Author: Rachel Karchin

Downloads per author, site-wide

Preprints

Evaluating the Evaluation of Cancer Driver Genes

• Downloaded 1,589 times
• Download rankings, all-time:
  • Site-wide: 16,180
  • In bioinformatics: 1,678
• Year to date:
  • Site-wide: 173,563
• Since beginning of last month:
  • Site-wide: 163,187

CHASMplus reveals the scope of somatic missense mutations driving human cancers

• Downloaded 1,497 times
• Download rankings, all-time:
  • Site-wide: 17,735
  • In bioinformatics: 1,884
• Year to date:
  • Site-wide: 77,486
• Since beginning of last month:
  • Site-wide: 100,373

Evidence-based calibration of computational tools for missense variant pathogenicity classification and ClinGen recommendations for clinical use of PP3/BP4 criteria

• Downloaded 1,356 times
• Download rankings, all-time:
  • Site-wide: 20,622
  • In bioinformatics: None
• Year to date:
  • Site-wide: 829
• Since beginning of last month:
  • Site-wide: 224

OpenCRAVAT, an open source collaborative platform for the annotation of human genetic variation

• Downloaded 953 times
• Download rankings, all-time:
  • Site-wide: 35,186
  • In bioinformatics: 3,711
• Year to date:
  • Site-wide: 48,487
• Since beginning of last month:
  • Site-wide: 64,294

High-throughput prediction of MHC Class I and Class II neoantigens with MHCnuggets

• Downloaded 914 times
• Download rankings, all-time:
  • Site-wide: 37,406
  • In immunology: 1,244
• Year to date:
  • Site-wide: 82,966
• Since beginning of last month:
  • Site-wide: 89,127

Assessing aneuploidy with repetitive element sequencing.

• Downloaded 912 times
• Download rankings, all-time:
  • Site-wide: 37,545
  • In cancer biology: 959
• Year to date:
  • Site-wide: 140,052
• Since beginning of last month:
  • Site-wide: 127,225

Non-invasive detection of bladder cancer through the analysis of driver gene mutations and aneuploidy

• Downloaded 670 times
• Download rankings, all-time:
  • Site-wide: 58,381
  • In cancer biology: 1,598
• Year to date:
  • Site-wide: 134,278
• Since beginning of last month:
  • Site-wide: 114,227

CRAVAT 4: Cancer-Related Analysis of Variants Toolkit

• Downloaded 618 times
• Download rankings, all-time:
  • Site-wide: 64,810
  • In bioinformatics: 6,002
• Year to date:
  • Site-wide: 135,624
• Since beginning of last month:
  • Site-wide: 149,840

Pan-cancer HLA Gene-mediated Tumor Immunogenicity and Immune Evasion

• Downloaded 511 times
• Download rankings, all-time:
  • Site-wide: 81,791
  • In systems biology: 2,143
• Year to date:
  • Site-wide: 13,470
• Since beginning of last month:
  • Site-wide: 9,042

Non-invasive detection of upper tract urothelial carcinomas through the analysis of driver gene mutations and aneuploidy in urine

• Downloaded 444 times
• Download rankings, all-time:
  • Site-wide: 95,469
  • In cancer biology: 2,772
• Year to date:
  • Site-wide: 112,712
• Since beginning of last month:
  • Site-wide: 77,547

Estimation of cancer cell fractions and clone trees from multi-region sequencing of tumors

• Downloaded 302 times
• Download rankings, all-time:
  • Site-wide: 132,149
  • In bioinformatics: 10,417
• Year to date:
  • Site-wide: 64,657
• Since beginning of last month:
  • Site-wide: 73,316