Author: Joel Armstrong

Downloads per author, site-wide

Preprints

Efficient de novo assembly of eleven human genomes using PromethION sequencing and a novel nanopore toolkit

• Downloaded 8,681 times
• Download rankings, all-time:
  • Site-wide: 959
  • In bioinformatics: 55
• Year to date:
  • Site-wide: 5,682
• Since beginning of last month:
  • Site-wide: 6,254

Rapid and efficient analysis of 20,000 RNA-seq samples with Toil

• Downloaded 6,473 times
• Download rankings, all-time:
  • Site-wide: 1,388
  • In bioinformatics: 93
• Year to date:
  • Site-wide: 26,274
• Since beginning of last month:
  • Site-wide: 30,352

Telomere-to-telomere assembly of a complete human X chromosome

• Downloaded 6,372 times
• Download rankings, all-time:
  • Site-wide: 1,414
  • In bioinformatics: 96
• Year to date:
  • Site-wide: 10,758
• Since beginning of last month:
  • Site-wide: 9,864

Progressive alignment with Cactus: a multiple-genome aligner for the thousand-genome era

• Downloaded 3,710 times
• Download rankings, all-time:
  • Site-wide: 3,028
  • In genomics: 346
• Year to date:
  • Site-wide: 7,275
• Since beginning of last month:
  • Site-wide: 10,883

Comparative Annotation Toolkit (CAT) - simultaneous clade and personal genome annotation

• Downloaded 1,948 times
• Download rankings, all-time:
  • Site-wide: 7,701
  • In bioinformatics: 935
• Year to date:
  • Site-wide: 27,742
• Since beginning of last month:
  • Site-wide: 31,808

Chromosome assembly of large and complex genomes using multiple references

• Downloaded 1,820 times
• Download rankings, all-time:
  • Site-wide: 8,555
  • In bioinformatics: 1,039
• Year to date:
  • Site-wide: 73,254
• Since beginning of last month:
  • Site-wide: 74,063

Multiple laboratory mouse reference genomes define strain specific haplotypes and novel functional loci

• Downloaded 1,475 times
• Download rankings, all-time:
  • Site-wide: 11,619
  • In genomics: 1,271
• Year to date:
  • Site-wide: 68,587
• Since beginning of last month:
  • Site-wide: 64,148

The genome of C57BL/6J "Eve", the mother of the laboratory mouse genome reference strain

• Downloaded 1,006 times
• Download rankings, all-time:
  • Site-wide: 20,661
  • In genomics: 2,065
• Year to date:
  • Site-wide: 50,016
• Since beginning of last month:
  • Site-wide: 67,034

Improved genome assembly of American alligator genome reveals conserved architecture of estrogen signaling

• Downloaded 650 times
• Download rankings, all-time:
  • Site-wide: 38,037
  • In genomics: 3,215
• Year to date:
  • Site-wide: 116,702
• Since beginning of last month:
  • Site-wide: 102,928

Predicting transfer RNA gene activity from sequence and genome context

• Downloaded 617 times
• Download rankings, all-time:
  • Site-wide: 40,664
  • In bioinformatics: 4,406
• Year to date:
  • Site-wide: 76,729
• Since beginning of last month:
  • Site-wide: 66,210

KRAB Zinc Finger Proteins coordinate across evolutionary time scales to battle retroelements

• Downloaded 604 times
• Download rankings, all-time:
  • Site-wide: 41,806
  • In evolutionary biology: 2,161
• Year to date:
  • Site-wide: 68,227
• Since beginning of last month:
  • Site-wide: 101,864