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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 73,470 bioRxiv papers from 319,776 authors.

Author: Mingyao Li

Rankings

  • All-time downloads: 21,144 (rank: 1,473 out of 319,776)
  • Categories:
    • bioinformatics: 5,744 (rank: 1,067 out of 27,718)
    • cell biology: 3,002 (rank: 740 (tie) out of 22,463)
    • genetics: 1,793 (rank: 7,242 (tie) out of 31,306)
    • genomics: 10,605 (rank: 1,094 out of 35,649)

Downloads per author, site-wide

Preprints

SAVER: Gene expression recovery for UMI-based single cell RNA sequencing

genomics more details view paper
  • Downloaded 4,160 times
  • Download rankings, all-time:
    • Site-wide: 714 out of 73,470
    • In genomics: 173 out of 4,874
  • Year to date:
    • Site-wide: 28,138 out of 73,470
  • Since beginning of last month:
    • Site-wide: 28,138 out of 73,470

Deep learning enables accurate clustering and batch effect removal in single-cell RNA-seq analysis

genomics more details view paper
  • Downloaded 2,607 times
  • Download rankings, all-time:
    • Site-wide: 1,689 out of 73,470
    • In genomics: 369 out of 4,874
  • Year to date:
    • Site-wide: 3,219 out of 73,470
  • Since beginning of last month:
    • Site-wide: 3,219 out of 73,470

Comprehensive single cell RNAseq analysis of the kidney reveals novel cell types and unexpected cell plasticity

cell biology more details view paper
  • Downloaded 2,359 times
  • Download rankings, all-time:
    • Site-wide: 2,038 out of 73,470
    • In cell biology: 57 out of 3,632
  • Year to date:
    • Site-wide: 23,351 out of 73,470
  • Since beginning of last month:
    • Site-wide: 23,351 out of 73,470

Gene Expression Distribution Deconvolution in Single Cell RNA Sequencing

genetics more details view paper
  • Downloaded 1,793 times
  • Download rankings, all-time:
    • Site-wide: 3,268 out of 73,470
    • In genetics: 274 out of 4,032
  • Year to date:
    • Site-wide: 33,809 out of 73,470
  • Since beginning of last month:
    • Site-wide: 33,809 out of 73,470

Bulk Tissue Cell Type Deconvolution with Multi-Subject Single-Cell Expression Reference

bioinformatics more details view paper
  • Downloaded 1,736 times
  • Download rankings, all-time:
    • Site-wide: 3,459 out of 73,470
    • In bioinformatics: 678 out of 7,157
  • Year to date:
    • Site-wide: 43,831 out of 73,470
  • Since beginning of last month:
    • Site-wide: 43,831 out of 73,470

Accounting For Technical Noise In Single-Cell RNA Sequencing Analysis

bioinformatics more details view paper
  • Downloaded 1,329 times
  • Download rankings, all-time:
    • Site-wide: 5,424 out of 73,470
    • In bioinformatics: 1,024 out of 7,157
  • Year to date:
    • Site-wide: 32,005 out of 73,470
  • Since beginning of last month:
    • Site-wide: 32,005 out of 73,470

Modeling allele-specific gene expression by single-cell RNA sequencing

genomics more details view paper
  • Downloaded 1,140 times
  • Download rankings, all-time:
    • Site-wide: 7,022 out of 73,470
    • In genomics: 1,126 out of 4,874
  • Year to date:
    • Site-wide: 61,644 out of 73,470
  • Since beginning of last month:
    • Site-wide: 61,644 out of 73,470

Integrative single-cell and bulk RNA-seq analysis in human retina identified cell type-specific composition and gene expression changes for age-related macular degeneration

genomics more details view paper
  • Downloaded 1,049 times
  • Download rankings, all-time:
    • Site-wide: 8,055 out of 73,470
    • In genomics: 1,266 out of 4,874
  • Year to date:
    • Site-wide: 3,214 out of 73,470
  • Since beginning of last month:
    • Site-wide: 3,214 out of 73,470

LinkedSV for detection of mosaic structural variants from linked-read exome and genome sequencing data

bioinformatics more details view paper
  • Downloaded 1,040 times
  • Download rankings, all-time:
    • Site-wide: 8,175 out of 73,470
    • In bioinformatics: 1,427 out of 7,157
  • Year to date:
    • Site-wide: 20,397 out of 73,470
  • Since beginning of last month:
    • Site-wide: 20,397 out of 73,470

HadoopCNV: A Dynamic Programming Imputation Algorithm To Detect Copy Number Variants From Sequencing Data

bioinformatics more details view paper
  • Downloaded 981 times
  • Download rankings, all-time:
    • Site-wide: 8,983 out of 73,470
    • In bioinformatics: 1,542 out of 7,157
  • Year to date:
    • Site-wide: 58,577 out of 73,470
  • Since beginning of last month:
    • Site-wide: 58,577 out of 73,470

Pathologic gene network rewiring implicates PPP1R3A as a central cardioprotective factor in pressure overload heart failure

genomics more details view paper
  • Downloaded 911 times
  • Download rankings, all-time:
    • Site-wide: 10,132 out of 73,470
    • In genomics: 1,501 out of 4,874
  • Year to date:
    • Site-wide: 34,820 out of 73,470
  • Since beginning of last month:
    • Site-wide: 34,820 out of 73,470

Detecting differential alternative splicing events in scRNA-seq with or without UMIs

bioinformatics more details view paper
  • Downloaded 658 times
  • Download rankings, all-time:
    • Site-wide: 16,443 out of 73,470
    • In bioinformatics: 2,526 out of 7,157
  • Year to date:
    • Site-wide: 5,562 out of 73,470
  • Since beginning of last month:
    • Site-wide: 5,562 out of 73,470

Single cell transcriptomics identifies a unique adipocyte population that regulates bone marrow environment

cell biology more details view paper
  • Downloaded 643 times
  • Download rankings, all-time:
    • Site-wide: 17,029 out of 73,470
    • In cell biology: 718 out of 3,632
  • Year to date:
    • Site-wide: 5,565 out of 73,470
  • Since beginning of last month:
    • Site-wide: 5,565 out of 73,470

Profiling APOL1 Nephropathy Risk Variants in Genome-Edited Kidney Organoids with Single-Cell Transcriptomics

genomics more details view paper
  • Downloaded 361 times
  • Download rankings, all-time:
    • Site-wide: 34,597 out of 73,470
    • In genomics: 3,305 out of 4,874
  • Year to date:
    • Site-wide: 17,705 out of 73,470
  • Since beginning of last month:
    • Site-wide: 17,705 out of 73,470

Iterative transfer learning with neural network for clustering and cell type classification in single-cell RNA-seq analysis

genomics more details view paper
  • Downloaded 235 times
  • Download rankings, all-time:
    • Site-wide: 49,534 out of 73,470
    • In genomics: 4,029 out of 4,874
  • Year to date:
    • Site-wide: 1,241 out of 73,470
  • Since beginning of last month:
    • Site-wide: 1,241 out of 73,470

ASEP: gene-based detection of allele-specific expression in a population by RNA-seq

genomics more details view paper
  • Downloaded 142 times
  • Download rankings, all-time:
    • Site-wide: 63,480 out of 73,470
    • In genomics: 4,574 out of 4,874
  • Year to date:
    • Site-wide: 45,959 out of 73,470
  • Since beginning of last month:
    • Site-wide: 45,959 out of 73,470

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