Author: Barbara Hutter

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Preprints

A Comprehensive Assessment of Somatic Mutation Calling in Cancer Genomes

• Downloaded 2,400 times
• Download rankings, all-time:
  • Site-wide: 5,349
  • In genomics: 628
• Year to date:
  • Site-wide: 84,570
• Since beginning of last month:
  • Site-wide: 60,389

Large-Scale Uniform Analysis of Cancer Whole Genomes in Multiple Computing Environments

• Downloaded 2,307 times
• Download rankings, all-time:
  • Site-wide: 5,674
  • In genomics: 662
• Year to date:
  • Site-wide: 27,585
• Since beginning of last month:
  • Site-wide: 37,402

A comprehensive multicenter comparison of whole genome sequencing pipelines using a uniform tumor-normal sample pair

• Downloaded 2,146 times
• Download rankings, all-time:
  • Site-wide: 6,284
  • In genomics: 722
• Year to date:
  • Site-wide: 89,792
• Since beginning of last month:
  • Site-wide: 93,905

TelomereHunter: telomere content estimation and characterization from whole genome sequencing data

• Downloaded 1,869 times
• Download rankings, all-time:
  • Site-wide: 7,691
  • In bioinformatics: 946
• Year to date:
  • Site-wide: 49,704
• Since beginning of last month:
  • Site-wide: 66,264

Genomic footprints of activated telomere maintenance mechanisms in cancer

• Downloaded 1,455 times
• Download rankings, all-time:
  • Site-wide: 11,182
  • In genomics: 1,248
• Year to date:
  • Site-wide: 82,546
• Since beginning of last month:
  • Site-wide: 60,289

Combining transcription factor binding affinities with open-chromatin data for accurate gene expression prediction

• Downloaded 1,107 times
• Download rankings, all-time:
  • Site-wide: 16,921
  • In bioinformatics: 2,062
• Year to date:
  • Site-wide: 115,520
• Since beginning of last month:
  • Site-wide: 106,159

Framework For Quality Assessment Of Whole Genome, Cancer Sequences

• Downloaded 1,067 times
• Download rankings, all-time:
  • Site-wide: 17,847
  • In genomics: 1,847
• Year to date:
  • Site-wide: None
• Since beginning of last month:
  • Site-wide: None

Integrative analysis of single cell expression data reveals distinct regulatory states in bidirectional promoters

• Downloaded 533 times
• Download rankings, all-time:
  • Site-wide: 46,060
  • In genomics: 3,725
• Year to date:
  • Site-wide: 116,575
• Since beginning of last month:
  • Site-wide: 82,892