Author: Ewan Birney

Downloads per author, site-wide

Preprints

The Human Cell Atlas

• Downloaded 13,118 times
• Download rankings, all-time:
  • Site-wide: 904
  • In cell biology: 8
• Year to date:
  • Site-wide: 21,828
• Since beginning of last month:
  • Site-wide: 20,563

RNA modifications detection by comparative Nanopore direct RNA sequencing

• Downloaded 6,466 times
• Download rankings, all-time:
  • Site-wide: 2,235
  • In genomics: 165
• Year to date:
  • Site-wide: 20,832
• Since beginning of last month:
  • Site-wide: 23,147

Genomics in healthcare: GA4GH looks to 2022

• Downloaded 5,591 times
• Download rankings, all-time:
  • Site-wide: 2,720
  • In genomics: 229
• Year to date:
  • Site-wide: 8,499
• Since beginning of last month:
  • Site-wide: 5,692

Common genetic variation drives molecular heterogeneity in human iPSCs

• Downloaded 2,952 times
• Download rankings, all-time:
  • Site-wide: 6,666
  • In genomics: 600
• Year to date:
  • Site-wide: 133,023
• Since beginning of last month:
  • Site-wide: 117,253

Visualization of loop extrusion by DNA nanoscale tracing in single human cells

• Downloaded 2,903 times
• Download rankings, all-time:
  • Site-wide: 6,830
  • In cell biology: 168
• Year to date:
  • Site-wide: 4,663
• Since beginning of last month:
  • Site-wide: 1,128

GARFIELD - GWAS Analysis of Regulatory or Functional Information Enrichment with LD correction

• Downloaded 2,713 times
• Download rankings, all-time:
  • Site-wide: 7,534
  • In genomics: 689
• Year to date:
  • Site-wide: 76,287
• Since beginning of last month:
  • Site-wide: 66,379

ChromoTrace: Reconstruction of 3D Chromosome Configurations by Super-Resolution Microscopy

• Downloaded 2,627 times
• Download rankings, all-time:
  • Site-wide: 7,923
  • In bioinformatics: 744
• Year to date:
  • Site-wide: 124,621
• Since beginning of last month:
  • Site-wide: 131,069

Genomic reconstruction of the SARS-CoV-2 epidemic in England

• Downloaded 2,429 times
• Download rankings, all-time:
  • Site-wide: 8,871
  • In epidemiology: 714
• Year to date:
  • Site-wide: 38,831
• Since beginning of last month:
  • Site-wide: 55,492

Genomic analysis reveals a functional role for myocardial trabeculae in adults

• Downloaded 1,995 times
• Download rankings, all-time:
  • Site-wide: 11,917
  • In genomics: 1,072
• Year to date:
  • Site-wide: 87,379
• Since beginning of last month:
  • Site-wide: 77,376

Dynamic, adaptive sampling during nanopore sequencing using Bayesian experimental design

• Downloaded 1,814 times
• Download rankings, all-time:
  • Site-wide: 13,684
  • In genomics: 1,543
• Year to date:
  • Site-wide: 9,455
• Since beginning of last month:
  • Site-wide: 9,257

LiMMBo: a simple, scalable approach for linear mixed models in high-dimensional genetic association studies

• Downloaded 1,495 times
• Download rankings, all-time:
  • Site-wide: 18,332
  • In genomics: 1,615
• Year to date:
  • Site-wide: 98,883
• Since beginning of last month:
  • Site-wide: 113,066

Genetic variation affects morphological retinal phenotypes extracted from UK Biobank Optical Coherence Tomography images

• Downloaded 1,284 times
• Download rankings, all-time:
  • Site-wide: 23,252
  • In genetic and genomic medicine: 116
• Year to date:
  • Site-wide: 68,447
• Since beginning of last month:
  • Site-wide: 79,193

Identifying extrinsic versus intrinsic drivers of variation in cell behaviour in human iPS cell lines from healthy donors

• Downloaded 1,264 times
• Download rankings, all-time:
  • Site-wide: 23,823
  • In cell biology: 741
• Year to date:
  • Site-wide: 101,962
• Since beginning of last month:
  • Site-wide: 94,222

A large cross-ancestry meta-analysis of genome-wide association studies identifies 69 novel risk loci for primary open-angle glaucoma and includes a genetic link with Alzheimer's disease

• Downloaded 1,134 times
• Download rankings, all-time:
  • Site-wide: 28,168
  • In genetics: 1,155
• Year to date:
  • Site-wide: 71,436
• Since beginning of last month:
  • Site-wide: 70,534

FORGE : A tool to discover cell specific enrichments of GWAS associated SNPs in regulatory regions.

• Downloaded 1,122 times
• Download rankings, all-time:
  • Site-wide: 28,618
  • In bioinformatics: 2,920
• Year to date:
  • Site-wide: 121,021
• Since beginning of last month:
  • Site-wide: 162,413

CNest: A Novel Copy Number Association Discovery Method Uncovers 862 New Associations from 200,629 Whole Exome Sequence Datasets in the UK Biobank

• Downloaded 1,062 times
• Download rankings, all-time:
  • Site-wide: 31,063
  • In genomics: 3,298
• Year to date:
  • Site-wide: 8,461
• Since beginning of last month:
  • Site-wide: 23,492

Long-read sequencing of diagnosis and post-therapy medulloblastoma reveals complex rearrangement patterns and epigenetic signatures

• Downloaded 1,016 times
• Download rankings, all-time:
  • Site-wide: 33,230
  • In cancer biology: 1,812
• Year to date:
  • Site-wide: 1,639
• Since beginning of last month:
  • Site-wide: 4,997

Nanopore ReCappable Sequencing maps SARS-CoV-2 5' capping sites and provides new insights into the structure of sgRNAs

• Downloaded 866 times
• Download rankings, all-time:
  • Site-wide: 42,049
  • In genomics: 3,435
• Year to date:
  • Site-wide: 23,653
• Since beginning of last month:
  • Site-wide: 40,571

Genomic variations and epigenomic landscape of the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel

• Downloaded 779 times
• Download rankings, all-time:
  • Site-wide: 49,147
  • In genomics: 3,701
• Year to date:
  • Site-wide: 45,069
• Since beginning of last month:
  • Site-wide: 87,572

The human leukemia virus HTLV-1 alters the structure and transcription of host chromatin in cis

• Downloaded 715 times
• Download rankings, all-time:
  • Site-wide: 55,481
  • In microbiology: 3,135
• Year to date:
  • Site-wide: 164,525
• Since beginning of last month:
  • Site-wide: 161,049

The Gene Curation Coalition: A global effort to harmonize gene-disease evidence resources

• Downloaded 659 times
• Download rankings, all-time:
  • Site-wide: 62,133
  • In genetic and genomic medicine: 576
• Year to date:
  • Site-wide: 3,281
• Since beginning of last month:
  • Site-wide: 5,437

Interactions between genetic variation and cellular environment in skeletal muscle gene expression

• Downloaded 622 times
• Download rankings, all-time:
  • Site-wide: 67,017
  • In genetics: 2,529
• Year to date:
  • Site-wide: 189,406
• Since beginning of last month:
  • Site-wide: 177,902

Big Data Analysis of Electronic Health Records: Clinically interpretable representations of older adult inpatient trajectories using time-series numerical data and Hidden Markov Models

• Downloaded 603 times
• Download rankings, all-time:
  • Site-wide: 69,817
  • In health informatics: 309
• Year to date:
  • Site-wide: 41,388
• Since beginning of last month:
  • Site-wide: 34,571

The contribution of common regulatory and protein-coding TYR variants in the genetic architecture of albinism

• Downloaded 496 times
• Download rankings, all-time:
  • Site-wide: 88,454
  • In genetic and genomic medicine: 921
• Year to date:
  • Site-wide: 10,370
• Since beginning of last month:
  • Site-wide: 10,209

The Medaka Inbred Kiyosu-Karlsruhe (MIKK) Panel

• Downloaded 426 times
• Download rankings, all-time:
  • Site-wide: 103,918
  • In genomics: 6,081
• Year to date:
  • Site-wide: 72,065
• Since beginning of last month:
  • Site-wide: 72,527

Sub-cellular level resolution of common genetic variation in the photoreceptor layer identifies continuum between rare disease and common variation

• Downloaded 287 times
• Download rankings, all-time:
  • Site-wide: 141,939
  • In genetic and genomic medicine: None
• Year to date:
  • Site-wide: 11,475
• Since beginning of last month:
  • Site-wide: 29,514

Selective clonal persistence of human retroviruses in vivo: radial chromatin organization, integration site and host transcription

• Downloaded 181 times
• Download rankings, all-time:
  • Site-wide: 171,519
  • In microbiology: 13,089
• Year to date:
  • Site-wide: 44,364
• Since beginning of last month:
  • Site-wide: 52,912