Author: Kyle Ellrott

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Preprints

Large-Scale Uniform Analysis of Cancer Whole Genomes in Multiple Computing Environments

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  • In genomics: 640 out of 6,455
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  • Site-wide: 78,277 out of 119,003

Creating Standards for Evaluating Tumour Subclonal Reconstruction

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  • In bioinformatics: 830 out of 9,624
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neoepiscope improves neoepitope prediction with multi-variant phasing

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  • In bioinformatics: 1,476 out of 9,624
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  • Site-wide: 32,420 out of 119,003
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  • Site-wide: 20,431 out of 119,003

Population-level distribution and putative immunogenicity of cancer neoepitopes

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  • In cancer biology: 386 out of 3,768
• Year to date:
  • Site-wide: 66,200 out of 119,003
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  • Site-wide: 52,132 out of 119,003

Combining accurate tumour genome simulation with crowd-sourcing to benchmark somatic structural variant detection

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  • In bioinformatics: 2,482 out of 9,624
• Year to date:
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  • Site-wide: 51,326 out of 119,003

Exploring Integrative Analysis using the BioMedical Evidence Graph

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  • In cancer biology: 2,002 out of 3,768
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  • Site-wide: 43,421 out of 119,003

Germline Contamination and Leakage in Whole Genome Somatic Single Nucleotide Variant Detection

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  • In genomics: 5,176 out of 6,455
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  • Site-wide: 110,682 out of 119,003

Valection: Design Optimization for Validation and Verification Studies

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  • Site-wide: 78,918 out of 119,003
  • In bioinformatics: 7,269 out of 9,624
• Year to date:
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• Since beginning of last month:
  • Site-wide: 109,110 out of 119,003