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Author: Caleb A. Lareau

Rankings

  • All-time downloads: 36,949 (rank: 1,032 out of 380,749)
  • Categories:
    • bioinformatics: 6,891 (rank: 1,021 (tie) out of 32,582)
    • genetics: 9,408 (rank: 1,423 out of 35,172)
    • genomics: 14,895 (rank: 740 out of 40,604)
    • molecular biology: 5,755 (rank: 287 out of 19,718)

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Preprints

Droplet-based combinatorial indexing for massive scale single-cell epigenomics

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Assessment of computational methods for the analysis of single-cell ATAC-seq data

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    • In bioinformatics: 145 out of 8,397
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    • Site-wide: 3,519 out of 88,806

Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types

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“Unexpected mutations after CRISPR-Cas9 editing in vivo” are most likely pre-existing sequence variants and not nuclease-induced mutations

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Chromatin potential identified by shared single cell profiling of RNA and chromatin

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STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of omics data

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Interrogation of human hematopoiesis at single-cell and single-variant resolution

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Inference and effects of barcode multiplets in droplet-based single-cell assays

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    • Site-wide: 17,401 out of 88,806

CRISPR adenine and cytosine base editors with reduced RNA off-target activities

molecular biology more details view paper
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    • In molecular biology: 140 out of 2,998
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    • Site-wide: 13,660 out of 88,806

Trans-ethnic and ancestry-specific blood-cell genetics in 746,667 individuals from 5 global populations

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    • In genetics: 442 out of 4,602
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    • Site-wide: 807 out of 88,806
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    • Site-wide: 4,704 out of 88,806

hichipper: A preprocessing pipeline for assessing library quality and DNA loops from HiChIP data

bioinformatics more details view paper
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    • Site-wide: 6,234 out of 88,806
    • In bioinformatics: 1,104 out of 8,397
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    • Site-wide: 18,687 out of 88,806
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    • Site-wide: 22,678 out of 88,806

Genetic predisposition to myeloproliferative neoplasms implicates hematopoietic stem cell biology

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    • In genetics: 941 out of 4,602
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    • Site-wide: 5,125 out of 88,806

diffloop: a computational framework for identifying and analyzing differential DNA loops from sequencing data

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    • Site-wide: 15,932 out of 88,806
    • In bioinformatics: 2,453 out of 8,397
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    • Site-wide: 69,588 out of 88,806
  • Since beginning of last month:
    • Site-wide: 38,573 out of 88,806

Gene-centric functional dissection of human genetic variation uncovers regulators of hematopoiesis

genomics more details view paper
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    • Site-wide: 31,900 out of 88,806
    • In genomics: 3,195 out of 5,668
  • Year to date:
    • Site-wide: 69,750 out of 88,806
  • Since beginning of last month:
    • Site-wide: 57,855 out of 88,806

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