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Author: Gad A. Getz

Rankings

  • All-time downloads: 131,605 (rank: 668 )
  • Categories:
    • bioinformatics: 16,444 (rank: 367 )
    • cancer biology: 56,327 (rank: 15 )
    • genetics: 11,045 (rank: 1,418 )
    • genomics: 47,789 (rank: 163 )

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Preprints

Analysis of protein-coding genetic variation in 60,706 humans

genomics more details view paper
  • Downloaded 22,050 times
  • Download rankings, all-time:
    • Site-wide: 310
    • In genomics: 11
  • Year to date:
    • Site-wide: 22,530
  • Since beginning of last month:
    • Site-wide: 15,857

The Repertoire of Mutational Signatures in Human Cancer

cancer biology more details view paper
  • Downloaded 19,137 times
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    • Site-wide: 362
    • In cancer biology: 2
  • Year to date:
    • Site-wide: 2,205
  • Since beginning of last month:
    • Site-wide: 2,764

The evolutionary history of 2,658 cancers

cancer biology more details view paper
  • Downloaded 9,500 times
  • Download rankings, all-time:
    • Site-wide: 879
    • In cancer biology: 8
  • Year to date:
    • Site-wide: 30,966
  • Since beginning of last month:
    • Site-wide: 25,508

The GTEx Consortium atlas of genetic regulatory effects across human tissues

genetics more details view paper
  • Downloaded 8,314 times
  • Download rankings, all-time:
    • Site-wide: 1,050
    • In genetics: 29
  • Year to date:
    • Site-wide: 4,463
  • Since beginning of last month:
    • Site-wide: 7,203

The whole-genome panorama of cancer drivers

cancer biology more details view paper
  • Downloaded 6,673 times
  • Download rankings, all-time:
    • Site-wide: 1,374
    • In cancer biology: 13
  • Year to date:
    • Site-wide: 12,454
  • Since beginning of last month:
    • Site-wide: 14,621

Rapid and efficient analysis of 20,000 RNA-seq samples with Toil

bioinformatics more details view paper
  • Downloaded 6,541 times
  • Download rankings, all-time:
    • Site-wide: 1,411
    • In bioinformatics: 93
  • Year to date:
    • Site-wide: 18,968
  • Since beginning of last month:
    • Site-wide: 13,450

Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes

cancer biology more details view paper
  • Downloaded 6,024 times
  • Download rankings, all-time:
    • Site-wide: 1,580
    • In cancer biology: 19
  • Year to date:
    • Site-wide: 2,799
  • Since beginning of last month:
    • Site-wide: 2,108

Discovery and characterization of coding and non-coding driver mutations in more than 2,500 whole cancer genomes

genomics more details view paper
  • Downloaded 5,496 times
  • Download rankings, all-time:
    • Site-wide: 1,806
    • In genomics: 169
  • Year to date:
    • Site-wide: 19,416
  • Since beginning of last month:
    • Site-wide: 20,727

Calling Somatic SNVs and Indels with Mutect2

bioinformatics more details view paper
  • Downloaded 5,355 times
  • Download rankings, all-time:
    • Site-wide: 1,870
    • In bioinformatics: 150
  • Year to date:
    • Site-wide: 1,112
  • Since beginning of last month:
    • Site-wide: 2,645

Thousands of novel unannotated proteins expand the MHC I immunopeptidome in cancer

cancer biology more details view paper
  • Downloaded 3,869 times
  • Download rankings, all-time:
    • Site-wide: 2,962
    • In cancer biology: 43
  • Year to date:
    • Site-wide: 2,165
  • Since beginning of last month:
    • Site-wide: 2,488

Tumor mutational landscape is a record of the pre-malignant state

genomics more details view paper
  • Downloaded 3,562 times
  • Download rankings, all-time:
    • Site-wide: 3,350
    • In genomics: 373
  • Year to date:
    • Site-wide: 18,505
  • Since beginning of last month:
    • Site-wide: 12,070

A comprehensive analysis of RNA sequences reveals macroscopic somatic clonal expansion across normal tissues

genomics more details view paper
  • Downloaded 3,343 times
  • Download rankings, all-time:
    • Site-wide: 3,655
    • In genomics: 406
  • Year to date:
    • Site-wide: 35,203
  • Since beginning of last month:
    • Site-wide: 30,962

Scaling computational genomics to millions of individuals with GPUs

genomics more details view paper
  • Downloaded 3,309 times
  • Download rankings, all-time:
    • Site-wide: 3,709
    • In genomics: 412
  • Year to date:
    • Site-wide: 62,083
  • Since beginning of last month:
    • Site-wide: 82,382

A deep learning system can accurately classify primary and metastatic cancers based on patterns of passenger mutations

cancer biology more details view paper
  • Downloaded 3,211 times
  • Download rankings, all-time:
    • Site-wide: 3,870
    • In cancer biology: 55
  • Year to date:
    • Site-wide: 47,724
  • Since beginning of last month:
    • Site-wide: 24,404

Comprehensive analysis of tumour initiation, spatial and temporal progression under multiple lines of treatment

bioinformatics more details view paper
  • Downloaded 2,882 times
  • Download rankings, all-time:
    • Site-wide: 4,499
    • In bioinformatics: 464
  • Year to date:
    • Site-wide: 6,095
  • Since beginning of last month:
    • Site-wide: 11,616

WRN Helicase is a Synthetic Lethal Target in Microsatellite Unstable Cancers

cancer biology more details view paper
  • Downloaded 2,852 times
  • Download rankings, all-time:
    • Site-wide: 4,555
    • In cancer biology: 63
  • Year to date:
    • Site-wide: 30,053
  • Since beginning of last month:
    • Site-wide: 32,935

Cell type specific genetic regulation of gene expression across human tissues

genomics more details view paper
  • Downloaded 2,555 times
  • Download rankings, all-time:
    • Site-wide: 5,346
    • In genomics: 590
  • Year to date:
    • Site-wide: 17,136
  • Since beginning of last month:
    • Site-wide: 17,091

Large-Scale Uniform Analysis of Cancer Whole Genomes in Multiple Computing Environments

genomics more details view paper
  • Downloaded 2,361 times
  • Download rankings, all-time:
    • Site-wide: 6,062
    • In genomics: 678
  • Year to date:
    • Site-wide: 32,475
  • Since beginning of last month:
    • Site-wide: 28,663

A comparative analysis of network mutation burdens across 21 tumor types augments discovery from cancer genomes

cancer biology more details view paper
  • Downloaded 2,126 times
  • Download rankings, all-time:
    • Site-wide: 7,045
    • In cancer biology: 108
  • Year to date:
    • Site-wide: 117,739
  • Since beginning of last month:
    • Site-wide: 126,670

Passenger mutations in 2500 cancer genomes: Overall molecular functional impact and consequences

genomics more details view paper
  • Downloaded 2,119 times
  • Download rankings, all-time:
    • Site-wide: 7,068
    • In genomics: 771
  • Year to date:
    • Site-wide: 38,304
  • Since beginning of last month:
    • Site-wide: 42,125

Clustering of Type 2 Diabetes Genetic Loci by Multi-Trait Associations Identifies Disease Mechanisms and Subtypes

genetics more details view paper
  • Downloaded 2,036 times
  • Download rankings, all-time:
    • Site-wide: 7,481
    • In genetics: 347
  • Year to date:
    • Site-wide: 45,798
  • Since beginning of last month:
    • Site-wide: 33,473

Passenger Hotspot Mutations in Cancer

genomics more details view paper
  • Downloaded 1,912 times
  • Download rankings, all-time:
    • Site-wide: 8,216
    • In genomics: 884
  • Year to date:
    • Site-wide: 54,163
  • Since beginning of last month:
    • Site-wide: 42,040

Pathway and network analysis of more than 2,500 whole cancer genomes

cancer biology more details view paper
  • Downloaded 1,571 times
  • Download rankings, all-time:
    • Site-wide: 11,025
    • In cancer biology: 217
  • Year to date:
    • Site-wide: 105,191
  • Since beginning of last month:
    • Site-wide: 116,257

Framework For Quality Assessment Of Whole Genome, Cancer Sequences

genomics more details view paper
  • Downloaded 1,082 times
  • Download rankings, all-time:
    • Site-wide: 19,242
    • In genomics: 1,924
  • Year to date:
    • Site-wide: 124,676
  • Since beginning of last month:
    • Site-wide: 97,745

Expanding discovery from cancer genomes by integrating protein network analyses with in vivo tumorigenesis assays

cancer biology more details view paper
  • Downloaded 934 times
  • Download rankings, all-time:
    • Site-wide: 23,866
    • In cancer biology: 594
  • Year to date:
    • Site-wide: 134,465
  • Since beginning of last month:
    • Site-wide: 133,028

The Tangent copy-number inference pipeline for cancer genome analyses

bioinformatics more details view paper
  • Downloaded 921 times
  • Download rankings, all-time:
    • Site-wide: 24,376
    • In bioinformatics: 2,849
  • Year to date:
    • Site-wide: 37,023
  • Since beginning of last month:
    • Site-wide: 19,004

Detecting cancer vulnerabilities through gene networks under purifying selection in 4,700 cancer genomes

bioinformatics more details view paper
  • Downloaded 745 times
  • Download rankings, all-time:
    • Site-wide: 32,739
    • In bioinformatics: 3,664
  • Year to date:
    • Site-wide: 87,261
  • Since beginning of last month:
    • Site-wide: 109,690

Case-control analysis identifies shared properties of rare germline variation in cancer predisposing genes

genetics more details view paper
  • Downloaded 695 times
  • Download rankings, all-time:
    • Site-wide: 36,029
    • In genetics: 1,708
  • Year to date:
    • Site-wide: 125,063
  • Since beginning of last month:
    • Site-wide: 119,873

Distinct evolutionary paths in chronic lymphocytic leukemia during resistance to graft-versus-leukemia

cancer biology more details view paper
  • Downloaded 430 times
  • Download rankings, all-time:
    • Site-wide: 63,725
    • In cancer biology: 1,818
  • Year to date:
    • Site-wide: 59,903
  • Since beginning of last month:
    • Site-wide: 59,087

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