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Author: Mingyao Li

Rankings

  • All-time downloads: 24,636 (rank: 1,971 out of 383,801)
  • Categories:
    • bioinformatics: 6,273 (rank: 1,251 out of 32,862)
    • cell biology: 3,332 (rank: 794 (tie) out of 28,511)
    • developmental biology: 968 (rank: 2,477 (tie) out of 14,882)
    • genetics: 1,881 (rank: 7,829 (tie) out of 35,473)
    • genomics: 12,182 (rank: 1,054 out of 40,853)

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Preprints

SAVER: Gene expression recovery for UMI-based single cell RNA sequencing

genomics more details view paper
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Deep learning enables accurate clustering and batch effect removal in single-cell RNA-seq analysis

genomics more details view paper
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    • In genomics: 353 out of 5,703
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Comprehensive single cell RNAseq analysis of the kidney reveals novel cell types and unexpected cell plasticity

cell biology more details view paper
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    • Site-wide: 45,957 out of 89,581

Gene Expression Distribution Deconvolution in Single Cell RNA Sequencing

genetics more details view paper
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    • In genetics: 301 out of 4,628
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Bulk Tissue Cell Type Deconvolution with Multi-Subject Single-Cell Expression Reference

bioinformatics more details view paper
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    • Site-wide: 4,364 out of 89,581
    • In bioinformatics: 804 out of 8,443
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Integrative single-cell and bulk RNA-seq analysis in human retina identified cell type-specific composition and gene expression changes for age-related macular degeneration

genomics more details view paper
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    • Site-wide: 5,628 out of 89,581

Accounting For Technical Noise In Single-Cell RNA Sequencing Analysis

bioinformatics more details view paper
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    • In bioinformatics: 1,163 out of 8,443
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    • Site-wide: 47,848 out of 89,581

Modeling allele-specific gene expression by single-cell RNA sequencing

genomics more details view paper
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    • In genomics: 1,322 out of 5,703
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    • Site-wide: 60,129 out of 89,581

LinkedSV for detection of mosaic structural variants from linked-read exome and genome sequencing data

bioinformatics more details view paper
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    • Site-wide: 9,425 out of 89,581
    • In bioinformatics: 1,561 out of 8,443
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    • Site-wide: 30,966 out of 89,581
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    • Site-wide: 22,352 out of 89,581

HadoopCNV: A Dynamic Programming Imputation Algorithm To Detect Copy Number Variants From Sequencing Data

bioinformatics more details view paper
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    • In bioinformatics: 1,687 out of 8,443
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    • Site-wide: 31,927 out of 89,581

Pathologic gene network rewiring implicates PPP1R3A as a central cardioprotective factor in pressure overload heart failure

genomics more details view paper
  • Downloaded 976 times
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    • In genomics: 1,661 out of 5,703
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    • Site-wide: 47,201 out of 89,581

Single cell resolution regulatory landscape of the mouse kidney highlights cellular differentiation programs and renal disease targets

developmental biology more details view paper
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    • In developmental biology: 255 out of 2,667
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    • Site-wide: 1,551 out of 89,581
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    • Site-wide: 834 out of 89,581

Detecting differential alternative splicing events in scRNA-seq with or without UMIs

bioinformatics more details view paper
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    • Site-wide: 14,655 out of 89,581
    • In bioinformatics: 2,266 out of 8,443
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    • Site-wide: 9,378 out of 89,581
  • Since beginning of last month:
    • Site-wide: 14,463 out of 89,581

Single cell transcriptomics identifies a unique adipocyte population that regulates bone marrow environment

cell biology more details view paper
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    • Site-wide: 14,673 out of 89,581
    • In cell biology: 609 out of 4,598
  • Year to date:
    • Site-wide: 8,739 out of 89,581
  • Since beginning of last month:
    • Site-wide: 21,342 out of 89,581

Iterative transfer learning with neural network for clustering and cell type classification in single-cell RNA-seq analysis

genomics more details view paper
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    • Site-wide: 31,217 out of 89,581
    • In genomics: 3,138 out of 5,703
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    • Site-wide: 4,042 out of 89,581
  • Since beginning of last month:
    • Site-wide: 13,476 out of 89,581

Profiling APOL1 Nephropathy Risk Variants in Genome-Edited Kidney Organoids with Single-Cell Transcriptomics

genomics more details view paper
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    • In genomics: 3,490 out of 5,703
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    • Site-wide: 39,126 out of 89,581

ASEP: gene-based detection of allele-specific expression in a population by RNA-seq

genomics more details view paper
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    • In genomics: 5,014 out of 5,703
  • Year to date:
    • Site-wide: 55,265 out of 89,581
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    • Site-wide: 54,650 out of 89,581

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