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Author: Ewan Birney

Rankings

  • All-time downloads: 56,619 (rank: 4,152 )
  • Categories:
    • bioinformatics: 3,712 (rank: 4,528 (tie) )
    • cancer biology: 603 (rank: 21,353 (tie) )
    • cell biology: 16,714 (rank: 111 )
    • epidemiology: 2,365 (rank: 6,814 (tie) )
    • genetic and genomic medicine: 1,879 (rank: 2,883 )
    • genetics: 1,709 (rank: 12,644 (tie) )
    • genomics: 24,969 (rank: 544 )
    • health informatics: 526 (rank: 2,281 (tie) )
    • microbiology: 814 (rank: 25,000 (tie) )

Downloads per author, site-wide

Preprints

The Human Cell Atlas

cell biology more details view paper
  • Downloaded 13,118 times
  • Download rankings, all-time:
    • Site-wide: 904
    • In cell biology: 8
  • Year to date:
    • Site-wide: 21,828
  • Since beginning of last month:
    • Site-wide: 20,563

RNA modifications detection by comparative Nanopore direct RNA sequencing

genomics more details view paper
  • Downloaded 6,466 times
  • Download rankings, all-time:
    • Site-wide: 2,235
    • In genomics: 165
  • Year to date:
    • Site-wide: 20,832
  • Since beginning of last month:
    • Site-wide: 23,147

Genomics in healthcare: GA4GH looks to 2022

genomics more details view paper
  • Downloaded 5,591 times
  • Download rankings, all-time:
    • Site-wide: 2,720
    • In genomics: 229
  • Year to date:
    • Site-wide: 8,499
  • Since beginning of last month:
    • Site-wide: 5,692

Common genetic variation drives molecular heterogeneity in human iPSCs

genomics more details view paper
  • Downloaded 2,952 times
  • Download rankings, all-time:
    • Site-wide: 6,666
    • In genomics: 600
  • Year to date:
    • Site-wide: 133,023
  • Since beginning of last month:
    • Site-wide: 117,253

Visualization of loop extrusion by DNA nanoscale tracing in single human cells

cell biology more details view paper
  • Downloaded 2,903 times
  • Download rankings, all-time:
    • Site-wide: 6,830
    • In cell biology: 168
  • Year to date:
    • Site-wide: 4,663
  • Since beginning of last month:
    • Site-wide: 1,128

GARFIELD - GWAS Analysis of Regulatory or Functional Information Enrichment with LD correction

genomics more details view paper
  • Downloaded 2,713 times
  • Download rankings, all-time:
    • Site-wide: 7,534
    • In genomics: 689
  • Year to date:
    • Site-wide: 76,287
  • Since beginning of last month:
    • Site-wide: 66,379

ChromoTrace: Reconstruction of 3D Chromosome Configurations by Super-Resolution Microscopy

bioinformatics more details view paper
  • Downloaded 2,627 times
  • Download rankings, all-time:
    • Site-wide: 7,923
    • In bioinformatics: 744
  • Year to date:
    • Site-wide: 124,621
  • Since beginning of last month:
    • Site-wide: 131,069

Genomic reconstruction of the SARS-CoV-2 epidemic in England

epidemiology more details view paper
  • Downloaded 2,429 times
  • Download rankings, all-time:
    • Site-wide: 8,871
    • In epidemiology: 714
  • Year to date:
    • Site-wide: 38,831
  • Since beginning of last month:
    • Site-wide: 55,492

Genomic analysis reveals a functional role for myocardial trabeculae in adults

genomics more details view paper
  • Downloaded 1,995 times
  • Download rankings, all-time:
    • Site-wide: 11,917
    • In genomics: 1,072
  • Year to date:
    • Site-wide: 87,379
  • Since beginning of last month:
    • Site-wide: 77,376

Dynamic, adaptive sampling during nanopore sequencing using Bayesian experimental design

genomics more details view paper
  • Downloaded 1,814 times
  • Download rankings, all-time:
    • Site-wide: 13,684
    • In genomics: 1,543
  • Year to date:
    • Site-wide: 9,455
  • Since beginning of last month:
    • Site-wide: 9,257

LiMMBo: a simple, scalable approach for linear mixed models in high-dimensional genetic association studies

genomics more details view paper
  • Downloaded 1,495 times
  • Download rankings, all-time:
    • Site-wide: 18,332
    • In genomics: 1,615
  • Year to date:
    • Site-wide: 98,883
  • Since beginning of last month:
    • Site-wide: 113,066

Genetic variation affects morphological retinal phenotypes extracted from UK Biobank Optical Coherence Tomography images

genetic and genomic medicine more details view paper
  • Downloaded 1,284 times
  • Download rankings, all-time:
    • Site-wide: 23,252
    • In genetic and genomic medicine: 116
  • Year to date:
    • Site-wide: 68,447
  • Since beginning of last month:
    • Site-wide: 79,193

Identifying extrinsic versus intrinsic drivers of variation in cell behaviour in human iPS cell lines from healthy donors

cell biology more details view paper
  • Downloaded 1,264 times
  • Download rankings, all-time:
    • Site-wide: 23,823
    • In cell biology: 741
  • Year to date:
    • Site-wide: 101,962
  • Since beginning of last month:
    • Site-wide: 94,222

A large cross-ancestry meta-analysis of genome-wide association studies identifies 69 novel risk loci for primary open-angle glaucoma and includes a genetic link with Alzheimer's disease

genetics more details view paper
  • Downloaded 1,134 times
  • Download rankings, all-time:
    • Site-wide: 28,168
    • In genetics: 1,155
  • Year to date:
    • Site-wide: 71,436
  • Since beginning of last month:
    • Site-wide: 70,534

FORGE : A tool to discover cell specific enrichments of GWAS associated SNPs in regulatory regions.

bioinformatics more details view paper
  • Downloaded 1,122 times
  • Download rankings, all-time:
    • Site-wide: 28,618
    • In bioinformatics: 2,920
  • Year to date:
    • Site-wide: 121,021
  • Since beginning of last month:
    • Site-wide: 162,413

CNest: A Novel Copy Number Association Discovery Method Uncovers 862 New Associations from 200,629 Whole Exome Sequence Datasets in the UK Biobank

genomics more details view paper
  • Downloaded 1,062 times
  • Download rankings, all-time:
    • Site-wide: 31,063
    • In genomics: 3,298
  • Year to date:
    • Site-wide: 8,461
  • Since beginning of last month:
    • Site-wide: 23,492

Long-read sequencing of diagnosis and post-therapy medulloblastoma reveals complex rearrangement patterns and epigenetic signatures

cancer biology more details view paper
  • Downloaded 1,016 times
  • Download rankings, all-time:
    • Site-wide: 33,230
    • In cancer biology: 1,812
  • Year to date:
    • Site-wide: 1,639
  • Since beginning of last month:
    • Site-wide: 4,997

Nanopore ReCappable Sequencing maps SARS-CoV-2 5' capping sites and provides new insights into the structure of sgRNAs

genomics more details view paper
  • Downloaded 866 times
  • Download rankings, all-time:
    • Site-wide: 42,049
    • In genomics: 3,435
  • Year to date:
    • Site-wide: 23,653
  • Since beginning of last month:
    • Site-wide: 40,571

Genomic variations and epigenomic landscape of the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel

genomics more details view paper
  • Downloaded 779 times
  • Download rankings, all-time:
    • Site-wide: 49,147
    • In genomics: 3,701
  • Year to date:
    • Site-wide: 45,069
  • Since beginning of last month:
    • Site-wide: 87,572

The human leukemia virus HTLV-1 alters the structure and transcription of host chromatin in cis

microbiology more details view paper
  • Downloaded 715 times
  • Download rankings, all-time:
    • Site-wide: 55,481
    • In microbiology: 3,135
  • Year to date:
    • Site-wide: 164,525
  • Since beginning of last month:
    • Site-wide: 161,049

The Gene Curation Coalition: A global effort to harmonize gene-disease evidence resources

genetic and genomic medicine more details view paper
  • Downloaded 659 times
  • Download rankings, all-time:
    • Site-wide: 62,133
    • In genetic and genomic medicine: 576
  • Year to date:
    • Site-wide: 3,281
  • Since beginning of last month:
    • Site-wide: 5,437

Interactions between genetic variation and cellular environment in skeletal muscle gene expression

genetics more details view paper
  • Downloaded 622 times
  • Download rankings, all-time:
    • Site-wide: 67,017
    • In genetics: 2,529
  • Year to date:
    • Site-wide: 189,406
  • Since beginning of last month:
    • Site-wide: 177,902

Big Data Analysis of Electronic Health Records: Clinically interpretable representations of older adult inpatient trajectories using time-series numerical data and Hidden Markov Models

health informatics more details view paper
  • Downloaded 603 times
  • Download rankings, all-time:
    • Site-wide: 69,817
    • In health informatics: 309
  • Year to date:
    • Site-wide: 41,388
  • Since beginning of last month:
    • Site-wide: 34,571

The contribution of common regulatory and protein-coding TYR variants in the genetic architecture of albinism

genetic and genomic medicine more details view paper
  • Downloaded 496 times
  • Download rankings, all-time:
    • Site-wide: 88,454
    • In genetic and genomic medicine: 921
  • Year to date:
    • Site-wide: 10,370
  • Since beginning of last month:
    • Site-wide: 10,209

The Medaka Inbred Kiyosu-Karlsruhe (MIKK) Panel

genomics more details view paper
  • Downloaded 426 times
  • Download rankings, all-time:
    • Site-wide: 103,918
    • In genomics: 6,081
  • Year to date:
    • Site-wide: 72,065
  • Since beginning of last month:
    • Site-wide: 72,527

Sub-cellular level resolution of common genetic variation in the photoreceptor layer identifies continuum between rare disease and common variation

genetic and genomic medicine more details view paper
  • Downloaded 287 times
  • Download rankings, all-time:
    • Site-wide: 141,939
    • In genetic and genomic medicine: None
  • Year to date:
    • Site-wide: 11,475
  • Since beginning of last month:
    • Site-wide: 29,514

Selective clonal persistence of human retroviruses in vivo: radial chromatin organization, integration site and host transcription

microbiology more details view paper
  • Downloaded 181 times
  • Download rankings, all-time:
    • Site-wide: 171,519
    • In microbiology: 13,089
  • Year to date:
    • Site-wide: 44,364
  • Since beginning of last month:
    • Site-wide: 52,912

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