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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 70,903 bioRxiv papers from 309,378 authors.

Author: Gad Getz

Rankings

  • All-time downloads: 108,891 (rank: 57 out of 309,498)
  • Categories:
    • bioinformatics: 10,134 (rank: 339 out of 26,887)
    • cancer biology: 41,563 (rank: 15 out of 20,248)
    • genetics: 6,418 (rank: 2,517 out of 30,613)
    • genomics: 50,776 (rank: 110 out of 34,893)

Downloads per author, site-wide

Preprints

Analysis of protein-coding genetic variation in 60,706 humans

genomics more details view paper
  • Downloaded 21,578 times
  • Download rankings, all-time:
    • Site-wide: 31 out of 70,927
    • In genomics: 7 out of 4,728
  • Year to date:
    • Site-wide: 14,282 out of 70,927
  • Since beginning of last month:
    • Site-wide: 18,453 out of 70,927

The Repertoire of Mutational Signatures in Human Cancer

cancer biology more details view paper
  • Downloaded 14,706 times
  • Download rankings, all-time:
    • Site-wide: 62 out of 70,927
    • In cancer biology: 2 out of 2,408
  • Year to date:
    • Site-wide: 196 out of 70,927
  • Since beginning of last month:
    • Site-wide: 70 out of 70,927

The evolutionary history of 2,658 cancers

cancer biology more details view paper
  • Downloaded 8,312 times
  • Download rankings, all-time:
    • Site-wide: 187 out of 70,927
    • In cancer biology: 6 out of 2,408
  • Year to date:
    • Site-wide: 1,376 out of 70,927
  • Since beginning of last month:
    • Site-wide: 588 out of 70,927

Rapid and efficient analysis of 20,000 RNA-seq samples with Toil

bioinformatics more details view paper
  • Downloaded 5,939 times
  • Download rankings, all-time:
    • Site-wide: 344 out of 70,927
    • In bioinformatics: 65 out of 6,940
  • Year to date:
    • Site-wide: 7,670 out of 70,927
  • Since beginning of last month:
    • Site-wide: 5,108 out of 70,927

The whole-genome panorama of cancer drivers

cancer biology more details view paper
  • Downloaded 5,455 times
  • Download rankings, all-time:
    • Site-wide: 399 out of 70,927
    • In cancer biology: 12 out of 2,408
  • Year to date:
    • Site-wide: 6,931 out of 70,927
  • Since beginning of last month:
    • Site-wide: 4,329 out of 70,927

Discovery and characterization of coding and non-coding driver mutations in more than 2,500 whole cancer genomes

genomics more details view paper
  • Downloaded 4,678 times
  • Download rankings, all-time:
    • Site-wide: 527 out of 70,927
    • In genomics: 134 out of 4,728
  • Year to date:
    • Site-wide: 3,166 out of 70,927
  • Since beginning of last month:
    • Site-wide: 2,369 out of 70,927

Germline determinants of the somatic mutation landscape in 2,642 cancer genomes

genomics more details view paper
  • Downloaded 4,360 times
  • Download rankings, all-time:
    • Site-wide: 615 out of 70,927
    • In genomics: 156 out of 4,728
  • Year to date:
    • Site-wide: 7,690 out of 70,927
  • Since beginning of last month:
    • Site-wide: 8,384 out of 70,927

Local genetic effects on gene expression across 44 human tissues

genomics more details view paper
  • Downloaded 4,217 times
  • Download rankings, all-time:
    • Site-wide: 654 out of 70,927
    • In genomics: 166 out of 4,728
  • Year to date:
    • Site-wide: 20,186 out of 70,927
  • Since beginning of last month:
    • Site-wide: 18,009 out of 70,927

The GTEx Consortium atlas of genetic regulatory effects across human tissues

genetics more details view paper
  • Downloaded 4,130 times
  • Download rankings, all-time:
    • Site-wide: 682 out of 70,927
    • In genetics: 64 out of 3,928
  • Year to date:
    • Site-wide: 217 out of 70,927
  • Since beginning of last month:
    • Site-wide: 256 out of 70,927

Portraits of genetic intra-tumour heterogeneity and subclonal selection across cancer types

cancer biology more details view paper
  • Downloaded 4,051 times
  • Download rankings, all-time:
    • Site-wide: 714 out of 70,927
    • In cancer biology: 21 out of 2,408
  • Year to date:
    • Site-wide: 2,713 out of 70,927
  • Since beginning of last month:
    • Site-wide: 6,162 out of 70,927

Scaling computational genomics to millions of individuals with GPUs

genomics more details view paper
  • Downloaded 3,053 times
  • Download rankings, all-time:
    • Site-wide: 1,219 out of 70,927
    • In genomics: 280 out of 4,728
  • Year to date:
    • Site-wide: 8,290 out of 70,927
  • Since beginning of last month:
    • Site-wide: 6,130 out of 70,927

Tumor mutational landscape is a record of the pre-malignant state

genomics more details view paper
  • Downloaded 2,860 times
  • Download rankings, all-time:
    • Site-wide: 1,375 out of 70,927
    • In genomics: 309 out of 4,728
  • Year to date:
    • Site-wide: 16,006 out of 70,927
  • Since beginning of last month:
    • Site-wide: 7,017 out of 70,927

A comprehensive analysis of RNA sequences reveals macroscopic somatic clonal expansion across normal tissues

genomics more details view paper
  • Downloaded 2,820 times
  • Download rankings, all-time:
    • Site-wide: 1,401 out of 70,927
    • In genomics: 316 out of 4,728
  • Year to date:
    • Site-wide: 7,501 out of 70,927
  • Since beginning of last month:
    • Site-wide: 10,188 out of 70,927

A deep learning system can accurately classify primary and metastatic cancers based on patterns of passenger mutations

cancer biology more details view paper
  • Downloaded 2,795 times
  • Download rankings, all-time:
    • Site-wide: 1,427 out of 70,927
    • In cancer biology: 40 out of 2,408
  • Year to date:
    • Site-wide: 3,656 out of 70,927
  • Since beginning of last month:
    • Site-wide: 5,669 out of 70,927

WRN Helicase is a Synthetic Lethal Target in Microsatellite Unstable Cancers

cancer biology more details view paper
  • Downloaded 2,076 times
  • Download rankings, all-time:
    • Site-wide: 2,424 out of 70,927
    • In cancer biology: 59 out of 2,408
  • Year to date:
    • Site-wide: 3,429 out of 70,927
  • Since beginning of last month:
    • Site-wide: 3,189 out of 70,927

A comparative analysis of network mutation burdens across 21 tumor types augments discovery from cancer genomes

cancer biology more details view paper
  • Downloaded 2,023 times
  • Download rankings, all-time:
    • Site-wide: 2,536 out of 70,927
    • In cancer biology: 62 out of 2,408
  • Year to date:
    • Site-wide: 67,273 out of 70,927
  • Since beginning of last month:
    • Site-wide: 62,309 out of 70,927

Large-Scale Uniform Analysis of Cancer Whole Genomes in Multiple Computing Environments

genomics more details view paper
  • Downloaded 1,987 times
  • Download rankings, all-time:
    • Site-wide: 2,614 out of 70,927
    • In genomics: 533 out of 4,728
  • Year to date:
    • Site-wide: 17,870 out of 70,927
  • Since beginning of last month:
    • Site-wide: 29,199 out of 70,927

Passenger mutations in 2500 cancer genomes: Overall molecular functional impact and consequences

genomics more details view paper
  • Downloaded 1,729 times
  • Download rankings, all-time:
    • Site-wide: 3,320 out of 70,927
    • In genomics: 638 out of 4,728
  • Year to date:
    • Site-wide: 5,868 out of 70,927
  • Since beginning of last month:
    • Site-wide: 5,987 out of 70,927

Clustering of Type 2 Diabetes Genetic Loci by Multi-Trait Associations Identifies Disease Mechanisms and Subtypes

genetics more details view paper
  • Downloaded 1,701 times
  • Download rankings, all-time:
    • Site-wide: 3,402 out of 70,927
    • In genetics: 287 out of 3,928
  • Year to date:
    • Site-wide: 54,760 out of 70,927
  • Since beginning of last month:
    • Site-wide: 22,130 out of 70,927

Comprehensive analysis of tumour initiation, spatial and temporal progression under multiple lines of treatment

bioinformatics more details view paper
  • Downloaded 1,665 times
  • Download rankings, all-time:
    • Site-wide: 3,535 out of 70,927
    • In bioinformatics: 710 out of 6,940
  • Year to date:
    • Site-wide: 16,053 out of 70,927
  • Since beginning of last month:
    • Site-wide: 3,254 out of 70,927

Passenger Hotspot Mutations in Cancer

genomics more details view paper
  • Downloaded 1,560 times
  • Download rankings, all-time:
    • Site-wide: 3,966 out of 70,927
    • In genomics: 719 out of 4,728
  • Year to date:
    • Site-wide: 4,714 out of 70,927
  • Since beginning of last month:
    • Site-wide: 6,383 out of 70,927

Pathway and network analysis of more than 2,500 whole cancer genomes

cancer biology more details view paper
  • Downloaded 1,299 times
  • Download rankings, all-time:
    • Site-wide: 5,380 out of 70,927
    • In cancer biology: 138 out of 2,408
  • Year to date:
    • Site-wide: 17,892 out of 70,927
  • Since beginning of last month:
    • Site-wide: 15,150 out of 70,927

FireCloud, a scalable cloud-based platform for collaborative genome analysis: Strategies for reducing and controlling costs

bioinformatics more details view paper
  • Downloaded 1,037 times
  • Download rankings, all-time:
    • Site-wide: 7,824 out of 70,927
    • In bioinformatics: 1,384 out of 6,940
  • Year to date:
    • Site-wide: 18,093 out of 70,927
  • Since beginning of last month:
    • Site-wide: 16,118 out of 70,927

Cell type specific genetic regulation of gene expression across human tissues

genomics more details view paper
  • Downloaded 1,024 times
  • Download rankings, all-time:
    • Site-wide: 7,985 out of 70,927
    • In genomics: 1,259 out of 4,728
  • Year to date:
    • Site-wide: 1,938 out of 70,927
  • Since beginning of last month:
    • Site-wide: 3,281 out of 70,927

Framework For Quality Assessment Of Whole Genome, Cancer Sequences

genomics more details view paper
  • Downloaded 910 times
  • Download rankings, all-time:
    • Site-wide: 9,687 out of 70,927
    • In genomics: 1,447 out of 4,728
  • Year to date:
    • Site-wide: 19,130 out of 70,927
  • Since beginning of last month:
    • Site-wide: 63,151 out of 70,927

Expanding discovery from cancer genomes by integrating protein network analyses with in vivo tumorigenesis assays

cancer biology more details view paper
  • Downloaded 846 times
  • Download rankings, all-time:
    • Site-wide: 10,892 out of 70,927
    • In cancer biology: 323 out of 2,408
  • Year to date:
    • Site-wide: 47,298 out of 70,927
  • Since beginning of last month:
    • Site-wide: 35,807 out of 70,927

Detecting cancer vulnerabilities through gene networks under purifying selection in 4,700 cancer genomes

bioinformatics more details view paper
  • Downloaded 610 times
  • Download rankings, all-time:
    • Site-wide: 17,535 out of 70,927
    • In bioinformatics: 2,666 out of 6,940
  • Year to date:
    • Site-wide: 24,021 out of 70,927
  • Since beginning of last month:
    • Site-wide: 67,067 out of 70,927

Case-control analysis identifies shared properties of rare germline variation in cancer predisposing genes

genetics more details view paper
  • Downloaded 587 times
  • Download rankings, all-time:
    • Site-wide: 18,517 out of 70,927
    • In genetics: 1,229 out of 3,928
  • Year to date:
    • Site-wide: 38,991 out of 70,927
  • Since beginning of last month:
    • Site-wide: 42,641 out of 70,927

The Tangent copy-number inference pipeline for cancer genome analyses

bioinformatics more details view paper
  • Downloaded 534 times
  • Download rankings, all-time:
    • Site-wide: 21,007 out of 70,927
    • In bioinformatics: 3,051 out of 6,940
  • Year to date:
    • Site-wide: 7,929 out of 70,927
  • Since beginning of last month:
    • Site-wide: 19,777 out of 70,927

Calling Somatic SNVs and Indels with Mutect2

bioinformatics more details view paper
  • Downloaded 349 times
  • Download rankings, all-time:
    • Site-wide: 34,097 out of 70,927
    • In bioinformatics: 4,279 out of 6,940
  • Year to date:
    • Site-wide: 1,990 out of 70,927
  • Since beginning of last month:
    • Site-wide: 393 out of 70,927

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