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Author: Hidewaki Nakagawa

  • Most recently observed institution: Laboratory for Genome Sequencing Analysis, RIKEN Center for Integrative Medical Sciences, Tokyo, Japan

Rankings

  • All-time downloads: 30,119 (rank: 4,700 )
  • Categories:
    • bioinformatics: 875 (rank: 15,310 (tie) )
    • cancer biology: 5,400 (rank: 447 (tie) )
    • genetics: 3,756 (rank: 4,513 (tie) )
    • genomics: 19,622 (rank: 525 )
    • oncology: 466 (rank: 1,109 (tie) )

Downloads per author, site-wide

Preprints

Germline determinants of the somatic mutation landscape in 2,642 cancer genomes

genomics more details view paper
  • Downloaded 5,298 times
  • Download rankings, all-time:
    • Site-wide: 1,714
    • In genomics: 173
  • Year to date:
    • Site-wide: 13,070
  • Since beginning of last month:
    • Site-wide: 13,070

Mutational signatures associated with tobacco smoking in human cancer

cancer biology more details view paper
  • Downloaded 3,455 times
  • Download rankings, all-time:
    • Site-wide: 3,156
    • In cancer biology: 50
  • Year to date:
    • Site-wide: 98,422
  • Since beginning of last month:
    • Site-wide: 98,422

Immuno-genomic Pan-cancer Landscape Reveals Diverse Immune Escape Mechanisms and Immuno-Editing Histories

genomics more details view paper
  • Downloaded 2,863 times
  • Download rankings, all-time:
    • Site-wide: 4,083
    • In genomics: 476
  • Year to date:
    • Site-wide: 16,533
  • Since beginning of last month:
    • Site-wide: 16,533

Comprehensive Molecular Characterization of Mitochondrial Genomes in Human Cancers

genomics more details view paper
  • Downloaded 2,605 times
  • Download rankings, all-time:
    • Site-wide: 4,721
    • In genomics: 548
  • Year to date:
    • Site-wide: 27,352
  • Since beginning of last month:
    • Site-wide: 27,352

A Comprehensive Assessment of Somatic Mutation Calling in Cancer Genomes

genomics more details view paper
  • Downloaded 2,400 times
  • Download rankings, all-time:
    • Site-wide: 5,329
    • In genomics: 630
  • Year to date:
    • Site-wide: 83,662
  • Since beginning of last month:
    • Site-wide: 83,662

Large-Scale Uniform Analysis of Cancer Whole Genomes in Multiple Computing Environments

genomics more details view paper
  • Downloaded 2,307 times
  • Download rankings, all-time:
    • Site-wide: 5,653
    • In genomics: 659
  • Year to date:
    • Site-wide: 26,109
  • Since beginning of last month:
    • Site-wide: 26,109

Large scale genome-wide association study in a Japanese population identified 45 novel susceptibility loci for 22 diseases

genetics more details view paper
  • Downloaded 2,178 times
  • Download rankings, all-time:
    • Site-wide: 6,103
    • In genetics: 301
  • Year to date:
    • Site-wide: 8,280
  • Since beginning of last month:
    • Site-wide: 8,280

A comprehensive multicenter comparison of whole genome sequencing pipelines using a uniform tumor-normal sample pair

genomics more details view paper
  • Downloaded 2,146 times
  • Download rankings, all-time:
    • Site-wide: 6,256
    • In genomics: 721
  • Year to date:
    • Site-wide: 85,127
  • Since beginning of last month:
    • Site-wide: 85,127

Whole genome and RNA sequencing of 1,220 cancers reveals hundreds of genes deregulated by rearrangement of cis-regulatory elements

genomics more details view paper
  • Downloaded 1,545 times
  • Download rankings, all-time:
    • Site-wide: 10,218
    • In genomics: 1,133
  • Year to date:
    • Site-wide: 73,701
  • Since beginning of last month:
    • Site-wide: 73,701

Comprehensive Analysis of Indels in Whole-genome Microsatellite Regions and Microsatellite Instability across 21 Cancer Types

cancer biology more details view paper
  • Downloaded 1,229 times
  • Download rankings, all-time:
    • Site-wide: 14,395
    • In cancer biology: 311
  • Year to date:
    • Site-wide: 54,039
  • Since beginning of last month:
    • Site-wide: 54,039

In-depth characterization of the cisplatin mutational signature in human cell lines and in esophageal and liver tumors

cancer biology more details view paper
  • Downloaded 716 times
  • Download rankings, all-time:
    • Site-wide: 31,393
    • In cancer biology: 844
  • Year to date:
    • Site-wide: 79,233
  • Since beginning of last month:
    • Site-wide: 79,233

Quantifying Immune-Based Counterselection of Somatic Mutations

genetics more details view paper
  • Downloaded 715 times
  • Download rankings, all-time:
    • Site-wide: 31,462
    • In genetics: 1,563
  • Year to date:
    • Site-wide: 83,738
  • Since beginning of last month:
    • Site-wide: 83,738

Endogenization and excision of human herpesvirus 6 in human genomes

genetics more details view paper
  • Downloaded 640 times
  • Download rankings, all-time:
    • Site-wide: 36,542
    • In genetics: 1,786
  • Year to date:
    • Site-wide: 80,893
  • Since beginning of last month:
    • Site-wide: 80,893

ALPHLARD: a Bayesian method for analyzing HLA genes from whole genome sequence data

bioinformatics more details view paper
  • Downloaded 553 times
  • Download rankings, all-time:
    • Site-wide: 43,883
    • In bioinformatics: 4,693
  • Year to date:
    • Site-wide: 112,532
  • Since beginning of last month:
    • Site-wide: 112,532

Somatic mutation landscape reveals differential variability of cell-of-origin for primary liver cancer

genomics more details view paper
  • Downloaded 458 times
  • Download rankings, all-time:
    • Site-wide: 54,551
    • In genomics: 4,179
  • Year to date:
    • Site-wide: 112,154
  • Since beginning of last month:
    • Site-wide: 112,154

A multifunctional R package for identification of tumor-specific neoantigens

bioinformatics more details view paper
  • Downloaded 322 times
  • Download rankings, all-time:
    • Site-wide: 75,881
    • In bioinformatics: 7,046
  • Year to date:
    • Site-wide: 116,016
  • Since beginning of last month:
    • Site-wide: 116,016

Frequent post-treatment monitoring of colorectal cancer using individualized ctDNA validated by multi-regional molecular profiling

oncology more details view paper
  • Downloaded 243 times
  • Download rankings, all-time:
    • Site-wide: 92,233
    • In oncology: 161
  • Year to date:
    • Site-wide: 64,789
  • Since beginning of last month:
    • Site-wide: 64,789

Circulating-tumor DNA from Two Types of Blood Collection Tubes for Monitoring Tumor Burden Validated with Esophageal Squamous Cell Carcinoma Patients

oncology more details view paper
  • Downloaded 223 times
  • Download rankings, all-time:
    • Site-wide: 96,509
    • In oncology: 183
  • Year to date:
    • Site-wide: 21,408
  • Since beginning of last month:
    • Site-wide: 21,408

Population-wide Screening for Germline Variants of Hereditary Cancer Genes in 12K Unselected Japanese Colorectal Cancers and 27K Controls

genetics more details view paper
  • Downloaded 223 times
  • Download rankings, all-time:
    • Site-wide: 96,425
    • In genetics: 4,392
  • Year to date:
    • Site-wide: 40,013
  • Since beginning of last month:
    • Site-wide: 40,013

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