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Author: Alaina Shumate

  • ORCiD: http://orcid.org/0000-0002-4450-1857
  • Most recently observed institution: Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD 21218; Center for Computational Biology, Whiting School of Engineering, Johns Hopkins University, Baltimore, MD 21211

Rankings

  • All-time downloads: 46,452 (rank: 3,542 )
  • Categories:
    • bioinformatics: 2,567 (rank: 5,896 (tie) )
    • genomics: 43,885 (rank: 211 )

Downloads per author, site-wide

Preprints

A complete reference genome improves analysis of human genetic variation

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The complete sequence of a human genome

genomics more details view paper
  • Downloaded 33,007 times
  • Download rankings, all-time:
    • Site-wide: 217
    • In genomics: 10
  • Year to date:
    • Site-wide: 40
  • Since beginning of last month:
    • Site-wide: 8

Thousands of large-scale RNA sequencing experiments yield a comprehensive new human gene list and reveal extensive transcriptional noise

genomics more details view paper
  • Downloaded 7,632 times
  • Download rankings, all-time:
    • Site-wide: 1,302
    • In genomics: 109
  • Year to date:
    • Site-wide: 8,263
  • Since beginning of last month:
    • Site-wide: 17,898

Liftoff: an accurate gene annotation mapping tool

bioinformatics more details view paper
  • Downloaded 2,567 times
  • Download rankings, all-time:
    • Site-wide: 5,921
    • In bioinformatics: 629
  • Year to date:
    • Site-wide: 4,772
  • Since beginning of last month:
    • Site-wide: 8,124

Chromosome-scale assembly of the bread wheat genome, Triticum aestivum, reveals over 5700 new genes

genomics more details view paper
  • Downloaded 952 times
  • Download rankings, all-time:
    • Site-wide: 25,698
    • In genomics: 2,387
  • Year to date:
    • Site-wide: 42,507
  • Since beginning of last month:
    • Site-wide: 33,449

Towards a Comprehensive Variation Benchmark for Challenging Medically-Relevant Autosomal Genes

genomics more details view paper
  • Downloaded 906 times
  • Download rankings, all-time:
    • Site-wide: 27,504
    • In genomics: 2,512
  • Year to date:
    • Site-wide: 3,235
  • Since beginning of last month:
    • Site-wide: 447

Assembly and Annotation of an Ashkenazi Human Reference Genome

genomics more details view paper
  • Downloaded 589 times
  • Download rankings, all-time:
    • Site-wide: 49,117
    • In genomics: 3,805
  • Year to date:
    • Site-wide: 65,404
  • Since beginning of last month:
    • Site-wide: 65,931

Chasing perfection: validation and polishing strategies for telomere-to-telomere genome assemblies

genomics more details view paper
  • Downloaded 409 times
  • Download rankings, all-time:
    • Site-wide: 73,671
    • In genomics: 5,009
  • Year to date:
    • Site-wide: 10,325
  • Since beginning of last month:
    • Site-wide: 1,252

A reference-quality, fully annotated genome from a Puerto Rican individual

genomics more details view paper
  • Downloaded 390 times
  • Download rankings, all-time:
    • Site-wide: 77,239
    • In genomics: 5,161
  • Year to date:
    • Site-wide: 11,019
  • Since beginning of last month:
    • Site-wide: 1,327

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