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Author: Hidewaki Nakagawa

  • Most recently observed institution: Laboratory for Cancer Genomics, RIKEN Center for Integrative Medical Sciences, Yokohama, Japan

Rankings

  • All-time downloads: 33,857 (rank: 6,605 )
  • Categories:
    • bioinformatics: 1,001 (rank: 18,341 (tie) )
    • cancer biology: 6,495 (rank: 538 )
    • genetics: 4,665 (rank: 4,446 (tie) )
    • genomics: 20,713 (rank: 688 )
    • oncology: 983 (rank: 941 (tie) )

Downloads per author, site-wide

Preprints

Germline determinants of the somatic mutation landscape in 2,642 cancer genomes

genomics more details view paper
  • Downloaded 5,551 times
  • Download rankings, all-time:
    • Site-wide: 2,450
    • In genomics: 203
  • Year to date:
    • Site-wide: 59,439
  • Since beginning of last month:
    • Site-wide: 41,137

Mutational signatures associated with tobacco smoking in human cancer

cancer biology more details view paper
  • Downloaded 3,626 times
  • Download rankings, all-time:
    • Site-wide: 4,408
    • In cancer biology: 59
  • Year to date:
    • Site-wide: 77,133
  • Since beginning of last month:
    • Site-wide: 103,760

Immuno-genomic Pan-cancer Landscape Reveals Diverse Immune Escape Mechanisms and Immuno-Editing Histories

genomics more details view paper
  • Downloaded 3,118 times
  • Download rankings, all-time:
    • Site-wide: 5,447
    • In genomics: 531
  • Year to date:
    • Site-wide: 47,327
  • Since beginning of last month:
    • Site-wide: 70,501

Large scale genome-wide association study in a Japanese population identified 45 novel susceptibility loci for 22 diseases

genetics more details view paper
  • Downloaded 2,838 times
  • Download rankings, all-time:
    • Site-wide: 6,250
    • In genetics: 241
  • Year to date:
    • Site-wide: 16,566
  • Since beginning of last month:
    • Site-wide: 22,448

Comprehensive Molecular Characterization of Mitochondrial Genomes in Human Cancers

genomics more details view paper
  • Downloaded 2,690 times
  • Download rankings, all-time:
    • Site-wide: 6,758
    • In genomics: 660
  • Year to date:
    • Site-wide: 99,907
  • Since beginning of last month:
    • Site-wide: 71,478

Large-Scale Uniform Analysis of Cancer Whole Genomes in Multiple Computing Environments

genomics more details view paper
  • Downloaded 2,527 times
  • Download rankings, all-time:
    • Site-wide: 7,406
    • In genomics: 743
  • Year to date:
    • Site-wide: 36,017
  • Since beginning of last month:
    • Site-wide: 71,476

A Comprehensive Assessment of Somatic Mutation Calling in Cancer Genomes

genomics more details view paper
  • Downloaded 2,449 times
  • Download rankings, all-time:
    • Site-wide: 7,740
    • In genomics: 770
  • Year to date:
    • Site-wide: 100,109
  • Since beginning of last month:
    • Site-wide: 121,812

A comprehensive multicenter comparison of whole genome sequencing pipelines using a uniform tumor-normal sample pair

genomics more details view paper
  • Downloaded 2,249 times
  • Download rankings, all-time:
    • Site-wide: 8,792
    • In genomics: 862
  • Year to date:
    • Site-wide: 100,093
  • Since beginning of last month:
    • Site-wide: 162,505

Whole genome and RNA sequencing of 1,220 cancers reveals hundreds of genes deregulated by rearrangement of cis-regulatory elements

genomics more details view paper
  • Downloaded 1,629 times
  • Download rankings, all-time:
    • Site-wide: 14,144
    • In genomics: 1,360
  • Year to date:
    • Site-wide: 76,771
  • Since beginning of last month:
    • Site-wide: 101,355

Comprehensive Analysis of Indels in Whole-genome Microsatellite Regions and Microsatellite Instability across 21 Cancer Types

cancer biology more details view paper
  • Downloaded 1,345 times
  • Download rankings, all-time:
    • Site-wide: 19,006
    • In cancer biology: 421
  • Year to date:
    • Site-wide: 28,942
  • Since beginning of last month:
    • Site-wide: 158,227

In-depth characterization of the cisplatin mutational signature in human cell lines and in esophageal and liver tumors

cancer biology more details view paper
  • Downloaded 774 times
  • Download rankings, all-time:
    • Site-wide: 43,161
    • In cancer biology: 1,184
  • Year to date:
    • Site-wide: 137,591
  • Since beginning of last month:
    • Site-wide: 162,283

Quantifying Immune-Based Counterselection of Somatic Mutations

genetics more details view paper
  • Downloaded 763 times
  • Download rankings, all-time:
    • Site-wide: 44,090
    • In genetics: 1,865
  • Year to date:
    • Site-wide: 100,167
  • Since beginning of last month:
    • Site-wide: 61,882

Endogenization and excision of human herpesvirus 6 in human genomes

genetics more details view paper
  • Downloaded 706 times
  • Download rankings, all-time:
    • Site-wide: 49,173
    • In genetics: 2,073
  • Year to date:
    • Site-wide: 87,894
  • Since beginning of last month:
    • Site-wide: 140,258

Circulating-tumor DNA from Two Types of Blood Collection Tubes for Monitoring Tumor Burden Validated with Esophageal Squamous Cell Carcinoma Patients

oncology more details view paper
  • Downloaded 608 times
  • Download rankings, all-time:
    • Site-wide: 59,997
    • In oncology: 95
  • Year to date:
    • Site-wide: 49,269
  • Since beginning of last month:
    • Site-wide: 13,104

ALPHLARD: a Bayesian method for analyzing HLA genes from whole genome sequence data

bioinformatics more details view paper
  • Downloaded 598 times
  • Download rankings, all-time:
    • Site-wide: 61,359
    • In bioinformatics: 5,969
  • Year to date:
    • Site-wide: None
  • Since beginning of last month:
    • Site-wide: 94,611

Aberrant integration of Hepatitis B virus DNA promotes major restructuring of human hepatocellular carcinoma genome architecture

cancer biology more details view paper
  • Downloaded 508 times
  • Download rankings, all-time:
    • Site-wide: 74,701
    • In cancer biology: 2,172
  • Year to date:
    • Site-wide: 95,352
  • Since beginning of last month:
    • Site-wide: 26,319

Somatic mutation landscape reveals differential variability of cell-of-origin for primary liver cancer

genomics more details view paper
  • Downloaded 500 times
  • Download rankings, all-time:
    • Site-wide: 75,924
    • In genomics: 5,091
  • Year to date:
    • Site-wide: 148,879
  • Since beginning of last month:
    • Site-wide: 100,255

A multifunctional R package for identification of tumor-specific neoantigens

bioinformatics more details view paper
  • Downloaded 403 times
  • Download rankings, all-time:
    • Site-wide: 95,197
    • In bioinformatics: 8,271
  • Year to date:
    • Site-wide: None
  • Since beginning of last month:
    • Site-wide: 87,932

Frequent post-treatment monitoring of colorectal cancer using individualized ctDNA validated by multi-regional molecular profiling

oncology more details view paper
  • Downloaded 375 times
  • Download rankings, all-time:
    • Site-wide: 101,681
    • In oncology: 236
  • Year to date:
    • Site-wide: 129,742
  • Since beginning of last month:
    • Site-wide: 73,784

Population-wide Screening for Germline Variants of Hereditary Cancer Genes in 12K Unselected Japanese Colorectal Cancers and 27K Controls

genetics more details view paper
  • Downloaded 358 times
  • Download rankings, all-time:
    • Site-wide: 105,806
    • In genetics: 4,310
  • Year to date:
    • Site-wide: 49,357
  • Since beginning of last month:
    • Site-wide: 43,654

Comprehensive analysis of full-length transcripts reveal aberrations of splicing variants in liver cancer

cancer biology more details view paper
  • Downloaded 242 times
  • Download rankings, all-time:
    • Site-wide: 136,578
    • In cancer biology: 4,176
  • Year to date:
    • Site-wide: 10,370
  • Since beginning of last month:
    • Site-wide: 32,333

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