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Author: Pieter C. Dorrestein

  • ORCiD: http://orcid.org/0000-0002-3003-1030
  • Most recently observed institution: Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, USA 3

Rankings

  • All-time downloads: 24,284 (rank: 1,415 out of 338,787)
  • Categories:
    • biochemistry: 1,920 (rank: 640 out of 14,428)
    • bioinformatics: 12,589 (rank: 247 out of 29,074)
    • evolutionary biology: 477 (rank: 9,144 (tie) out of 17,782)
    • microbiology: 7,703 (rank: 495 out of 36,051)
    • pharmacology and toxicology: 382 (rank: 1,348 (tie) out of 4,322)
    • plant biology: 595 (rank: 4,002 (tie) out of 12,722)
    • synthetic biology: 365 (rank: 2,724 (tie) out of 3,461)
    • systems biology: 253 (rank: 8,167 (tie) out of 10,191)

Downloads per author, site-wide

Preprints

MASST: A Web-based Basic Mass Spectrometry Search Tool for Molecules to Search Public Data.

bioinformatics more details view paper
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    • In bioinformatics: 78 out of 7,553
  • Year to date:
    • Site-wide: 6,000 out of 78,246
  • Since beginning of last month:
    • Site-wide: 8,298 out of 78,246

American Gut: an Open Platform for Citizen-Science Microbiome Research

microbiology more details view paper
  • Downloaded 3,210 times
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    • In microbiology: 69 out of 6,496
  • Year to date:
    • Site-wide: 10,371 out of 78,246
  • Since beginning of last month:
    • Site-wide: 8,125 out of 78,246

Feature-based Molecular Networking in the GNPS Analysis Environment

bioinformatics more details view paper
  • Downloaded 1,609 times
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    • In bioinformatics: 836 out of 7,553
  • Year to date:
    • Site-wide: 639 out of 78,246
  • Since beginning of last month:
    • Site-wide: 724 out of 78,246

Chemical Impacts of the Microbiome Across Scales Reveal Novel Conjugated Bile Acids

microbiology more details view paper
  • Downloaded 1,214 times
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    • In microbiology: 324 out of 6,496
  • Year to date:
    • Site-wide: 6,115 out of 78,246
  • Since beginning of last month:
    • Site-wide: 17,956 out of 78,246

Identification of the bacterial biosynthetic gene clusters of the oral microbiome illuminates the unexplored social language of bacteria during health and disease

microbiology more details view paper
  • Downloaded 1,111 times
  • Download rankings, all-time:
    • Site-wide: 7,988 out of 78,246
    • In microbiology: 386 out of 6,496
  • Year to date:
    • Site-wide: 21,171 out of 78,246
  • Since beginning of last month:
    • Site-wide: 19,459 out of 78,246

Cutibacterium acnes antibiotic production shapes niche competition in the human skin microbiome

microbiology more details view paper
  • Downloaded 934 times
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    • Site-wide: 10,604 out of 78,246
    • In microbiology: 524 out of 6,496
  • Year to date:
    • Site-wide: 10,976 out of 78,246
  • Since beginning of last month:
    • Site-wide: 9,576 out of 78,246

Significance estimation for large scale untargeted metabolomics annotations

bioinformatics more details view paper
  • Downloaded 886 times
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    • Site-wide: 11,560 out of 78,246
    • In bioinformatics: 1,913 out of 7,553
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    • Site-wide: 61,751 out of 78,246
  • Since beginning of last month:
    • Site-wide: 57,456 out of 78,246

MolNetEnhancer: enhanced molecular networks by integrating metabolome mining and annotation tools

biochemistry more details view paper
  • Downloaded 793 times
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    • Site-wide: 13,654 out of 78,246
    • In biochemistry: 292 out of 2,462
  • Year to date:
    • Site-wide: 19,145 out of 78,246
  • Since beginning of last month:
    • Site-wide: 23,522 out of 78,246

Algorithmic Learning for Auto-deconvolution of GC-MS Data to Enable Molecular Networking within GNPS.

bioinformatics more details view paper
  • Downloaded 709 times
  • Download rankings, all-time:
    • Site-wide: 16,157 out of 78,246
    • In bioinformatics: 2,486 out of 7,553
  • Year to date:
    • Site-wide: 678 out of 78,246
  • Since beginning of last month:
    • Site-wide: 2,856 out of 78,246

Implementations of the chemical structural and compositional similarity metric in R and Python

bioinformatics more details view paper
  • Downloaded 698 times
  • Download rankings, all-time:
    • Site-wide: 16,504 out of 78,246
    • In bioinformatics: 2,533 out of 7,553
  • Year to date:
    • Site-wide: 38,675 out of 78,246
  • Since beginning of last month:
    • Site-wide: 32,615 out of 78,246

De Novo Peptide Sequencing Reveals a Vast Cyclopeptidome in Human Gut and Other Environments

bioinformatics more details view paper
  • Downloaded 690 times
  • Download rankings, all-time:
    • Site-wide: 16,805 out of 78,246
    • In bioinformatics: 2,569 out of 7,553
  • Year to date:
    • Site-wide: 23,903 out of 78,246
  • Since beginning of last month:
    • Site-wide: 30,970 out of 78,246

MetaRiPPquest: A Peptidogenomics Approach for the Discovery of Ribosomally Synthesized and Post-translationally Modified Peptides

bioinformatics more details view paper
  • Downloaded 690 times
  • Download rankings, all-time:
    • Site-wide: 16,798 out of 78,246
    • In bioinformatics: 2,566 out of 7,553
  • Year to date:
    • Site-wide: 54,386 out of 78,246
  • Since beginning of last month:
    • Site-wide: 34,813 out of 78,246

Untargeted Mass Spectrometry-Based Metabolomics Tracks Molecular Changes in Raw and Processed Foods and Beverages

biochemistry more details view paper
  • Downloaded 689 times
  • Download rankings, all-time:
    • Site-wide: 16,819 out of 78,246
    • In biochemistry: 381 out of 2,462
  • Year to date:
    • Site-wide: 37,429 out of 78,246
  • Since beginning of last month:
    • Site-wide: 28,082 out of 78,246

Comprehensive mass spectrometry-guided plant specialized metabolite phenotyping reveals metabolic diversity in the cosmopolitan plant family Rhamnaceae

plant biology more details view paper
  • Downloaded 595 times
  • Download rankings, all-time:
    • Site-wide: 20,817 out of 78,246
    • In plant biology: 510 out of 2,363
  • Year to date:
    • Site-wide: 41,704 out of 78,246
  • Since beginning of last month:
    • Site-wide: 51,408 out of 78,246

Repository-scale Co- and Re-analysis of Tandem Mass Spectrometry Data

bioinformatics more details view paper
  • Downloaded 543 times
  • Download rankings, all-time:
    • Site-wide: 23,526 out of 78,246
    • In bioinformatics: 3,305 out of 7,553
  • Year to date:
    • Site-wide: 7,963 out of 78,246
  • Since beginning of last month:
    • Site-wide: 14,955 out of 78,246

Extracellular matrix components are required to protect Bacillus subtilis colonies from T6SS-dependent Pseudomonas invasion and modulate co-colonization of plant

microbiology more details view paper
  • Downloaded 493 times
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    • Site-wide: 26,588 out of 78,246
    • In microbiology: 1,572 out of 6,496
  • Year to date:
    • Site-wide: 46,230 out of 78,246
  • Since beginning of last month:
    • Site-wide: 43,761 out of 78,246

Did a plant-herbivore arms race drive chemical diversity in Euphorbia?

evolutionary biology more details view paper
  • Downloaded 477 times
  • Download rankings, all-time:
    • Site-wide: 27,670 out of 78,246
    • In evolutionary biology: 1,955 out of 4,974
  • Year to date:
    • Site-wide: 42,499 out of 78,246
  • Since beginning of last month:
    • Site-wide: 35,754 out of 78,246

ZODIAC: database-independent molecular formula annotation using Gibbs sampling reveals unknown small molecules

bioinformatics more details view paper
  • Downloaded 439 times
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    • Site-wide: 30,504 out of 78,246
    • In bioinformatics: 3,975 out of 7,553
  • Year to date:
    • Site-wide: 8,991 out of 78,246
  • Since beginning of last month:
    • Site-wide: 8,708 out of 78,246

Native Electrospray-based Metabolomics Enables the Detection of Metal-binding Compounds

biochemistry more details view paper
  • Downloaded 438 times
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    • Site-wide: 30,618 out of 78,246
    • In biochemistry: 793 out of 2,462
  • Year to date:
    • Site-wide: 15,494 out of 78,246
  • Since beginning of last month:
    • Site-wide: 29,279 out of 78,246

Fungal-bacterial interaction selects for quorum sensing mutants and a metabolic shift towards the production of natural antifungal compounds

microbiology more details view paper
  • Downloaded 412 times
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    • Site-wide: 32,801 out of 78,246
    • In microbiology: 2,064 out of 6,496
  • Year to date:
    • Site-wide: 16,515 out of 78,246
  • Since beginning of last month:
    • Site-wide: 11,356 out of 78,246

Revisiting microbe-metabolite interactions: doing better than random

bioinformatics more details view paper
  • Downloaded 393 times
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    • Site-wide: 34,466 out of 78,246
    • In bioinformatics: 4,331 out of 7,553
  • Year to date:
    • Site-wide: 10,061 out of 78,246
  • Since beginning of last month:
    • Site-wide: 11,144 out of 78,246

Preprint: Environmentally-Friendly Workflow Based on Supercritical Fluid Chromatography and Tandem Mass Spectrometry Molecular Networking For the Discovery of Potent Anti-Viral Leads From Plants

pharmacology and toxicology more details view paper
  • Downloaded 382 times
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    • Site-wide: 35,588 out of 78,246
    • In pharmacology and toxicology: 190 out of 685
  • Year to date:
    • Site-wide: 54,566 out of 78,246
  • Since beginning of last month:
    • Site-wide: 61,020 out of 78,246

Laboratory evolution of Escherichia coli enables life based on fluorinated amino acids

synthetic biology more details view paper
  • Downloaded 365 times
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    • Site-wide: 37,326 out of 78,246
    • In synthetic biology: 540 out of 744
  • Year to date:
    • Site-wide: 38,970 out of 78,246
  • Since beginning of last month:
    • Site-wide: 43,150 out of 78,246

The Molecular and Microbial Microenvironments in Chronically Diseased Lungs

microbiology more details view paper
  • Downloaded 329 times
  • Download rankings, all-time:
    • Site-wide: 41,076 out of 78,246
    • In microbiology: 2,734 out of 6,496
  • Year to date:
    • Site-wide: 64,108 out of 78,246
  • Since beginning of last month:
    • Site-wide: 62,839 out of 78,246

Metabolome-informed microbiome analysis refines metadata classifications and reveals unexpected medication transfer in captive cheetahs

systems biology more details view paper
  • Downloaded 253 times
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    • Site-wide: 51,048 out of 78,246
    • In systems biology: 1,535 out of 2,109
  • Year to date:
    • Site-wide: 24,983 out of 78,246
  • Since beginning of last month:
    • Site-wide: 22,417 out of 78,246

Protocol for Community-created Public MS/MS Reference Library Within the GNPS Infrastructure

bioinformatics more details view paper
  • Downloaded 224 times
  • Download rankings, all-time:
    • Site-wide: 55,417 out of 78,246
    • In bioinformatics: 5,972 out of 7,553
  • Year to date:
    • Site-wide: 21,263 out of 78,246
  • Since beginning of last month:
    • Site-wide: 28,417 out of 78,246

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