458
Mapping And Phasing Of Structural Variation In Patient Genomes Using Nanopore Sequencing
genomics more details view paper- Downloaded 2,471 times
- Download rankings, all-time:
- Site-wide: 5,100
- In genomics: 601
- Year to date:
- Site-wide: 111,320
- Since beginning of last month:
- Site-wide: 111,320
Pan-cancer landscape of homologous recombination deficiency
cancer biology more details view paper- Downloaded 2,401 times
- Download rankings, all-time:
- Site-wide: 5,322
- In cancer biology: 81
- Year to date:
- Site-wide: 4,460
- Since beginning of last month:
- Site-wide: 4,460
Learning mutational signatures and their multidimensional genomic properties with TensorSignatures
cancer biology more details view paper- Downloaded 1,988 times
- Download rankings, all-time:
- Site-wide: 6,957
- In cancer biology: 113
- Year to date:
- Site-wide: 5,400
- Since beginning of last month:
- Site-wide: 5,400
The genomic landscape of metastatic castration-resistant prostate cancers reveals multiple distinct genotypes with potential clinical impact
cancer biology more details view paper- Downloaded 1,812 times
- Download rankings, all-time:
- Site-wide: 8,006
- In cancer biology: 139
- Year to date:
- Site-wide: 22,632
- Since beginning of last month:
- Site-wide: 22,632
GRIDSS, PURPLE, LINX: Unscrambling the tumor genome via integrated analysis of structural variation and copy number
bioinformatics more details view paper- Downloaded 1,730 times
- Download rankings, all-time:
- Site-wide: 8,620
- In bioinformatics: 1,057
- Year to date:
- Site-wide: 12,327
- Since beginning of last month:
- Site-wide: 12,327
Deficiency of nucleotide excision repair explains mutational signature observed in cancer
molecular biology more details view paper- Downloaded 1,206 times
- Download rankings, all-time:
- Site-wide: 14,765
- In molecular biology: 414
- Year to date:
- Site-wide: 66,115
- Since beginning of last month:
- Site-wide: 66,115
5-Fluorouracil treatment induces characteristic T>G mutations in human cancer
cancer biology more details view paper- Downloaded 615 times
- Download rankings, all-time:
- Site-wide: 38,377
- In cancer biology: 1,046
- Year to date:
- Site-wide: 108,358
- Since beginning of last month:
- Site-wide: 108,358
Sperm DNA damage causes genomic instability in early embryonic development
developmental biology more details view paper- Downloaded 564 times
- Download rankings, all-time:
- Site-wide: 42,735
- In developmental biology: 1,002
- Year to date:
- Site-wide: 121,135
- Since beginning of last month:
- Site-wide: 121,135
Mutational impact of culturing human pluripotent and adult stem cells
genomics more details view paper- Downloaded 519 times
- Download rankings, all-time:
- Site-wide: 47,251
- In genomics: 3,801
- Year to date:
- Site-wide: 76,279
- Since beginning of last month:
- Site-wide: 76,279
GRIDSS2: comprehensive characterisation of somatic structural variation using single breakend variants and structural variant phasing
bioinformatics more details view paper- Downloaded 498 times
- Download rankings, all-time:
- Site-wide: 49,659
- In bioinformatics: 5,161
- Year to date:
- Site-wide: 27,928
- Since beginning of last month:
- Site-wide: 27,928
Patient-derived ovarian cancer organoids mimic clinical response and exhibit heterogeneous inter- and intrapatient drug responses
oncology more details view paper- Downloaded 494 times
- Download rankings, all-time:
- Site-wide: 50,133
- In oncology: 52
- Year to date:
- Site-wide: 59,556
- Since beginning of last month:
- Site-wide: 59,556
Micro-costing Diagnostics in Oncology: From Single-Gene Testing to Whole Genome Sequencing
genetic and genomic medicine more details view paper- Downloaded 484 times
- Download rankings, all-time:
- Site-wide: 51,285
- In genetic and genomic medicine: 149
- Year to date:
- Site-wide: 23,827
- Since beginning of last month:
- Site-wide: 23,827
A multi-platform reference for somatic structural variation detection
genomics more details view paper- Downloaded 449 times
- Download rankings, all-time:
- Site-wide: 55,726
- In genomics: 4,244
- Year to date:
- Site-wide: 8,796
- Since beginning of last month:
- Site-wide: 8,796
Early divergence of mutational mechanisms drives genetic heterogeneity of fetal tissues
genomics more details view paper- Downloaded 443 times
- Download rankings, all-time:
- Site-wide: 56,496
- In genomics: 4,277
- Year to date:
- Site-wide: 120,892
- Since beginning of last month:
- Site-wide: 120,892
A system-wide approach to monitor responses to synergistic BRAF and EGFR inhibition in colorectal cancer cells
cancer biology more details view paper- Downloaded 434 times
- Download rankings, all-time:
- Site-wide: 57,754
- In cancer biology: 1,627
- Year to date:
- Site-wide: 108,713
- Since beginning of last month:
- Site-wide: 108,713
Distinct genomic profiles are associated with treatment response and survival in ovarian cancer
genetic and genomic medicine more details view paper- Downloaded 433 times
- Download rankings, all-time:
- Site-wide: 57,833
- In genetic and genomic medicine: 168
- Year to date:
- Site-wide: 22,778
- Since beginning of last month:
- Site-wide: 22,778
Prioritization of genes driving congenital phenotypes of patients with de novo genomic structural variants
genomics more details view paper- Downloaded 375 times
- Download rankings, all-time:
- Site-wide: 66,626
- In genomics: 4,732
- Year to date:
- Site-wide: 90,105
- Since beginning of last month:
- Site-wide: 90,105
Mutational impact of chronic alcohol use on stem cells in cirrhotic liver
cancer biology more details view paper- Downloaded 363 times
- Download rankings, all-time:
- Site-wide: 68,623
- In cancer biology: 1,987
- Year to date:
- Site-wide: 53,273
- Since beginning of last month:
- Site-wide: 53,273
Unscrambling cancer genomes via integrated analysis of structural variation and copy number
cancer biology more details view paper- Downloaded 259 times
- Download rankings, all-time:
- Site-wide: 88,719
- In cancer biology: 2,673
- Year to date:
- Site-wide: 20,531
- Since beginning of last month:
- Site-wide: 20,531
Clinical validation of Whole Genome Sequencing for cancer diagnostics
genetic and genomic medicine more details view paper- Downloaded 251 times
- Download rankings, all-time:
- Site-wide: 90,369
- In genetic and genomic medicine: 317
- Year to date:
- Site-wide: 32,715
- Since beginning of last month:
- Site-wide: 32,715
PanLingua
News
- 27 Nov 2020: The website and API now include results pulled from medRxiv as well as bioRxiv.
- 18 Dec 2019: We're pleased to announce PanLingua, a new tool that enables you to search for machine-translated bioRxiv preprints using more than 100 different languages.
- 21 May 2019: PLOS Biology has published a community page about Rxivist.org and its design.
- 10 May 2019: The paper analyzing the Rxivist dataset has been published at eLife.
- 1 Mar 2019: We now have summary statistics about bioRxiv downloads and submissions.
- 8 Feb 2019: Data from Altmetric is now available on the Rxivist details page for every preprint. Look for the "donut" under the download metrics.
- 30 Jan 2019: preLights has featured the Rxivist preprint and written about our findings.
- 22 Jan 2019: Nature just published an article about Rxivist and our data.
- 13 Jan 2019: The Rxivist preprint is live!