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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 59,954 bioRxiv papers from 266,503 authors.

Author: Wolf Reik

Rankings

  • All-time downloads: 48,175 (rank: 276 out of 266,503)
  • Categories:
    • bioinformatics: 11,731 (rank: 205 out of 23,749)
    • cell biology: 11,645 (rank: 47 (tie) out of 17,463)
    • developmental biology: 12,246 (rank: 1 out of 9,974)
    • genomics: 10,953 (rank: 856 out of 31,149)
    • molecular biology: 1,600 (rank: 859 out of 12,015)

Downloads per author, site-wide

Preprints

The Human Cell Atlas

cell biology more details view paper
  • Downloaded 11,645 times
  • Download rankings, all-time:
    • Site-wide: 77 out of 59,954
    • In cell biology: 2 out of 2,852
  • Year to date:
    • Site-wide: 5,031 out of 59,954
  • Since beginning of last month:
    • Site-wide: 7,228 out of 59,954

Accurate prediction of single-cell DNA methylation states using deep learning

bioinformatics more details view paper
  • Downloaded 5,832 times
  • Download rankings, all-time:
    • Site-wide: 296 out of 59,954
    • In bioinformatics: 55 out of 6,058
  • Year to date:
    • Site-wide: 9,611 out of 59,954
  • Since beginning of last month:
    • Site-wide: 5,655 out of 59,954

SC3 - consensus clustering of single-cell RNA-Seq data

bioinformatics more details view paper
  • Downloaded 4,777 times
  • Download rankings, all-time:
    • Site-wide: 416 out of 59,954
    • In bioinformatics: 83 out of 6,058
  • Year to date:
    • Site-wide: 5,309 out of 59,954
  • Since beginning of last month:
    • Site-wide: 8,150 out of 59,954

scNMT-seq enables joint profiling of chromatin accessibility DNA methylation and transcription in single cells

genomics more details view paper
  • Downloaded 4,470 times
  • Download rankings, all-time:
    • Site-wide: 477 out of 59,954
    • In genomics: 126 out of 4,159
  • Year to date:
    • Site-wide: 6,682 out of 59,954
  • Since beginning of last month:
    • Site-wide: 4,444 out of 59,954

Single cell multi-omics profiling reveals a hierarchical epigenetic landscape during mammalian germ layer specification

developmental biology more details view paper
  • Downloaded 4,457 times
  • Download rankings, all-time:
    • Site-wide: 482 out of 59,954
    • In developmental biology: 5 out of 1,779
  • Year to date:
    • Site-wide: 72 out of 59,954
  • Since beginning of last month:
    • Site-wide: 644 out of 59,954

Comparison of whole-genome bisulfite sequencing library preparation strategies identifies sources of biases affecting DNA methylation data

genomics more details view paper
  • Downloaded 2,541 times
  • Download rankings, all-time:
    • Site-wide: 1,387 out of 59,954
    • In genomics: 325 out of 4,159
  • Year to date:
    • Site-wide: 6,117 out of 59,954
  • Since beginning of last month:
    • Site-wide: 21,339 out of 59,954

Single-cell transcriptome analysis of human, marmoset and mouse embryos reveals common and divergent features of preimplantation development

developmental biology more details view paper
  • Downloaded 1,944 times
  • Download rankings, all-time:
    • Site-wide: 2,246 out of 59,954
    • In developmental biology: 30 out of 1,779
  • Year to date:
    • Site-wide: 2,200 out of 59,954
  • Since beginning of last month:
    • Site-wide: 3,727 out of 59,954

Tracking the embryonic stem cell transition from ground state pluripotency

developmental biology more details view paper
  • Downloaded 1,464 times
  • Download rankings, all-time:
    • Site-wide: 3,634 out of 59,954
    • In developmental biology: 55 out of 1,779
  • Year to date:
    • Site-wide: 32,768 out of 59,954
  • Since beginning of last month:
    • Site-wide: 42,618 out of 59,954

Establishment In Culture Of Expanded Potential Stem Cells

developmental biology more details view paper
  • Downloaded 1,399 times
  • Download rankings, all-time:
    • Site-wide: 3,911 out of 59,954
    • In developmental biology: 67 out of 1,779
  • Year to date:
    • Site-wide: 30,221 out of 59,954
  • Since beginning of last month:
    • Site-wide: 20,860 out of 59,954

Epigenetic resetting of human pluripotency

developmental biology more details view paper
  • Downloaded 1,137 times
  • Download rankings, all-time:
    • Site-wide: 5,495 out of 59,954
    • In developmental biology: 104 out of 1,779
  • Year to date:
    • Site-wide: 27,988 out of 59,954
  • Since beginning of last month:
    • Site-wide: 25,889 out of 59,954

Combined single-cell profiling of expression and DNA methylation reveals splicing regulation and heterogeneity

bioinformatics more details view paper
  • Downloaded 1,122 times
  • Download rankings, all-time:
    • Site-wide: 5,629 out of 59,954
    • In bioinformatics: 1,071 out of 6,058
  • Year to date:
    • Site-wide: 9,994 out of 59,954
  • Since beginning of last month:
    • Site-wide: 15,433 out of 59,954

Screening for genes that accelerate the epigenetic ageing clock in humans reveals a role for the H3K36 methyltransferase NSD1

genomics more details view paper
  • Downloaded 995 times
  • Download rankings, all-time:
    • Site-wide: 6,853 out of 59,954
    • In genomics: 1,119 out of 4,159
  • Year to date:
    • Site-wide: 1,291 out of 59,954
  • Since beginning of last month:
    • Site-wide: 3,327 out of 59,954

A single-cell transcriptomics CRISPR-activation screen identifies new epigenetic regulators of zygotic genome activation

developmental biology more details view paper
  • Downloaded 939 times
  • Download rankings, all-time:
    • Site-wide: 7,472 out of 59,954
    • In developmental biology: 157 out of 1,779
  • Year to date:
    • Site-wide: 1,412 out of 59,954
  • Since beginning of last month:
    • Site-wide: 68 out of 59,954

5-Formylcytosine controls nucleosome positioning through covalent histone-DNA interaction

genomics more details view paper
  • Downloaded 921 times
  • Download rankings, all-time:
    • Site-wide: 7,707 out of 59,954
    • In genomics: 1,203 out of 4,159
  • Year to date:
    • Site-wide: 30,761 out of 59,954
  • Since beginning of last month:
    • Site-wide: 47,702 out of 59,954

Genome-scale oscillations in DNA methylation during exit from pluripotency

genomics more details view paper
  • Downloaded 918 times
  • Download rankings, all-time:
    • Site-wide: 7,771 out of 59,954
    • In genomics: 1,206 out of 4,159
  • Year to date:
    • Site-wide: 27,199 out of 59,954
  • Since beginning of last month:
    • Site-wide: 24,045 out of 59,954

A non-catalytic role of TET3 promotes open chromatin and enhances global transcription

developmental biology more details view paper
  • Downloaded 906 times
  • Download rankings, all-time:
    • Site-wide: 7,924 out of 59,954
    • In developmental biology: 176 out of 1,779
  • Year to date:
    • Site-wide: 13,897 out of 59,954
  • Since beginning of last month:
    • Site-wide: 21,205 out of 59,954

The non-canonical SMC protein SmcHD1 antagonises TAD formation on the inactive X chromosome

molecular biology more details view paper
  • Downloaded 842 times
  • Download rankings, all-time:
    • Site-wide: 8,898 out of 59,954
    • In molecular biology: 266 out of 1,842
  • Year to date:
    • Site-wide: 27,874 out of 59,954
  • Since beginning of last month:
    • Site-wide: 36,377 out of 59,954

Dppa2 and Dppa4 directly regulate the Dux driven zygotic transcriptional programme

molecular biology more details view paper
  • Downloaded 758 times
  • Download rankings, all-time:
    • Site-wide: 10,416 out of 59,954
    • In molecular biology: 296 out of 1,842
  • Year to date:
    • Site-wide: 12,128 out of 59,954
  • Since beginning of last month:
    • Site-wide: 26,233 out of 59,954

Ageing affects DNA methylation drift and transcriptional cell-to-cell variability in muscle stem cells

genomics more details view paper
  • Downloaded 605 times
  • Download rankings, all-time:
    • Site-wide: 14,243 out of 59,954
    • In genomics: 1,881 out of 4,159
  • Year to date:
    • Site-wide: 4,729 out of 59,954
  • Since beginning of last month:
    • Site-wide: 9,484 out of 59,954

Multi-Tissue DNA Methylation Age Predictor In Mouse

genomics more details view paper
  • Downloaded 503 times
  • Download rankings, all-time:
    • Site-wide: 18,185 out of 59,954
    • In genomics: 2,180 out of 4,159
  • Year to date:
    • Site-wide: 51,322 out of 59,954
  • Since beginning of last month:
    • Site-wide: 48,476 out of 59,954

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