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Author: Emma C Thomson

Rankings

  • All-time downloads: 114,973 (rank: 1,629 )
  • Categories:
    • allergy and immunology: 2,827 (rank: 908 (tie) )
    • bioinformatics: 2,565 (rank: 8,082 (tie) )
    • epidemiology: 23,940 (rank: 1,022 )
    • genetic and genomic medicine: 103 (rank: 19,705 (tie) )
    • genomics: 6,096 (rank: 5,063 (tie) )
    • infectious diseases: 54,985 (rank: 1,389 )
    • microbiology: 20,106 (rank: 1,173 )

Downloads per author, site-wide

Preprints

Reduced neutralisation of the Delta (B.1.617.2) SARS-CoV-2 variant of concern following vaccination

infectious diseases more details view paper
  • Downloaded 15,505 times
  • Download rankings, all-time:
    • Site-wide: 768
    • In infectious diseases: 270
  • Year to date:
    • Site-wide: 7,003
  • Since beginning of last month:
    • Site-wide: 14,144

The circulating SARS-CoV-2 spike variant N439K maintains fitness while evading antibody-mediated immunity

microbiology more details view paper
  • Downloaded 15,235 times
  • Download rankings, all-time:
    • Site-wide: 786
    • In microbiology: 84
  • Year to date:
    • Site-wide: 12,574
  • Since beginning of last month:
    • Site-wide: 8,232

Sharing a household with children and risk of COVID-19: a study of over 300,000 adults living in healthcare worker households in Scotland

epidemiology more details view paper
  • Downloaded 14,219 times
  • Download rankings, all-time:
    • Site-wide: 859
    • In epidemiology: 129
  • Year to date:
    • Site-wide: 4,357
  • Since beginning of last month:
    • Site-wide: 13,441

The hyper-transmissible SARS-CoV-2 Omicron variant exhibits significant antigenic change, vaccine escape and a switch in cell entry mechanism

infectious diseases more details view paper
  • Downloaded 13,492 times
  • Download rankings, all-time:
    • Site-wide: 919
    • In infectious diseases: 312
  • Year to date:
    • Site-wide: 99
  • Since beginning of last month:
    • Site-wide: 2,617

Genomic epidemiology of SARS-CoV-2 spread in Scotland highlights the role of European travel in COVID-19 emergence

infectious diseases more details view paper
  • Downloaded 9,062 times
  • Download rankings, all-time:
    • Site-wide: 1,531
    • In infectious diseases: 459
  • Year to date:
    • Site-wide: 49,597
  • Since beginning of last month:
    • Site-wide: 51,962

Adeno-associated virus 2 infection in children with non-A-E hepatitis

infectious diseases more details view paper
  • Downloaded 8,337 times
  • Download rankings, all-time:
    • Site-wide: 1,704
    • In infectious diseases: 614
  • Year to date:
    • Site-wide: 171
  • Since beginning of last month:
    • Site-wide: 536

Efficacy of the NVX-CoV2373 Covid-19 Vaccine Against the B.1.1.7 Variant

infectious diseases more details view paper
  • Downloaded 7,251 times
  • Download rankings, all-time:
    • Site-wide: 2,056
    • In infectious diseases: 579
  • Year to date:
    • Site-wide: 4,729
  • Since beginning of last month:
    • Site-wide: 21,002

Evaluating the effects of SARS-CoV-2 Spike mutation D614G on transmissibility and pathogenicity

epidemiology more details view paper
  • Downloaded 6,103 times
  • Download rankings, all-time:
    • Site-wide: 2,616
    • In epidemiology: 298
  • Year to date:
    • Site-wide: 67,141
  • Since beginning of last month:
    • Site-wide: 109,411

Within-host genomics of SARS-CoV-2

genomics more details view paper
  • Downloaded 5,704 times
  • Download rankings, all-time:
    • Site-wide: 2,849
    • In genomics: 231
  • Year to date:
    • Site-wide: 26,271
  • Since beginning of last month:
    • Site-wide: 30,370

Children develop robust and sustained cross-reactive spike-specific immune responses following SARS-CoV-2 infection

allergy and immunology more details view paper
  • Downloaded 2,928 times
  • Download rankings, all-time:
    • Site-wide: 7,350
    • In allergy and immunology: 49
  • Year to date:
    • Site-wide: 4,796
  • Since beginning of last month:
    • Site-wide: 21,897

Inconsistent directions of change in case severity across successive SARS-CoV-2 variant waves suggests an unpredictable future

epidemiology more details view paper
  • Downloaded 2,440 times
  • Download rankings, all-time:
    • Site-wide: 9,634
    • In epidemiology: 894
  • Year to date:
    • Site-wide: 865
  • Since beginning of last month:
    • Site-wide: 28,832

Distinct antigenic properties of the SARS-CoV-2 Omicron lineages BA.4 and BA.5

microbiology more details view paper
  • Downloaded 2,181 times
  • Download rankings, all-time:
    • Site-wide: 11,427
    • In microbiology: 777
  • Year to date:
    • Site-wide: 1,031
  • Since beginning of last month:
    • Site-wide: 17,709

In vitro evolution of Remdesivir resistance reveals genome plasticity of SARS-CoV-2

microbiology more details view paper
  • Downloaded 1,846 times
  • Download rankings, all-time:
    • Site-wide: 14,707
    • In microbiology: 836
  • Year to date:
    • Site-wide: 19,818
  • Since beginning of last month:
    • Site-wide: 54,108

Rapid feedback on hospital onset SARS-CoV-2 infections combining epidemiological and sequencing data

infectious diseases more details view paper
  • Downloaded 1,503 times
  • Download rankings, all-time:
    • Site-wide: 20,252
    • In infectious diseases: 2,352
  • Year to date:
    • Site-wide: 7,630
  • Since beginning of last month:
    • Site-wide: 25,940

periscope: Sub-Genomic RNA Identification in SARS-CoV-2 Genomic Sequencing Data

bioinformatics more details view paper
  • Downloaded 1,443 times
  • Download rankings, all-time:
    • Site-wide: 21,612
    • In bioinformatics: 2,333
  • Year to date:
    • Site-wide: 59,303
  • Since beginning of last month:
    • Site-wide: 58,240

GLUE: A flexible software system for virus sequence data

bioinformatics more details view paper
  • Downloaded 1,187 times
  • Download rankings, all-time:
    • Site-wide: 29,481
    • In bioinformatics: 3,066
  • Year to date:
    • Site-wide: 135,459
  • Since beginning of last month:
    • Site-wide: 104,855

Epidemic waves of COVID-19 in Scotland: a genomic perspective on the impact of the introduction and relaxation of lockdown on SARS-CoV-2

epidemiology more details view paper
  • Downloaded 1,042 times
  • Download rankings, all-time:
    • Site-wide: 36,032
    • In epidemiology: 1,940
  • Year to date:
    • Site-wide: 51,183
  • Since beginning of last month:
    • Site-wide: 116,233

Remdesivir induced viral RNA and subgenomic RNA suppression, and evolution of viral variants in SARS-CoV-2 infected patients.

infectious diseases more details view paper
  • Downloaded 850 times
  • Download rankings, all-time:
    • Site-wide: 49,183
    • In infectious diseases: 3,665
  • Year to date:
    • Site-wide: 68,650
  • Since beginning of last month:
    • Site-wide: 85,125

COVID-19: A need for new rather than repurposed antiviral drugs.

microbiology more details view paper
  • Downloaded 831 times
  • Download rankings, all-time:
    • Site-wide: 50,999
    • In microbiology: 3,021
  • Year to date:
    • Site-wide: 78,017
  • Since beginning of last month:
    • Site-wide: 117,571

The SARS-CoV-2 Alpha variant is associated with increased clinical severity of disease in Scotland: a genomics-based prospective cohort analysis

epidemiology more details view paper
  • Downloaded 818 times
  • Download rankings, all-time:
    • Site-wide: 52,179
    • In epidemiology: 2,849
  • Year to date:
    • Site-wide: 21,094
  • Since beginning of last month:
    • Site-wide: 33,429

GENOMIC INVESTIGATIONS OF ACUTE HEPATITIS OF UNKNOWN AETIOLOGY IN CHILDREN

infectious diseases more details view paper
  • Downloaded 673 times
  • Download rankings, all-time:
    • Site-wide: 69,102
    • In infectious diseases: 6,127
  • Year to date:
    • Site-wide: 6,579
  • Since beginning of last month:
    • Site-wide: 6,565

SARS-CoV-2 evolution and patient immunological history shape the breadth and potency of antibody-mediated immunity

microbiology more details view paper
  • Downloaded 574 times
  • Download rankings, all-time:
    • Site-wide: 84,930
    • In microbiology: 5,553
  • Year to date:
    • Site-wide: 8,560
  • Since beginning of last month:
    • Site-wide: 179,973

Interferon lambda 4 impacts broadly on hepatitis C virus diversity.

genomics more details view paper
  • Downloaded 497 times
  • Download rankings, all-time:
    • Site-wide: 100,886
    • In genomics: 6,011
  • Year to date:
    • Site-wide: 178,876
  • Since beginning of last month:
    • Site-wide: 79,166

SARS-CoV-2 lineage B.1.1.7 is associated with greater disease severity among hospitalised women but not men

infectious diseases more details view paper
  • Downloaded 453 times
  • Download rankings, all-time:
    • Site-wide: 111,231
    • In infectious diseases: 5,660
  • Year to date:
    • Site-wide: 144,386
  • Since beginning of last month:
    • Site-wide: 138,093

Genetic epidemiology of SARS-CoV-2 transmission in renal dialysis units - a high risk community-hospital interface

infectious diseases more details view paper
  • Downloaded 385 times
  • Download rankings, all-time:
    • Site-wide: 129,341
    • In infectious diseases: 6,141
  • Year to date:
    • Site-wide: 57,274
  • Since beginning of last month:
    • Site-wide: 175,388

Real World SOF/VEL/VOX Retreatment Outcomes and Viral Resistance Analysis for HCV Patients with Prior Failure to DAAs

infectious diseases more details view paper
  • Downloaded 288 times
  • Download rankings, all-time:
    • Site-wide: 158,171
    • In infectious diseases: 6,925
  • Year to date:
    • Site-wide: 190,087
  • Since beginning of last month:
    • Site-wide: 157,272

How acceptable is rapid whole genome sequencing for infectious disease management in hospitals? Perspectives of those involved in managing nosocomial SARS-CoV-2

genetic and genomic medicine more details view paper
  • Downloaded 126 times
  • Download rankings, all-time:
    • Site-wide: 196,868
    • In genetic and genomic medicine: 1,458
  • Year to date:
    • Site-wide: 76,662
  • Since beginning of last month:
    • Site-wide: 66,272

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