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Author: Maxwell W Libbrecht

Rankings

  • All-time downloads: 9,802 (rank: 24,967 (tie) )
  • Categories:
    • bioinformatics: 5,393 (rank: 2,539 (tie) )
    • epidemiology: 228 (rank: 29,476 (tie) )
    • genomics: 4,181 (rank: 6,556 )

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Preprints

A unified encyclopedia of human functional DNA elements through fully automated annotation of 164 human cell types

genomics more details view paper
  • Downloaded 2,562 times
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    • Site-wide: 6,549
    • In genomics: 678
  • Year to date:
    • Site-wide: 99,385
  • Since beginning of last month:
    • Site-wide: 105,729

Joint annotation of chromatin state and chromatin conformation reveals relationships among domain types and identifies domains of cell type-specific expression

genomics more details view paper
  • Downloaded 1,478 times
  • Download rankings, all-time:
    • Site-wide: 14,713
    • In genomics: 1,466
  • Year to date:
    • Site-wide: 104,549
  • Since beginning of last month:
    • Site-wide: 134,435

PREDICTD: PaRallel Epigenomics Data Imputation With Cloud-based Tensor Decomposition

bioinformatics more details view paper
  • Downloaded 1,005 times
  • Download rankings, all-time:
    • Site-wide: 26,179
    • In bioinformatics: 2,943
  • Year to date:
    • Site-wide: 139,964
  • Since beginning of last month:
    • Site-wide: 151,845

Choosing panels of genomics assays using submodular optimization

bioinformatics more details view paper
  • Downloaded 823 times
  • Download rankings, all-time:
    • Site-wide: 34,785
    • In bioinformatics: 3,782
  • Year to date:
    • Site-wide: 113,461
  • Since beginning of last month:
    • Site-wide: 135,336

VSS: Variance-stabilized signals for sequencing-based genomic signals

bioinformatics more details view paper
  • Downloaded 618 times
  • Download rankings, all-time:
    • Site-wide: 51,344
    • In bioinformatics: 5,212
  • Year to date:
    • Site-wide: 51,160
  • Since beginning of last month:
    • Site-wide: 46,040

Segway 2.0: Gaussian mixture models and minibatch training

bioinformatics more details view paper
  • Downloaded 598 times
  • Download rankings, all-time:
    • Site-wide: 53,533
    • In bioinformatics: 5,401
  • Year to date:
    • Site-wide: 132,801
  • Since beginning of last month:
    • Site-wide: 147,117

An interpretable classification method for predicting drug resistance in M. tuberculosis

bioinformatics more details view paper
  • Downloaded 588 times
  • Download rankings, all-time:
    • Site-wide: 54,715
    • In bioinformatics: 5,490
  • Year to date:
    • Site-wide: 27,994
  • Since beginning of last month:
    • Site-wide: 47,438

Continuous chromatin state feature annotation of the human epigenome

bioinformatics more details view paper
  • Downloaded 571 times
  • Download rankings, all-time:
    • Site-wide: 56,744
    • In bioinformatics: 5,661
  • Year to date:
    • Site-wide: 97,778
  • Since beginning of last month:
    • Site-wide: 86,907

Semi-supervised segmentation and genome annotation

bioinformatics more details view paper
  • Downloaded 509 times
  • Download rankings, all-time:
    • Site-wide: 64,936
    • In bioinformatics: 6,288
  • Year to date:
    • Site-wide: 55,292
  • Since beginning of last month:
    • Site-wide: 75,818

Geographic heterogeneity impacts drug resistance predictions in Mycobacterium tuberculosis

bioinformatics more details view paper
  • Downloaded 291 times
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    • Site-wide: 108,192
    • In bioinformatics: 9,090
  • Year to date:
    • Site-wide: 52,059
  • Since beginning of last month:
    • Site-wide: 64,958

SplitStrains, a tool to identify and separate mixed Mycobacterium tuberculosis infections from WGS data

epidemiology more details view paper
  • Downloaded 228 times
  • Download rankings, all-time:
    • Site-wide: 124,797
    • In epidemiology: 5,267
  • Year to date:
    • Site-wide: 36,519
  • Since beginning of last month:
    • Site-wide: 35,750

SigTools: Exploratory Visualization for Genomic Signals

bioinformatics more details view paper
  • Downloaded 200 times
  • Download rankings, all-time:
    • Site-wide: 131,780
    • In bioinformatics: 10,437
  • Year to date:
    • Site-wide: 42,864
  • Since beginning of last month:
    • Site-wide: 27,282

Latent representation of the human pan-celltype epigenome through a deep recurrent neural network

bioinformatics more details view paper
  • Downloaded 190 times
  • Download rankings, all-time:
    • Site-wide: 134,250
    • In bioinformatics: 10,578
  • Year to date:
    • Site-wide: 45,333
  • Since beginning of last month:
    • Site-wide: 116,654

Hi-C-LSTM: Learning representations of chromatin contacts using a recurrent neural network identifies genomic drivers of conformation

genomics more details view paper
  • Downloaded 141 times
  • Download rankings, all-time:
    • Site-wide: 145,601
    • In genomics: 7,490
  • Year to date:
    • Site-wide: 62,807
  • Since beginning of last month:
    • Site-wide: 8,820

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