Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 59,954 bioRxiv papers from 266,503 authors.

Downloads per author, site-wide

Preprints

The Human Cell Atlas

• Downloaded 11,645 times
• Download rankings, all-time:
  • Site-wide: 77 out of 59,954
  • In cell biology: 2 out of 2,852
• Year to date:
  • Site-wide: 5,031 out of 59,954
• Since beginning of last month:
  • Site-wide: 7,228 out of 59,954

Accurate prediction of single-cell DNA methylation states using deep learning

• Downloaded 5,832 times
• Download rankings, all-time:
  • Site-wide: 296 out of 59,954
  • In bioinformatics: 55 out of 6,058
• Year to date:
  • Site-wide: 9,611 out of 59,954
• Since beginning of last month:
  • Site-wide: 5,655 out of 59,954

SC3 - consensus clustering of single-cell RNA-Seq data

• Downloaded 4,777 times
• Download rankings, all-time:
  • Site-wide: 416 out of 59,954
  • In bioinformatics: 83 out of 6,058
• Year to date:
  • Site-wide: 5,309 out of 59,954
• Since beginning of last month:
  • Site-wide: 8,150 out of 59,954

scNMT-seq enables joint profiling of chromatin accessibility DNA methylation and transcription in single cells

• Downloaded 4,470 times
• Download rankings, all-time:
  • Site-wide: 477 out of 59,954
  • In genomics: 126 out of 4,159
• Year to date:
  • Site-wide: 6,682 out of 59,954
• Since beginning of last month:
  • Site-wide: 4,444 out of 59,954

Single cell multi-omics profiling reveals a hierarchical epigenetic landscape during mammalian germ layer specification

• Downloaded 4,457 times
• Download rankings, all-time:
  • Site-wide: 482 out of 59,954
  • In developmental biology: 5 out of 1,779
• Year to date:
  • Site-wide: 72 out of 59,954
• Since beginning of last month:
  • Site-wide: 644 out of 59,954

Comparison of whole-genome bisulfite sequencing library preparation strategies identifies sources of biases affecting DNA methylation data

• Downloaded 2,541 times
• Download rankings, all-time:
  • Site-wide: 1,387 out of 59,954
  • In genomics: 325 out of 4,159
• Year to date:
  • Site-wide: 6,117 out of 59,954
• Since beginning of last month:
  • Site-wide: 21,339 out of 59,954

Single-cell transcriptome analysis of human, marmoset and mouse embryos reveals common and divergent features of preimplantation development

• Downloaded 1,944 times
• Download rankings, all-time:
  • Site-wide: 2,246 out of 59,954
  • In developmental biology: 30 out of 1,779
• Year to date:
  • Site-wide: 2,200 out of 59,954
• Since beginning of last month:
  • Site-wide: 3,727 out of 59,954

Tracking the embryonic stem cell transition from ground state pluripotency

• Downloaded 1,464 times
• Download rankings, all-time:
  • Site-wide: 3,634 out of 59,954
  • In developmental biology: 55 out of 1,779
• Year to date:
  • Site-wide: 32,768 out of 59,954
• Since beginning of last month:
  • Site-wide: 42,618 out of 59,954

Establishment In Culture Of Expanded Potential Stem Cells

• Downloaded 1,399 times
• Download rankings, all-time:
  • Site-wide: 3,911 out of 59,954
  • In developmental biology: 67 out of 1,779
• Year to date:
  • Site-wide: 30,221 out of 59,954
• Since beginning of last month:
  • Site-wide: 20,860 out of 59,954

Epigenetic resetting of human pluripotency

• Downloaded 1,137 times
• Download rankings, all-time:
  • Site-wide: 5,495 out of 59,954
  • In developmental biology: 104 out of 1,779
• Year to date:
  • Site-wide: 27,988 out of 59,954
• Since beginning of last month:
  • Site-wide: 25,889 out of 59,954

Combined single-cell profiling of expression and DNA methylation reveals splicing regulation and heterogeneity

• Downloaded 1,122 times
• Download rankings, all-time:
  • Site-wide: 5,629 out of 59,954
  • In bioinformatics: 1,071 out of 6,058
• Year to date:
  • Site-wide: 9,994 out of 59,954
• Since beginning of last month:
  • Site-wide: 15,433 out of 59,954

Screening for genes that accelerate the epigenetic ageing clock in humans reveals a role for the H3K36 methyltransferase NSD1

• Downloaded 995 times
• Download rankings, all-time:
  • Site-wide: 6,853 out of 59,954
  • In genomics: 1,119 out of 4,159
• Year to date:
  • Site-wide: 1,291 out of 59,954
• Since beginning of last month:
  • Site-wide: 3,327 out of 59,954

A single-cell transcriptomics CRISPR-activation screen identifies new epigenetic regulators of zygotic genome activation

• Downloaded 939 times
• Download rankings, all-time:
  • Site-wide: 7,472 out of 59,954
  • In developmental biology: 157 out of 1,779
• Year to date:
  • Site-wide: 1,412 out of 59,954
• Since beginning of last month:
  • Site-wide: 68 out of 59,954

5-Formylcytosine controls nucleosome positioning through covalent histone-DNA interaction

• Downloaded 921 times
• Download rankings, all-time:
  • Site-wide: 7,707 out of 59,954
  • In genomics: 1,203 out of 4,159
• Year to date:
  • Site-wide: 30,761 out of 59,954
• Since beginning of last month:
  • Site-wide: 47,702 out of 59,954

Genome-scale oscillations in DNA methylation during exit from pluripotency

• Downloaded 918 times
• Download rankings, all-time:
  • Site-wide: 7,771 out of 59,954
  • In genomics: 1,206 out of 4,159
• Year to date:
  • Site-wide: 27,199 out of 59,954
• Since beginning of last month:
  • Site-wide: 24,045 out of 59,954

A non-catalytic role of TET3 promotes open chromatin and enhances global transcription

• Downloaded 906 times
• Download rankings, all-time:
  • Site-wide: 7,924 out of 59,954
  • In developmental biology: 176 out of 1,779
• Year to date:
  • Site-wide: 13,897 out of 59,954
• Since beginning of last month:
  • Site-wide: 21,205 out of 59,954

The non-canonical SMC protein SmcHD1 antagonises TAD formation on the inactive X chromosome

• Downloaded 842 times
• Download rankings, all-time:
  • Site-wide: 8,898 out of 59,954
  • In molecular biology: 266 out of 1,842
• Year to date:
  • Site-wide: 27,874 out of 59,954
• Since beginning of last month:
  • Site-wide: 36,377 out of 59,954

Dppa2 and Dppa4 directly regulate the Dux driven zygotic transcriptional programme

• Downloaded 758 times
• Download rankings, all-time:
  • Site-wide: 10,416 out of 59,954
  • In molecular biology: 296 out of 1,842
• Year to date:
  • Site-wide: 12,128 out of 59,954
• Since beginning of last month:
  • Site-wide: 26,233 out of 59,954

Ageing affects DNA methylation drift and transcriptional cell-to-cell variability in muscle stem cells

• Downloaded 605 times
• Download rankings, all-time:
  • Site-wide: 14,243 out of 59,954
  • In genomics: 1,881 out of 4,159
• Year to date:
  • Site-wide: 4,729 out of 59,954
• Since beginning of last month:
  • Site-wide: 9,484 out of 59,954

Multi-Tissue DNA Methylation Age Predictor In Mouse

• Downloaded 503 times
• Download rankings, all-time:
  • Site-wide: 18,185 out of 59,954
  • In genomics: 2,180 out of 4,159
• Year to date:
  • Site-wide: 51,322 out of 59,954
• Since beginning of last month:
  • Site-wide: 48,476 out of 59,954