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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 60,207 bioRxiv papers from 267,649 authors.

Author: Mingyao Li

  • Most recently observed institution: University of Pennsylvania

Rankings

  • All-time downloads: 17,075 (rank: 1,552 out of 267,649)
  • Categories:
    • bioinformatics: 5,063 (rank: 1,010 (tie) out of 23,839)
    • cell biology: 2,454 (rank: 622 (tie) out of 17,570)
    • genetics: 1,709 (rank: 6,533 (tie) out of 27,054)
    • genomics: 7,849 (rank: 1,325 out of 31,222)

Downloads per author, site-wide

Preprints

Integrative single-cell and bulk RNA-seq analysis in human retina identified cell type-specific composition and gene expression changes for age-related macular degeneration

genomics more details view paper

No bioRxiv download data for this paper yet.

SAVER: Gene expression recovery for UMI-based single cell RNA sequencing

genomics more details view paper
  • Downloaded 4,013 times
  • Download rankings, all-time:
    • Site-wide: 602 out of 60,207
    • In genomics: 162 out of 4,168
  • Year to date:
    • Site-wide: 5,112 out of 60,207
  • Since beginning of last month:
    • Site-wide: 14,718 out of 60,207

Comprehensive single cell RNAseq analysis of the kidney reveals novel cell types and unexpected cell plasticity

cell biology more details view paper
  • Downloaded 2,288 times
  • Download rankings, all-time:
    • Site-wide: 1,697 out of 60,207
    • In cell biology: 47 out of 2,858
  • Year to date:
    • Site-wide: 17,912 out of 60,207
  • Since beginning of last month:
    • Site-wide: 16,088 out of 60,207

Deep learning enables accurate clustering and batch effect removal in single-cell RNA-seq analysis

genomics more details view paper
  • Downloaded 1,891 times
  • Download rankings, all-time:
    • Site-wide: 2,367 out of 60,207
    • In genomics: 497 out of 4,168
  • Year to date:
    • Site-wide: 377 out of 60,207
  • Since beginning of last month:
    • Site-wide: 646 out of 60,207

Gene Expression Distribution Deconvolution in Single Cell RNA Sequencing

genetics more details view paper
  • Downloaded 1,709 times
  • Download rankings, all-time:
    • Site-wide: 2,819 out of 60,207
    • In genetics: 253 out of 3,431
  • Year to date:
    • Site-wide: 14,909 out of 60,207
  • Since beginning of last month:
    • Site-wide: 34,807 out of 60,207

Bulk Tissue Cell Type Deconvolution with Multi-Subject Single-Cell Expression Reference

bioinformatics more details view paper
  • Downloaded 1,665 times
  • Download rankings, all-time:
    • Site-wide: 2,945 out of 60,207
    • In bioinformatics: 597 out of 6,077
  • Year to date:
    • Site-wide: 5,033 out of 60,207
  • Since beginning of last month:
    • Site-wide: 26,491 out of 60,207

Accounting For Technical Noise In Single-Cell RNA Sequencing Analysis

bioinformatics more details view paper
  • Downloaded 1,266 times
  • Download rankings, all-time:
    • Site-wide: 4,615 out of 60,207
    • In bioinformatics: 915 out of 6,077
  • Year to date:
    • Site-wide: 25,902 out of 60,207
  • Since beginning of last month:
    • Site-wide: 28,980 out of 60,207

Modeling allele-specific gene expression by single-cell RNA sequencing

genomics more details view paper
  • Downloaded 1,083 times
  • Download rankings, all-time:
    • Site-wide: 6,010 out of 60,207
    • In genomics: 1,001 out of 4,168
  • Year to date:
    • Site-wide: 36,092 out of 60,207
  • Since beginning of last month:
    • Site-wide: 30,875 out of 60,207

HadoopCNV: A Dynamic Programming Imputation Algorithm To Detect Copy Number Variants From Sequencing Data

bioinformatics more details view paper
  • Downloaded 921 times
  • Download rankings, all-time:
    • Site-wide: 7,760 out of 60,207
    • In bioinformatics: 1,386 out of 6,077
  • Year to date:
    • Site-wide: 29,257 out of 60,207
  • Since beginning of last month:
    • Site-wide: 32,889 out of 60,207

LinkedSV: Detection of mosaic structural variants from linked-read exome and genome sequencing data

bioinformatics more details view paper
  • Downloaded 865 times
  • Download rankings, all-time:
    • Site-wide: 8,549 out of 60,207
    • In bioinformatics: 1,505 out of 6,077
  • Year to date:
    • Site-wide: 3,333 out of 60,207
  • Since beginning of last month:
    • Site-wide: 4,067 out of 60,207

Pathologic gene network rewiring implicates PPP1R3A as a central cardioprotective factor in pressure overload heart failure

genomics more details view paper
  • Downloaded 862 times
  • Download rankings, all-time:
    • Site-wide: 8,605 out of 60,207
    • In genomics: 1,314 out of 4,168
  • Year to date:
    • Site-wide: 32,368 out of 60,207
  • Since beginning of last month:
    • Site-wide: 24,777 out of 60,207

Detecting differential alternative splicing events in scRNA-seq with or without UMIs

bioinformatics more details view paper
  • Downloaded 346 times
  • Download rankings, all-time:
    • Site-wide: 27,595 out of 60,207
    • In bioinformatics: 3,712 out of 6,077
  • Year to date:
    • Site-wide: 7,864 out of 60,207
  • Since beginning of last month:
    • Site-wide: 456 out of 60,207

Single cell transcriptomics identifies a unique adipocyte population that regulates bone marrow environment

cell biology more details view paper
  • Downloaded 166 times
  • Download rankings, all-time:
    • Site-wide: 46,449 out of 60,207
    • In cell biology: 2,252 out of 2,858
  • Year to date:
    • Site-wide: 22,313 out of 60,207
  • Since beginning of last month:
    • Site-wide: 1,661 out of 60,207

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