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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 62,933 bioRxiv papers from 279,142 authors.

Author: Páll Melsted

  • ORCiD: http://orcid.org/0000-0002-8418-6724
  • Most recently observed institution: Faculty of Industrial Engineering, Mechanical Engineering and Computer Science, University of Iceland

Rankings

  • All-time downloads: 32,970 (rank: 508 out of 279,142)
  • Categories:
    • bioinformatics: 32,970 (rank: 52 out of 24,417)

Downloads per author, site-wide

Preprints

Differential analysis of RNA-Seq incorporating quantification uncertainty

bioinformatics more details view paper
  • Downloaded 7,642 times
  • Download rankings, all-time:
    • Site-wide: 176 out of 62,933
    • In bioinformatics: 30 out of 6,251
  • Year to date:
    • Site-wide: 2,164 out of 62,933
  • Since beginning of last month:
    • Site-wide: 3,746 out of 62,933

Mash: fast genome and metagenome distance estimation using MinHash

bioinformatics more details view paper
  • Downloaded 6,359 times
  • Download rankings, all-time:
    • Site-wide: 261 out of 62,933
    • In bioinformatics: 46 out of 6,251
  • Year to date:
    • Site-wide: 14,136 out of 62,933
  • Since beginning of last month:
    • Site-wide: 10,941 out of 62,933

Identification of transcriptional signatures for cell types from single-cell RNA-Seq

bioinformatics more details view paper
  • Downloaded 5,974 times
  • Download rankings, all-time:
    • Site-wide: 295 out of 62,933
    • In bioinformatics: 52 out of 6,251
  • Year to date:
    • Site-wide: 924 out of 62,933
  • Since beginning of last month:
    • Site-wide: 3,596 out of 62,933

Modular and efficient pre-processing of single-cell RNA-seq

bioinformatics more details view paper
  • Downloaded 4,121 times
  • Download rankings, all-time:
    • Site-wide: 594 out of 62,933
    • In bioinformatics: 118 out of 6,251
  • Year to date:
    • Site-wide: 99 out of 62,933
  • Since beginning of last month:
    • Site-wide: 60 out of 62,933

Fusion detection and quantification by pseudoalignment

bioinformatics more details view paper
  • Downloaded 1,972 times
  • Download rankings, all-time:
    • Site-wide: 2,299 out of 62,933
    • In bioinformatics: 471 out of 6,251
  • Year to date:
    • Site-wide: 4,135 out of 62,933
  • Since beginning of last month:
    • Site-wide: 6,383 out of 62,933

The Barcode, UMI, Set format and BUStools

bioinformatics more details view paper
  • Downloaded 1,772 times
  • Download rankings, all-time:
    • Site-wide: 2,751 out of 62,933
    • In bioinformatics: 558 out of 6,251
  • Year to date:
    • Site-wide: 1,893 out of 62,933
  • Since beginning of last month:
    • Site-wide: 7,592 out of 62,933

A direct comparison of genome alignment and transcriptome pseudoalignment

bioinformatics more details view paper
  • Downloaded 1,401 times
  • Download rankings, all-time:
    • Site-wide: 4,079 out of 62,933
    • In bioinformatics: 814 out of 6,251
  • Year to date:
    • Site-wide: 2,588 out of 62,933
  • Since beginning of last month:
    • Site-wide: 1,520 out of 62,933

KmerStream: Streaming algorithms for k-mer abundance estimation

bioinformatics more details view paper
  • Downloaded 1,298 times
  • Download rankings, all-time:
    • Site-wide: 4,617 out of 62,933
    • In bioinformatics: 907 out of 6,251
  • Year to date:
    • Site-wide: 53,711 out of 62,933
  • Since beginning of last month:
    • Site-wide: 50,277 out of 62,933

The Lair: A resource for exploratory analysis of published RNA-Seq data

bioinformatics more details view paper
  • Downloaded 944 times
  • Download rankings, all-time:
    • Site-wide: 7,756 out of 62,933
    • In bioinformatics: 1,374 out of 6,251
  • Year to date:
    • Site-wide: 56,588 out of 62,933
  • Since beginning of last month:
    • Site-wide: 60,645 out of 62,933

BamHash: a checksum program for verifying the integrity of sequence data

bioinformatics more details view paper
  • Downloaded 677 times
  • Download rankings, all-time:
    • Site-wide: 12,811 out of 62,933
    • In bioinformatics: 2,099 out of 6,251
  • Year to date:
    • Site-wide: 53,459 out of 62,933
  • Since beginning of last month:
    • Site-wide: 51,205 out of 62,933

Bifrost – Highly parallel construction and indexing of colored and compacted de Bruijn graphs

bioinformatics more details view paper
  • Downloaded 481 times
  • Download rankings, all-time:
    • Site-wide: 20,153 out of 62,933
    • In bioinformatics: 2,962 out of 6,251
  • Year to date:
    • Site-wide: 5,230 out of 62,933
  • Since beginning of last month:
    • Site-wide: 4,117 out of 62,933

chopBAI: BAM index reduction solves I/O bottlenecks in the joint analysis of large sequencing cohorts

bioinformatics more details view paper
  • Downloaded 329 times
  • Download rankings, all-time:
    • Site-wide: 30,349 out of 62,933
    • In bioinformatics: 3,947 out of 6,251
  • Year to date:
    • Site-wide: 59,203 out of 62,933
  • Since beginning of last month:
    • Site-wide: 59,346 out of 62,933

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