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Author: Todd J Treangen

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  • All-time downloads: 15,093 (rank: 3,994 (tie) out of 365,826)
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    • bioinformatics: 14,676 (rank: 227 out of 31,508)
    • genetics: 417 (rank: 22,364 (tie) out of 34,196)

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Preprints

PlasmidHawk: Alignment-based Lab-of-Origin Prediction of Synthetic Plasmids

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KOMB: Taxonomy-oblivious Characterization of Metagenome Dynamics via K-core Decomposition

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Mash: fast genome and metagenome distance estimation using MinHash

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High-throughput ANI Analysis of 90K Prokaryotic Genomes Reveals Clear Species Boundaries

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Rapid Core-Genome Alignment and Visualization for Thousands of Intraspecific Microbial Genomes

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Automated ensemble assembly and validation of microbial genomes

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The evolution of the natural killer complex; a comparison between mammals using new high-quality genome assemblies and targeted annotation

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Diversified RACE Sampling on Data Streams Applied to Metagenomic Sequence Analysis

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