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Author: Andre Franke

Rankings

  • All-time downloads: 152,412 (rank: 1,025 )
  • Categories:
    • allergy and immunology: 10,216 (rank: 218 (tie) )
    • bioinformatics: 4,372 (rank: 4,135 )
    • evolutionary biology: 1,758 (rank: 5,170 (tie) )
    • gastroenterology: 1,934 (rank: 137 )
    • genetic and genomic medicine: 8,440 (rank: 252 )
    • genetics: 17,537 (rank: 971 )
    • genomics: 4,451 (rank: 7,232 (tie) )
    • immunology: 5,156 (rank: 3,137 )
    • infectious diseases: 88,676 (rank: 681 (tie) )
    • microbiology: 2,328 (rank: 9,638 (tie) )
    • molecular biology: 478 (rank: 21,914 (tie) )
    • neurology: 2,604 (rank: 720 (tie) )
    • neuroscience: 392 (rank: 78,587 (tie) )
    • plant biology: 614 (rank: 12,236 (tie) )

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Preprints

The ABO blood group locus and a chromosome 3 gene cluster associate with SARS-CoV-2 respiratory failure in an Italian-Spanish genome-wide association analysis

infectious diseases more details view paper
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    • Site-wide: 98
    • In infectious diseases: 36
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    • Site-wide: 3,461

Pre-existing T cell memory as a risk factor for severe 1 COVID-19 in the elderly

allergy and immunology more details view paper
  • Downloaded 10,368 times
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    • Site-wide: 1,299
    • In allergy and immunology: 10
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A Saturated Map of Common Genetic Variants Associated with Human Height from 5.4 Million Individuals of Diverse Ancestries

genetics more details view paper
  • Downloaded 6,160 times
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    • Site-wide: 2,575
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Association mapping of inflammatory bowel disease loci to single variant resolution

genetics more details view paper
  • Downloaded 3,786 times
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    • Site-wide: 5,054
    • In genetics: 157
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Longitudinal high-throughput TCR repertoire profiling reveals the dynamics of T cell memory formation after mild COVID-19 infection

immunology more details view paper
  • Downloaded 3,474 times
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    • Site-wide: 5,740
    • In immunology: 225
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Genetic correlations among psychiatric and immune-related phenotypes based on genome-wide association data.

bioinformatics more details view paper
  • Downloaded 3,333 times
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    • Site-wide: 6,114
    • In bioinformatics: 545
  • Year to date:
    • Site-wide: 64,017
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Large-scale association analyses identify host factors influencing human gut microbiome composition

genetics more details view paper
  • Downloaded 2,954 times
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    • Site-wide: 7,254
    • In genetics: 263
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Sequencing of over 100,000 individuals identifies multiple genes and rare variants associated with Crohns disease susceptibility

genetic and genomic medicine more details view paper
  • Downloaded 2,357 times
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    • Site-wide: 10,160
    • In genetic and genomic medicine: 62
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Longitudinal multi-omics analysis identifies responses of megakaryocytes, erythroid cells and plasmablasts as hallmarks of severe COVID-19 trajectories

infectious diseases more details view paper
  • Downloaded 2,356 times
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    • Site-wide: 10,162
    • In infectious diseases: 1,595
  • Year to date:
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Common and rare variant association analyses in Amyotrophic Lateral Sclerosis identify 15 risk loci with distinct genetic architectures and neuron-specific biology

neurology more details view paper
  • Downloaded 2,214 times
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    • Site-wide: 11,172
    • In neurology: 33
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    • Site-wide: 53,284

New susceptibility loci for severe COVID-19 by detailed GWAS analysis in European populations

genetic and genomic medicine more details view paper
  • Downloaded 2,152 times
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    • Site-wide: 11,673
    • In genetic and genomic medicine: 68
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Neolithic genomes reveal a distinct ancient HLA allele pool and population transformation in Europe

evolutionary biology more details view paper
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    • Site-wide: 15,190
    • In evolutionary biology: 419
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Age-dependent impact of the major common genetic risk factor for COVID-19 on severity and mortality

genetic and genomic medicine more details view paper
  • Downloaded 1,662 times
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    • Site-wide: 17,277
    • In genetic and genomic medicine: 102
  • Year to date:
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    • Site-wide: 37,884

Insights into the genetic epidemiology of Crohn's and rare diseases in the Ashkenazi Jewish population

genetics more details view paper
  • Downloaded 1,623 times
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    • Site-wide: 17,959
    • In genetics: 713
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    • Site-wide: 60,771

A multi-layer functional genomic analysis to understand noncoding genetic variation in lipids

genomics more details view paper
  • Downloaded 1,369 times
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    • Site-wide: 23,527
    • In genomics: 2,132
  • Year to date:
    • Site-wide: 9,864
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    • Site-wide: 34,279

ABO histo-blood groups influence gut microbiome, with causal relationship between Bacteroides and inflammatory bowel disease

gastroenterology more details view paper
  • Downloaded 1,213 times
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    • Site-wide: 28,490
    • In gastroenterology: 31
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A genome-wide genetic pleiotropy approach identified shared loci between multiple system atrophy and inflammatory bowel disease

genetics more details view paper
  • Downloaded 1,112 times
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    • Site-wide: 32,657
    • In genetics: 1,313
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Characterization of SARS-CoV-2 public CD4+ αβ T cell clonotypes through reverse epitope discovery

immunology more details view paper
  • Downloaded 1,038 times
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    • Site-wide: 36,237
    • In immunology: 1,360
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Comparative analysis of amplicon and metagenomic sequencing methods reveals key features in the evolution of animal metaorganisms

microbiology more details view paper
  • Downloaded 916 times
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    • Site-wide: 43,885
    • In microbiology: 2,572
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    • Site-wide: 77,756

GWAS defines pathogenic signaling pathways and prioritizes drug targets for IgA nephropathy

genetic and genomic medicine more details view paper
  • Downloaded 886 times
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    • Site-wide: 46,211
    • In genetic and genomic medicine: 348
  • Year to date:
    • Site-wide: 8,150
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    • Site-wide: 5,882

Arrhythmic gut microbiome signatures for risk profiling of Type-2 Diabetes

microbiology more details view paper
  • Downloaded 884 times
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    • Site-wide: 46,334
    • In microbiology: 2,671
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    • Site-wide: 136,970
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Comprehensive analysis of antiviral adaptive immunity formation and reactivation down to single-cell level

immunology more details view paper
  • Downloaded 828 times
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    • Site-wide: 51,243
    • In immunology: 1,703
  • Year to date:
    • Site-wide: 120,962
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GWAS of stool frequency reveals genes, pathways, and cell types relevant to human gastrointestinal motility and irritable bowel syndrome

gastroenterology more details view paper
  • Downloaded 816 times
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    • Site-wide: 52,372
    • In gastroenterology: 53
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    • Site-wide: 82,878
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    • Site-wide: 68,994

Artificial intelligence enables comprehensive genome interpretation and nomination of candidate diagnoses for rare genetic diseases

genetic and genomic medicine more details view paper
  • Downloaded 809 times
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    • Site-wide: 53,012
    • In genetic and genomic medicine: 321
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Integrating Culture-based Antibiotic Resistance Profiles with Whole-genome Sequencing Data for 11,087 Clinical Isolates

genomics more details view paper
  • Downloaded 795 times
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    • Site-wide: 54,424
    • In genomics: 3,864
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    • Site-wide: 161,138
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    • Site-wide: 86,721

Key features of the genetic architecture and evolution of host-microbe interactions revealed by high-resolution genetic mapping of the mucosa-associated gut microbiome in hybrid mice

genetics more details view paper
  • Downloaded 783 times
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    • Site-wide: 55,607
    • In genetics: 2,238
  • Year to date:
    • Site-wide: 23,304
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    • Site-wide: 57,085

Genetic determinants of risk and survival in pulmonary arterial hypertension

genetics more details view paper
  • Downloaded 763 times
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    • Site-wide: 57,713
    • In genetics: 2,220
  • Year to date:
    • Site-wide: 167,226
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Immune-related genetic enrichment in frontotemporal dementia

genetics more details view paper
  • Downloaded 703 times
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    • Site-wide: 65,056
    • In genetics: 2,416
  • Year to date:
    • Site-wide: 200,042
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Genome-wide association study of Alzheimer's disease CSF biomarkers in the EMIF-AD Multimodal Biomarker Discovery dataset

genomics more details view paper
  • Downloaded 703 times
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    • Site-wide: 65,064
    • In genomics: 4,397
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    • Site-wide: 170,614
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Common variants in ABCG8 and TRAF3 genes confer risk for gallstone disease and gallbladder cancer in admixed Latinos with Mapuche Native American ancestry

genetics more details view paper
  • Downloaded 678 times
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    • Site-wide: 68,467
    • In genetics: 2,627
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    • Site-wide: 126,464
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Hemibiotrophic fungal pathogen induces systemic susceptibility and systemic shifts in wheat metabolome and microbiome composition

plant biology more details view paper
  • Downloaded 636 times
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    • Site-wide: 74,682
    • In plant biology: 1,741
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Genome-wide analysis of 944,133 individuals provides insights into the etiology of hemorrhoidal disease

genetic and genomic medicine more details view paper
  • Downloaded 507 times
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    • Site-wide: 98,454
    • In genetic and genomic medicine: 593
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Occasional paternal inheritance of the germline-restricted chromosome in songbirds

genomics more details view paper
  • Downloaded 506 times
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    • Site-wide: 98,856
    • In genomics: 5,815
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Depletion of erythropoietic miR-486-5p and miR-451a improves detectability of rare microRNAs in peripheral blood-derived small RNA sequencing libraries

molecular biology more details view paper
  • Downloaded 496 times
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    • Site-wide: 101,103
    • In molecular biology: 2,849
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    • Site-wide: 177,584
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Genome-wide association study identifies two new loci associated with anti-NMDAR encephalitis

neurology more details view paper
  • Downloaded 460 times
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    • Site-wide: 109,593
    • In neurology: 463
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    • Site-wide: 48,790
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Entorhinal cortex epigenome-wide association study highlights four novel loci showing differential methylation in Alzheimer's disease

genomics more details view paper
  • Downloaded 427 times
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    • Site-wide: 117,823
    • In genomics: 6,757
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    • Site-wide: 34,720
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EagleImp-Web: A Fast and Secure Genotype Phasing and Imputation Web Service using Field-Programmable Gate Arrays

bioinformatics more details view paper
  • Downloaded 425 times
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    • Site-wide: 118,362
    • In bioinformatics: 10,211
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    • Site-wide: 36,794

Genetic risk for Alzheimer`s disease predicts hippocampal volume through the lifespan

neuroscience more details view paper
  • Downloaded 416 times
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    • Site-wide: 120,555
    • In neuroscience: 17,418
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Genome-wide association study of autopsy-confirmed Multiple System Atrophy identifies common variants near ZIC1 and ZIC4

genetic and genomic medicine more details view paper
  • Downloaded 406 times
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    • Site-wide: 123,479
    • In genetic and genomic medicine: 868
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TMEM106B and CPOX are genetic determinants of cerebrospinal fluid Alzheimer's disease biomarker levels

genomics more details view paper
  • Downloaded 403 times
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    • Site-wide: 124,240
    • In genomics: 6,765
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Primate phageomes are structured by superhost phylogeny and environment

microbiology more details view paper
  • Downloaded 396 times
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    • Site-wide: 126,283
    • In microbiology: 8,271
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Identifying Crohns disease signal from variome analysis

bioinformatics more details view paper
  • Downloaded 350 times
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    • Site-wide: 139,510
    • In bioinformatics: 10,843
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Trans-ethnic analysis of the human leukocyte antigen region for ulcerative colitis reveals shared but also ethnicity-specific disease associations

genetic and genomic medicine more details view paper
  • Downloaded 332 times
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    • Site-wide: 144,852
    • In genetic and genomic medicine: 961
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    • Site-wide: 178,086
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    • Site-wide: 192,192

Pathogen Detection in RNA-Seq Data with Pathonoia

bioinformatics more details view paper
  • Downloaded 282 times
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    • Site-wide: 159,896
    • In bioinformatics: 12,470
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A correlation map of genome-wide DNA methylation patterns between paired human brain and buccal samples

genomics more details view paper
  • Downloaded 273 times
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    • Site-wide: 162,322
    • In genomics: 8,100
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    • Site-wide: 114,814

VCF2Prot: An Efficient and Parallel Tool for Generating Personalized Proteomes from VCF Files

genomics more details view paper
  • Downloaded 264 times
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    • Site-wide: 165,003
    • In genomics: 8,412
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    • Site-wide: 30,220
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Protective and aggressive bacterial subsets and metabolites modify hepatobiliary inflammation and fibrosis in PSC.

microbiology more details view paper
  • Downloaded 230 times
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    • Site-wide: 174,345
    • In microbiology: 12,663
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MAGScoT - a fast, lightweight, and accurate bin-refinement software

bioinformatics more details view paper
  • Downloaded 226 times
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    • Site-wide: 175,295
    • In bioinformatics: 13,515
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Predicting Peptide HLA-II Presentation Using Immunopeptidomics, Transcriptomics and Deep Multimodal Learning

bioinformatics more details view paper
  • Downloaded 106 times
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    • Site-wide: 200,108
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Crypt-top and crypt-bottom colonic epithelial cell microRNA profiling reveals cell type-specific response in active and quiescent ulcerative colitis

gastroenterology more details view paper
  • Downloaded 46 times
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    • Site-wide: 208,599
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