Author: Marcin Tabaka

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Preprints

Reconstruction of developmental landscapes by optimal-transport analysis of single-cell gene expression sheds light on cellular reprogramming.

• Downloaded 11,978 times
• Download rankings, all-time:
  • Site-wide: 750
  • In bioinformatics: 29
• Year to date:
  • Site-wide: 13,185
• Since beginning of last month:
  • Site-wide: 39,383

Genetic determinants of co-accessible chromatin regions in T cell activation across humans

• Downloaded 5,090 times
• Download rankings, all-time:
  • Site-wide: 2,296
  • In genomics: 213
• Year to date:
  • Site-wide: 59,019
• Since beginning of last month:
  • Site-wide: 40,009

Decoding the development of the blood and immune systems during human fetal liver haematopoiesis

• Downloaded 3,674 times
• Download rankings, all-time:
  • Site-wide: 3,634
  • In developmental biology: 32
• Year to date:
  • Site-wide: 25,629
• Since beginning of last month:
  • Site-wide: 85,949

Cumulus: a cloud-based data analysis framework for large-scale single-cell and single-nucleus RNA-seq

• Downloaded 1,917 times
• Download rankings, all-time:
  • Site-wide: 9,310
  • In bioinformatics: 1,081
• Year to date:
  • Site-wide: 21,202
• Since beginning of last month:
  • Site-wide: 41,492

scSVA: an interactive tool for big data visualization and exploration in single-cell omics

• Downloaded 1,771 times
• Download rankings, all-time:
  • Site-wide: 10,475
  • In bioinformatics: 1,216
• Year to date:
  • Site-wide: 55,375
• Since beginning of last month:
  • Site-wide: 64,469

Cycling cancer persister cells arise from lineages with distinct transcriptional and metabolic programs

• Downloaded 1,741 times
• Download rankings, all-time:
  • Site-wide: 10,732
  • In cancer biology: 200
• Year to date:
  • Site-wide: 3,665
• Since beginning of last month:
  • Site-wide: 3,748

Genetic predisposition to myeloproliferative neoplasms implicates hematopoietic stem cell biology

• Downloaded 1,310 times
• Download rankings, all-time:
  • Site-wide: 16,412
  • In genetics: 760
• Year to date:
  • Site-wide: 34,515
• Since beginning of last month:
  • Site-wide: 24,091

Single cell profiling of immature human postnatal thymocytes resolves the complexity of intra-thymic lineage differentiation and thymus seeding precursors.

• Downloaded 1,274 times
• Download rankings, all-time:
  • Site-wide: 17,106
  • In immunology: 553
• Year to date:
  • Site-wide: 26,938
• Since beginning of last month:
  • Site-wide: 40,586

Intrinsic and extrinsic regulation of human fetal bone marrow haematopoiesis and perturbations in Down syndrome

• Downloaded 315 times
• Download rankings, all-time:
  • Site-wide: 94,230
  • In developmental biology: 2,518
• Year to date:
  • Site-wide: 16,575
• Since beginning of last month:
  • Site-wide: 19,347