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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 63,046 bioRxiv papers from 279,617 authors.

Author: Job Dekker

Rankings

  • All-time downloads: 47,972 (rank: 282 out of 279,617)
  • Categories:
    • biophysics: 4,040 (rank: 154 (tie) out of 10,946)
    • cell biology: 866 (rank: 3,134 (tie) out of 18,544)
    • developmental biology: 940 (rank: 1,475 (tie) out of 10,366)
    • genetics: 3,213 (rank: 3,617 out of 27,857)
    • genomics: 33,033 (rank: 171 out of 32,025)
    • molecular biology: 5,880 (rank: 100 out of 12,793)

Downloads per author, site-wide

Preprints

Targeted degradation of CTCF decouples local insulation of chromosome domains from higher-order genomic compartmentalization

genomics more details view paper
  • Downloaded 8,951 times
  • Download rankings, all-time:
    • Site-wide: 132 out of 63,046
    • In genomics: 43 out of 4,328
  • Year to date:
    • Site-wide: 22,118 out of 63,046
  • Since beginning of last month:
    • Site-wide: 26,617 out of 63,046

HI-C 2.0: AN OPTIMIZED HI-C PROCEDURE FOR HIGH-RESOLUTION GENOME-WIDE MAPPING OF CHROMOSOME CONFORMATION

genomics more details view paper
  • Downloaded 4,700 times
  • Download rankings, all-time:
    • Site-wide: 456 out of 63,046
    • In genomics: 122 out of 4,328
  • Year to date:
    • Site-wide: 1,821 out of 63,046
  • Since beginning of last month:
    • Site-wide: 3,785 out of 63,046

Heterochromatin drives organization of conventional and inverted nuclei

biophysics more details view paper
  • Downloaded 4,040 times
  • Download rankings, all-time:
    • Site-wide: 622 out of 63,046
    • In biophysics: 13 out of 2,673
  • Year to date:
    • Site-wide: 1,335 out of 63,046
  • Since beginning of last month:
    • Site-wide: 5,528 out of 63,046

An Integrative Framework For Detecting Structural Variations In Cancer Genomes

genomics more details view paper
  • Downloaded 3,944 times
  • Download rankings, all-time:
    • Site-wide: 647 out of 63,046
    • In genomics: 171 out of 4,328
  • Year to date:
    • Site-wide: 16,211 out of 63,046
  • Since beginning of last month:
    • Site-wide: 30,536 out of 63,046

The 4D Nucleome Project

genomics more details view paper
  • Downloaded 2,910 times
  • Download rankings, all-time:
    • Site-wide: 1,150 out of 63,046
    • In genomics: 274 out of 4,328
  • Year to date:
    • Site-wide: 31,599 out of 63,046
  • Since beginning of last month:
    • Site-wide: 26,908 out of 63,046

Measuring the reproducibility and quality of Hi-C data

genomics more details view paper
  • Downloaded 2,465 times
  • Download rankings, all-time:
    • Site-wide: 1,541 out of 63,046
    • In genomics: 346 out of 4,328
  • Year to date:
    • Site-wide: 4,187 out of 63,046
  • Since beginning of last month:
    • Site-wide: 15,094 out of 63,046

Mitotic chromosomes fold by condensin-dependent helical winding of chromatin loop arrays

genomics more details view paper
  • Downloaded 2,428 times
  • Download rankings, all-time:
    • Site-wide: 1,589 out of 63,046
    • In genomics: 356 out of 4,328
  • Year to date:
    • Site-wide: 10,481 out of 63,046
  • Since beginning of last month:
    • Site-wide: 11,222 out of 63,046

Ultrastructural details of mammalian chromosome architecture

genomics more details view paper
  • Downloaded 2,247 times
  • Download rankings, all-time:
    • Site-wide: 1,813 out of 63,046
    • In genomics: 404 out of 4,328
  • Year to date:
    • Site-wide: 318 out of 63,046
  • Since beginning of last month:
    • Site-wide: 2,069 out of 63,046

Heterogeneity and Intrinsic Variation in Spatial Genome Organization

molecular biology more details view paper
  • Downloaded 1,983 times
  • Download rankings, all-time:
    • Site-wide: 2,284 out of 63,046
    • In molecular biology: 62 out of 1,980
  • Year to date:
    • Site-wide: 11,425 out of 63,046
  • Since beginning of last month:
    • Site-wide: 20,293 out of 63,046

C-BERST: Defining subnuclear proteomic landscapes at genomic elements with dCas9-APEX2

molecular biology more details view paper
  • Downloaded 1,979 times
  • Download rankings, all-time:
    • Site-wide: 2,289 out of 63,046
    • In molecular biology: 63 out of 1,980
  • Year to date:
    • Site-wide: 11,784 out of 63,046
  • Since beginning of last month:
    • Site-wide: 14,111 out of 63,046

CTCF sites display cell cycle dependent dynamics in factor binding and nucleosome positioning

genomics more details view paper
  • Downloaded 1,807 times
  • Download rankings, all-time:
    • Site-wide: 2,669 out of 63,046
    • In genomics: 543 out of 4,328
  • Year to date:
    • Site-wide: 4,317 out of 63,046
  • Since beginning of last month:
    • Site-wide: 22,346 out of 63,046

Compartment-dependent chromatin interaction dynamics revealed by liquid chromatin Hi-C

genomics more details view paper
  • Downloaded 1,558 times
  • Download rankings, all-time:
    • Site-wide: 3,418 out of 63,046
    • In genomics: 651 out of 4,328
  • Year to date:
    • Site-wide: 654 out of 63,046
  • Since beginning of last month:
    • Site-wide: 505 out of 63,046

Single-cell chromatin interactions reveal regulatory hubs in dynamic compartmentalized domains

genetics more details view paper
  • Downloaded 1,507 times
  • Download rankings, all-time:
    • Site-wide: 3,614 out of 63,046
    • In genetics: 318 out of 3,574
  • Year to date:
    • Site-wide: 20,307 out of 63,046
  • Since beginning of last month:
    • Site-wide: 12,686 out of 63,046

Cohesin dependent compaction of mitotic chromosomes

genomics more details view paper
  • Downloaded 1,141 times
  • Download rankings, all-time:
    • Site-wide: 5,729 out of 63,046
    • In genomics: 963 out of 4,328
  • Year to date:
    • Site-wide: 35,565 out of 63,046
  • Since beginning of last month:
    • Site-wide: 40,896 out of 63,046

Higher-Order Organization Principles of Pre-translational mRNPs

molecular biology more details view paper
  • Downloaded 1,072 times
  • Download rankings, all-time:
    • Site-wide: 6,371 out of 63,046
    • In molecular biology: 187 out of 1,980
  • Year to date:
    • Site-wide: 39,171 out of 63,046
  • Since beginning of last month:
    • Site-wide: 49,795 out of 63,046

The genome-wide, multi-layered architecture of chromosome pairing in early Drosophila embryos

genetics more details view paper
  • Downloaded 969 times
  • Download rankings, all-time:
    • Site-wide: 7,448 out of 63,046
    • In genetics: 578 out of 3,574
  • Year to date:
    • Site-wide: 6,535 out of 63,046
  • Since beginning of last month:
    • Site-wide: 8,031 out of 63,046

The HoxD Cluster is a Dynamic and Resilient TAD Boundary Controling the Segregation of Antagonistic Regulatory Landscapes

developmental biology more details view paper
  • Downloaded 940 times
  • Download rankings, all-time:
    • Site-wide: 7,829 out of 63,046
    • In developmental biology: 166 out of 1,876
  • Year to date:
    • Site-wide: 38,175 out of 63,046
  • Since beginning of last month:
    • Site-wide: 42,913 out of 63,046

A chromosome folding intermediate at the condensin-to-cohesin transition during telophase

genomics more details view paper
  • Downloaded 882 times
  • Download rankings, all-time:
    • Site-wide: 8,679 out of 63,046
    • In genomics: 1,323 out of 4,328
  • Year to date:
    • Site-wide: 1,857 out of 63,046
  • Since beginning of last month:
    • Site-wide: 4,418 out of 63,046

Stag1 and Stag2 regulate cell fate decisions in hematopoiesis through non-redundant topological control

cell biology more details view paper
  • Downloaded 866 times
  • Download rankings, all-time:
    • Site-wide: 8,919 out of 63,046
    • In cell biology: 308 out of 3,008
  • Year to date:
    • Site-wide: 1,913 out of 63,046
  • Since beginning of last month:
    • Site-wide: 4,219 out of 63,046

The non-canonical SMC protein SmcHD1 antagonises TAD formation on the inactive X chromosome

molecular biology more details view paper
  • Downloaded 846 times
  • Download rankings, all-time:
    • Site-wide: 9,252 out of 63,046
    • In molecular biology: 279 out of 1,980
  • Year to date:
    • Site-wide: 30,802 out of 63,046
  • Since beginning of last month:
    • Site-wide: 53,462 out of 63,046

Highly Structured Homolog Pairing Reflects Functional Organization of the Drosophila Genome

genetics more details view paper
  • Downloaded 737 times
  • Download rankings, all-time:
    • Site-wide: 11,340 out of 63,046
    • In genetics: 808 out of 3,574
  • Year to date:
    • Site-wide: 10,120 out of 63,046
  • Since beginning of last month:
    • Site-wide: 15,655 out of 63,046

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