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Author: Nancy R Zhang

  • Most recently observed institution: University of Pennsylvania

Rankings

  • All-time downloads: 26,327 (rank: 8,461 (tie) )
  • Categories:
    • bioinformatics: 14,598 (rank: 556 )
    • genetics: 4,913 (rank: 4,128 (tie) )
    • genomics: 6,816 (rank: 3,600 (tie) )

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Preprints

SAVER: Gene expression recovery for UMI-based single cell RNA sequencing

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  • Download rankings, all-time:
    • Site-wide: 2,832
    • In genomics: 269
  • Year to date:
    • Site-wide: 43,006
  • Since beginning of last month:
    • Site-wide: 30,858

Data Denoising with transfer learning in single-cell transcriptomics

bioinformatics more details view paper
  • Downloaded 3,387 times
  • Download rankings, all-time:
    • Site-wide: 4,628
    • In bioinformatics: 431
  • Year to date:
    • Site-wide: 20,839
  • Since beginning of last month:
    • Site-wide: 18,432

Gene Expression Distribution Deconvolution in Single Cell RNA Sequencing

genetics more details view paper
  • Downloaded 2,053 times
  • Download rankings, all-time:
    • Site-wide: 9,597
    • In genetics: 394
  • Year to date:
    • Site-wide: 119,205
  • Since beginning of last month:
    • Site-wide: 139,088

Bulk Tissue Cell Type Deconvolution with Multi-Subject Single-Cell Expression Reference

bioinformatics more details view paper
  • Downloaded 1,947 times
  • Download rankings, all-time:
    • Site-wide: 10,406
    • In bioinformatics: 1,182
  • Year to date:
    • Site-wide: 119,479
  • Since beginning of last month:
    • Site-wide: 132,960

Genetic Heterogeneity Profiling by Single Cell RNA Sequencing

bioinformatics more details view paper
  • Downloaded 1,595 times
  • Download rankings, all-time:
    • Site-wide: 13,981
    • In bioinformatics: 1,552
  • Year to date:
    • Site-wide: 77,177
  • Since beginning of last month:
    • Site-wide: 66,275

Accounting For Technical Noise In Single-Cell RNA Sequencing Analysis

bioinformatics more details view paper
  • Downloaded 1,573 times
  • Download rankings, all-time:
    • Site-wide: 14,309
    • In bioinformatics: 1,598
  • Year to date:
    • Site-wide: 129,903
  • Since beginning of last month:
    • Site-wide: 135,179

A Mendelian randomization study of the role of lipoprotein subfractions in coronary artery disease

genetics more details view paper
  • Downloaded 1,539 times
  • Download rankings, all-time:
    • Site-wide: 14,829
    • In genetics: 653
  • Year to date:
    • Site-wide: 19,513
  • Since beginning of last month:
    • Site-wide: 57,557

CODEX2: full-spectrum copy number variation detection by high-throughput DNA sequencing

bioinformatics more details view paper
  • Downloaded 1,524 times
  • Download rankings, all-time:
    • Site-wide: 15,088
    • In bioinformatics: 1,704
  • Year to date:
    • Site-wide: 153,611
  • Since beginning of last month:
    • Site-wide: 154,514

Causal Inference for Heritable Phenotypic Risk Factors Using Heterogeneous Genetic Instruments

genetics more details view paper
  • Downloaded 1,321 times
  • Download rankings, all-time:
    • Site-wide: 18,797
    • In genetics: 838
  • Year to date:
    • Site-wide: 10,239
  • Since beginning of last month:
    • Site-wide: 11,582

Integrative pipeline for profiling DNA copy number and inferring tumor phylogeny

bioinformatics more details view paper
  • Downloaded 1,234 times
  • Download rankings, all-time:
    • Site-wide: 20,811
    • In bioinformatics: 2,347
  • Year to date:
    • Site-wide: 144,717
  • Since beginning of last month:
    • Site-wide: 157,781

Modeling allele-specific gene expression by single-cell RNA sequencing

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  • Downloaded 1,231 times
  • Download rankings, all-time:
    • Site-wide: 20,881
    • In genomics: 1,942
  • Year to date:
    • Site-wide: 163,107
  • Since beginning of last month:
    • Site-wide: 158,912

Surface protein imputation from single cell transcriptomes by deep neural networks

bioinformatics more details view paper
  • Downloaded 1,161 times
  • Download rankings, all-time:
    • Site-wide: 22,830
    • In bioinformatics: 2,569
  • Year to date:
    • Site-wide: 119,416
  • Since beginning of last month:
    • Site-wide: 146,946

Alleloscope: Integrative single cell analysis of allele-specific copy number alterations and chromatin accessibility in cancer

bioinformatics more details view paper
  • Downloaded 1,001 times
  • Download rankings, all-time:
    • Site-wide: 28,564
    • In bioinformatics: 3,173
  • Year to date:
    • Site-wide: 15,228
  • Since beginning of last month:
    • Site-wide: 25,870

SVEngine: an efficient and versatile simulator of genome structural variations with features of cancer clonal evolution

bioinformatics more details view paper
  • Downloaded 781 times
  • Download rankings, all-time:
    • Site-wide: 40,972
    • In bioinformatics: 4,312
  • Year to date:
    • Site-wide: 129,095
  • Since beginning of last month:
    • Site-wide: 151,246

Dimension reduction and denoising of single-cell RNA sequencing data in the presence of observed confounding variables

genomics more details view paper
  • Downloaded 770 times
  • Download rankings, all-time:
    • Site-wide: 41,873
    • In genomics: 3,325
  • Year to date:
    • Site-wide: 19,463
  • Since beginning of last month:
    • Site-wide: 46,594

Nonparametric Interrogation of Transcriptional Regulation in Single-Cell RNA and Chromatin Accessibility Multiomic Data

bioinformatics more details view paper
  • Downloaded 395 times
  • Download rankings, all-time:
    • Site-wide: 93,679
    • In bioinformatics: 8,174
  • Year to date:
    • Site-wide: 23,105
  • Since beginning of last month:
    • Site-wide: 3,101

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