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Author: Yi Yang

Rankings

  • All-time downloads: 32,224 (rank: 8,485 )
  • Categories:
    • biochemistry: 685 (rank: 13,837 (tie) )
    • bioengineering: 1,094 (rank: 5,681 (tie) )
    • bioinformatics: 5,882 (rank: 2,808 )
    • ecology: 745 (rank: 9,196 (tie) )
    • genetics: 1,332 (rank: 16,194 (tie) )
    • genomics: 5,835 (rank: 5,315 (tie) )
    • immunology: 5,733 (rank: 2,850 )
    • infectious diseases: 5,111 (rank: 12,812 (tie) )
    • microbiology: 1,980 (rank: 11,501 (tie) )
    • molecular biology: 749 (rank: 13,766 (tie) )
    • neurology: 96 (rank: 12,382 (tie) )
    • pathology: 538 (rank: 4,160 (tie) )
    • systems biology: 278 (rank: 16,008 (tie) )

Downloads per author, site-wide

Preprints

REAP: A platform to identify autoantibodies that target the human exoproteome

immunology more details view paper
  • Downloaded 4,551 times
  • Download rankings, all-time:
    • Site-wide: 3,881
    • In immunology: 158
  • Year to date:
    • Site-wide: 2,152
  • Since beginning of last month:
    • Site-wide: 4,626

Effect of continuous renal replacement therapy on all-cause mortality in COVID-19 patients undergoing invasive mechanical ventilation: a retrospective cohort study

infectious diseases more details view paper
  • Downloaded 4,384 times
  • Download rankings, all-time:
    • Site-wide: 4,078
    • In infectious diseases: 901
  • Year to date:
    • Site-wide: 28,909
  • Since beginning of last month:
    • Site-wide: 28,582

Simultaneous SNP selection and adjustment for population structure in high dimensional prediction models

bioinformatics more details view paper
  • Downloaded 2,291 times
  • Download rankings, all-time:
    • Site-wide: 10,603
    • In bioinformatics: 1,088
  • Year to date:
    • Site-wide: 66,544
  • Since beginning of last month:
    • Site-wide: 175,565

The origin of domestication genes in goats

genomics more details view paper
  • Downloaded 1,252 times
  • Download rankings, all-time:
    • Site-wide: 27,172
    • In genomics: 2,294
  • Year to date:
    • Site-wide: 72,921
  • Since beginning of last month:
    • Site-wide: 180,840

A Sparse Additive Model for High-Dimensional Interactions with an Exposure Variable

bioinformatics more details view paper
  • Downloaded 1,248 times
  • Download rankings, all-time:
    • Site-wide: 27,298
    • In bioinformatics: 3,092
  • Year to date:
    • Site-wide: 42,466
  • Since beginning of last month:
    • Site-wide: 14,763

Deep Unfolded Robust PCA with Application to Clutter Suppression in Ultrasound

bioengineering more details view paper
  • Downloaded 1,177 times
  • Download rankings, all-time:
    • Site-wide: 29,915
    • In bioengineering: 580
  • Year to date:
    • Site-wide: 39,635
  • Since beginning of last month:
    • Site-wide: 14,743

MR-LDP: a two-sample Mendelian randomization for GWAS summary statistics accounting for linkage disequilibrium and horizontal pleiotropy

genetics more details view paper
  • Downloaded 1,163 times
  • Download rankings, all-time:
    • Site-wide: 30,477
    • In genetics: 1,200
  • Year to date:
    • Site-wide: 150,873
  • Since beginning of last month:
    • Site-wide: None

Joint dimension reduction and clustering analysis for single-cell RNA-seq and spatial transcriptomics data

genomics more details view paper
  • Downloaded 1,128 times
  • Download rankings, all-time:
    • Site-wide: 32,013
    • In genomics: 2,683
  • Year to date:
    • Site-wide: 4,148
  • Since beginning of last month:
    • Site-wide: 44,485

A high-quality de novo genome assembly from a single parasitoid wasp

genomics more details view paper
  • Downloaded 1,084 times
  • Download rankings, all-time:
    • Site-wide: 34,000
    • In genomics: 2,719
  • Year to date:
    • Site-wide: 62,271
  • Since beginning of last month:
    • Site-wide: None

Children Developing Celiac Disease Have a Distinct and Proinflammatory Gut Microbiota in the First 5 Years of Life

microbiology more details view paper
  • Downloaded 996 times
  • Download rankings, all-time:
    • Site-wide: 38,664
    • In microbiology: 2,430
  • Year to date:
    • Site-wide: 13,030
  • Since beginning of last month:
    • Site-wide: 10,674

An analytic approach for interpretable predictive models in high dimensional data, in the presence of interactions with exposures

genomics more details view paper
  • Downloaded 948 times
  • Download rankings, all-time:
    • Site-wide: 41,730
    • In genomics: 3,128
  • Year to date:
    • Site-wide: 196,279
  • Since beginning of last month:
    • Site-wide: None

Age differences in clinical features and outcomes in patients with COVID-19, Jiangsu, China: a retrospective, multi-center cohort study

infectious diseases more details view paper
  • Downloaded 897 times
  • Download rankings, all-time:
    • Site-wide: 45,360
    • In infectious diseases: 3,618
  • Year to date:
    • Site-wide: 52,211
  • Since beginning of last month:
    • Site-wide: 65,080

SC-MEB: spatial clustering with hidden Markov random field using empirical Bayes

genomics more details view paper
  • Downloaded 871 times
  • Download rankings, all-time:
    • Site-wide: 47,492
    • In genomics: 3,676
  • Year to date:
    • Site-wide: 26,459
  • Since beginning of last month:
    • Site-wide: 34,823

Redundant cytokine requirement for intestinal microbiota-induced Th17 cell differentiation in draining lymph nodes

immunology more details view paper
  • Downloaded 778 times
  • Download rankings, all-time:
    • Site-wide: 56,204
    • In immunology: 1,830
  • Year to date:
    • Site-wide: 109,000
  • Since beginning of last month:
    • Site-wide: 53,920

CoMM-S2: a collaborative mixed model using summary statistics in transcriptome-wide association studies

bioinformatics more details view paper
  • Downloaded 707 times
  • Download rankings, all-time:
    • Site-wide: 64,606
    • In bioinformatics: 6,181
  • Year to date:
    • Site-wide: 71,490
  • Since beginning of last month:
    • Site-wide: 51,386

A tissue-specific collaborative mixed model for jointly analyzing multiple tissues in transcriptome-wide association studies

bioinformatics more details view paper
  • Downloaded 675 times
  • Download rankings, all-time:
    • Site-wide: 68,977
    • In bioinformatics: 6,323
  • Year to date:
    • Site-wide: 158,757
  • Since beginning of last month:
    • Site-wide: 76,263

Tripartite holobiont system in a vent snail broadens the concept of chemosymbiosis

ecology more details view paper
  • Downloaded 569 times
  • Download rankings, all-time:
    • Site-wide: 86,031
    • In ecology: 2,142
  • Year to date:
    • Site-wide: 76,936
  • Since beginning of last month:
    • Site-wide: 142,227

A dynamic regulatory interface on SARS-CoV-2 RNA polymerase

molecular biology more details view paper
  • Downloaded 568 times
  • Download rankings, all-time:
    • Site-wide: 86,273
    • In molecular biology: 2,402
  • Year to date:
    • Site-wide: 130,497
  • Since beginning of last month:
    • Site-wide: 114,617

PTRNAmark: an all-atomic distance-dependent knowledge-based potential for 3D RNA structure evaluation

bioinformatics more details view paper
  • Downloaded 558 times
  • Download rankings, all-time:
    • Site-wide: 88,133
    • In bioinformatics: 7,744
  • Year to date:
    • Site-wide: 169,168
  • Since beginning of last month:
    • Site-wide: 39,427

β-lactam Antibiotics Stimulate the Pathogenicity of Methicillin-resistant Staphylococcus aureus Via SarA-controlled Tandem Lipoprotein Expression

pathology more details view paper
  • Downloaded 556 times
  • Download rankings, all-time:
    • Site-wide: 88,637
    • In pathology: 395
  • Year to date:
    • Site-wide: 143,976
  • Since beginning of last month:
    • Site-wide: 80,404

Dual symbiosis in the deep-sea hydrothermal vent snail Gigantopelta aegis revealed by its hologenome

genomics more details view paper
  • Downloaded 533 times
  • Download rankings, all-time:
    • Site-wide: 93,071
    • In genomics: 5,864
  • Year to date:
    • Site-wide: 80,481
  • Since beginning of last month:
    • Site-wide: 28,404

GproDIA enables data-independent acquisition glycoproteomics with comprehensive statistical control

bioinformatics more details view paper
  • Downloaded 529 times
  • Download rankings, all-time:
    • Site-wide: 93,915
    • In bioinformatics: 7,964
  • Year to date:
    • Site-wide: 65,533
  • Since beginning of last month:
    • Site-wide: 168,919

Pan-genome analysis reveals the molecular basis of niche adaptation of Staphylococcus epidermidis strains

microbiology more details view paper
  • Downloaded 518 times
  • Download rankings, all-time:
    • Site-wide: 96,314
    • In microbiology: 5,961
  • Year to date:
    • Site-wide: 175,229
  • Since beginning of last month:
    • Site-wide: 154,126

Screening of HLA-A restricted T cell epitopes of SARS-CoV-2 and induction of CD8+ T cell responses in HLA-A transgenic mice

immunology more details view paper
  • Downloaded 476 times
  • Download rankings, all-time:
    • Site-wide: 106,014
    • In immunology: 3,323
  • Year to date:
    • Site-wide: 76,019
  • Since beginning of last month:
    • Site-wide: 43,686

Probabilistic embedding, clustering, and alignment for integrating spatial transcriptomics data with PRECAST

genomics more details view paper
  • Downloaded 471 times
  • Download rankings, all-time:
    • Site-wide: 107,227
    • In genomics: 7,890
  • Year to date:
    • Site-wide: 11,948
  • Since beginning of last month:
    • Site-wide: 13,127

Crystal structure of chromo barrel domain of RBBP1

biochemistry more details view paper
  • Downloaded 370 times
  • Download rankings, all-time:
    • Site-wide: 134,025
    • In biochemistry: 3,879
  • Year to date:
    • Site-wide: 181,957
  • Since beginning of last month:
    • Site-wide: 77,611

hFUT1-based live cell assay to profile α1-2-fucosides enhanced influenza A virus infection

biochemistry more details view paper
  • Downloaded 355 times
  • Download rankings, all-time:
    • Site-wide: 138,343
    • In biochemistry: 3,989
  • Year to date:
    • Site-wide: 202,517
  • Since beginning of last month:
    • Site-wide: 109,911

An Unexpected Single-step Glycosylation Enables the Construction of Antibody-Biomacromolecule Conjugates as Therapeutics

biochemistry more details view paper
  • Downloaded 346 times
  • Download rankings, all-time:
    • Site-wide: 140,916
    • In biochemistry: None
  • Year to date:
    • Site-wide: 19,984
  • Since beginning of last month:
    • Site-wide: 2,592

Computationally reconstructed interactome of Bradyrhizobium diazoefficiens USDA110 reveals novel functional modules and protein hubs for symbiotic nitrogen fixation

systems biology more details view paper
  • Downloaded 300 times
  • Download rankings, all-time:
    • Site-wide: 154,774
    • In systems biology: 3,069
  • Year to date:
    • Site-wide: 62,570
  • Since beginning of last month:
    • Site-wide: 171,798

Emergent vulnerability to intensive coastal anthropogenic disturbances in mangrove forests

ecology more details view paper
  • Downloaded 248 times
  • Download rankings, all-time:
    • Site-wide: 169,910
    • In ecology: 5,676
  • Year to date:
    • Site-wide: 96,184
  • Since beginning of last month:
    • Site-wide: 51,512

Recombinant HcGAPDH Protein Expressed on Probiotic Bacillus subtilis Spores Protects Sheep from Haemonchus contortus Infection by Inducing both Humoral and Cell-mediated Responses

microbiology more details view paper
  • Downloaded 245 times
  • Download rankings, all-time:
    • Site-wide: 170,609
    • In microbiology: 12,121
  • Year to date:
    • Site-wide: 155,025
  • Since beginning of last month:
    • Site-wide: 185,038

SpatialDEG: Identification of differentially expressed genes by leveraging spatial information in spatially resolved transcriptomic studies

genetics more details view paper
  • Downloaded 228 times
  • Download rankings, all-time:
    • Site-wide: 175,256
    • In genetics: 6,404
  • Year to date:
    • Site-wide: 37,874
  • Since beginning of last month:
    • Site-wide: 86,411

Regulating AMPK and insulin level by Vinegar, Swimming and Refeeding on High-Fat Diet Rats to Rebuild Lipid Homeostasis

molecular biology more details view paper
  • Downloaded 224 times
  • Download rankings, all-time:
    • Site-wide: 176,191
    • In molecular biology: 5,164
  • Year to date:
    • Site-wide: 191,229
  • Since beginning of last month:
    • Site-wide: 108,015

The synergistic effects of plants and nitrogen on microbial hitchhiking

microbiology more details view paper
  • Downloaded 220 times
  • Download rankings, all-time:
    • Site-wide: 177,284
    • In microbiology: 14,152
  • Year to date:
    • Site-wide: 39,845
  • Since beginning of last month:
    • Site-wide: None

A Safe and Effective Mucosal RSV Vaccine Consisting of RSV Phosphoprotein and Flagellin Variant

immunology more details view paper
  • Downloaded 215 times
  • Download rankings, all-time:
    • Site-wide: 178,538
    • In immunology: 5,523
  • Year to date:
    • Site-wide: 118,595
  • Since beginning of last month:
    • Site-wide: 116,816

Aerobic glycolysis supports hepatitis B virus biosynthesis through interaction between viral surface antigen and pyruvate kinase isoform M2

microbiology more details view paper
  • Downloaded 209 times
  • Download rankings, all-time:
    • Site-wide: 180,032
    • In microbiology: 13,016
  • Year to date:
    • Site-wide: 177,540
  • Since beginning of last month:
    • Site-wide: 158,848

MINE is a method for detecting spatial density of regulatory chromatin interactions based on a MultI-modal NEtwork

bioinformatics more details view paper
  • Downloaded 132 times
  • Download rankings, all-time:
    • Site-wide: 195,995
    • In bioinformatics: 13,954
  • Year to date:
    • Site-wide: 74,100
  • Since beginning of last month:
    • Site-wide: 186,108

Characterization of the gene expression profile in younger and older low-grade glioma patients

neurology more details view paper
  • Downloaded 119 times
  • Download rankings, all-time:
    • Site-wide: 198,276
    • In neurology: 1,366
  • Year to date:
    • Site-wide: 81,282
  • Since beginning of last month:
    • Site-wide: None

Phosphorylation of the Smooth Muscle Master Splicing Regulator RBPMS Regulates its Splicing Activity

molecular biology more details view paper
  • Downloaded 85 times
  • Download rankings, all-time:
    • Site-wide: 203,562
    • In molecular biology: None
  • Year to date:
    • Site-wide: 110,193
  • Since beginning of last month:
    • Site-wide: 72,556

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