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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 57,793 bioRxiv papers from 266,023 authors.

Author: Job Dekker

Rankings

  • All-time downloads: 46,340 (rank: 276 out of 266,023)
  • Categories:
    • biophysics: 3,950 (rank: 149 (tie) out of 9,944)
    • cell biology: 738 (rank: 3,455 (tie) out of 16,921)
    • developmental biology: 925 (rank: 1,383 (tie) out of 9,455)
    • genetics: 3,065 (rank: 3,357 (tie) out of 25,343)
    • genomics: 31,881 (rank: 170 out of 30,373)
    • molecular biology: 5,781 (rank: 63 out of 11,546)

Downloads per author, site-wide

Preprints

Targeted degradation of CTCF decouples local insulation of chromosome domains from higher-order genomic compartmentalization

genomics more details view paper
  • Downloaded 8,915 times
  • Download rankings, all-time:
    • Site-wide: 127 out of 57,793
    • In genomics: 41 out of 4,057
  • Year to date:
    • Site-wide: 21,953 out of 57,793
  • Since beginning of last month:
    • Site-wide: 23,855 out of 57,793

HI-C 2.0: AN OPTIMIZED HI-C PROCEDURE FOR HIGH-RESOLUTION GENOME-WIDE MAPPING OF CHROMOSOME CONFORMATION

genomics more details view paper
  • Downloaded 4,589 times
  • Download rankings, all-time:
    • Site-wide: 432 out of 57,793
    • In genomics: 116 out of 4,057
  • Year to date:
    • Site-wide: 1,681 out of 57,793
  • Since beginning of last month:
    • Site-wide: 2,276 out of 57,793

Heterochromatin drives organization of conventional and inverted nuclei

biophysics more details view paper
  • Downloaded 3,950 times
  • Download rankings, all-time:
    • Site-wide: 589 out of 57,793
    • In biophysics: 12 out of 2,450
  • Year to date:
    • Site-wide: 1,153 out of 57,793
  • Since beginning of last month:
    • Site-wide: 2,833 out of 57,793

An Integrative Framework For Detecting Structural Variations In Cancer Genomes

genomics more details view paper
  • Downloaded 3,925 times
  • Download rankings, all-time:
    • Site-wide: 597 out of 57,793
    • In genomics: 162 out of 4,057
  • Year to date:
    • Site-wide: 13,690 out of 57,793
  • Since beginning of last month:
    • Site-wide: 23,278 out of 57,793

The 4D Nucleome Project

genomics more details view paper
  • Downloaded 2,887 times
  • Download rankings, all-time:
    • Site-wide: 1,069 out of 57,793
    • In genomics: 257 out of 4,057
  • Year to date:
    • Site-wide: 29,686 out of 57,793
  • Since beginning of last month:
    • Site-wide: 42,919 out of 57,793

Measuring the reproducibility and quality of Hi-C data

genomics more details view paper
  • Downloaded 2,414 times
  • Download rankings, all-time:
    • Site-wide: 1,486 out of 57,793
    • In genomics: 343 out of 4,057
  • Year to date:
    • Site-wide: 3,690 out of 57,793
  • Since beginning of last month:
    • Site-wide: 8,868 out of 57,793

Mitotic chromosomes fold by condensin-dependent helical winding of chromatin loop arrays

genomics more details view paper
  • Downloaded 2,373 times
  • Download rankings, all-time:
    • Site-wide: 1,534 out of 57,793
    • In genomics: 355 out of 4,057
  • Year to date:
    • Site-wide: 10,465 out of 57,793
  • Since beginning of last month:
    • Site-wide: 16,860 out of 57,793

Ultrastructural details of mammalian chromosome architecture

genomics more details view paper
  • Downloaded 2,004 times
  • Download rankings, all-time:
    • Site-wide: 2,043 out of 57,793
    • In genomics: 438 out of 4,057
  • Year to date:
    • Site-wide: 269 out of 57,793
  • Since beginning of last month:
    • Site-wide: 1,318 out of 57,793

Heterogeneity and Intrinsic Variation in Spatial Genome Organization

molecular biology more details view paper
  • Downloaded 1,949 times
  • Download rankings, all-time:
    • Site-wide: 2,159 out of 57,793
    • In molecular biology: 53 out of 1,772
  • Year to date:
    • Site-wide: 10,249 out of 57,793
  • Since beginning of last month:
    • Site-wide: 13,457 out of 57,793

C-BERST: Defining subnuclear proteomic landscapes at genomic elements with dCas9-APEX2

molecular biology more details view paper
  • Downloaded 1,933 times
  • Download rankings, all-time:
    • Site-wide: 2,183 out of 57,793
    • In molecular biology: 54 out of 1,772
  • Year to date:
    • Site-wide: 11,387 out of 57,793
  • Since beginning of last month:
    • Site-wide: 14,495 out of 57,793

CTCF sites display cell cycle dependent dynamics in factor binding and nucleosome positioning

genomics more details view paper
  • Downloaded 1,762 times
  • Download rankings, all-time:
    • Site-wide: 2,560 out of 57,793
    • In genomics: 524 out of 4,057
  • Year to date:
    • Site-wide: 3,746 out of 57,793
  • Since beginning of last month:
    • Site-wide: 10,897 out of 57,793

Single-cell chromatin interactions reveal regulatory hubs in dynamic compartmentalized domains

genetics more details view paper
  • Downloaded 1,465 times
  • Download rankings, all-time:
    • Site-wide: 3,478 out of 57,793
    • In genetics: 315 out of 3,318
  • Year to date:
    • Site-wide: 20,893 out of 57,793
  • Since beginning of last month:
    • Site-wide: 31,972 out of 57,793

Cohesin dependent compaction of mitotic chromosomes

genomics more details view paper
  • Downloaded 1,122 times
  • Download rankings, all-time:
    • Site-wide: 5,379 out of 57,793
    • In genomics: 920 out of 4,057
  • Year to date:
    • Site-wide: 33,073 out of 57,793
  • Since beginning of last month:
    • Site-wide: 30,878 out of 57,793

Compartment-dependent chromatin interaction dynamics revealed by liquid chromatin Hi-C

genomics more details view paper
  • Downloaded 1,108 times
  • Download rankings, all-time:
    • Site-wide: 5,505 out of 57,793
    • In genomics: 936 out of 4,057
  • Year to date:
    • Site-wide: 901 out of 57,793
  • Since beginning of last month:
    • Site-wide: 59 out of 57,793

Higher-Order Organization Principles of Pre-translational mRNPs

molecular biology more details view paper
  • Downloaded 1,061 times
  • Download rankings, all-time:
    • Site-wide: 5,927 out of 57,793
    • In molecular biology: 172 out of 1,772
  • Year to date:
    • Site-wide: 34,268 out of 57,793
  • Since beginning of last month:
    • Site-wide: 47,933 out of 57,793

The HoxD Cluster is a Dynamic and Resilient TAD Boundary Controling the Segregation of Antagonistic Regulatory Landscapes

developmental biology more details view paper
  • Downloaded 925 times
  • Download rankings, all-time:
    • Site-wide: 7,377 out of 57,793
    • In developmental biology: 154 out of 1,724
  • Year to date:
    • Site-wide: 34,830 out of 57,793
  • Since beginning of last month:
    • Site-wide: 23,095 out of 57,793

The genome-wide, multi-layered architecture of chromosome pairing in early Drosophila embryos

genetics more details view paper
  • Downloaded 911 times
  • Download rankings, all-time:
    • Site-wide: 7,565 out of 57,793
    • In genetics: 599 out of 3,318
  • Year to date:
    • Site-wide: 6,180 out of 57,793
  • Since beginning of last month:
    • Site-wide: 9,484 out of 57,793

The non-canonical SMC protein SmcHD1 antagonises TAD formation on the inactive X chromosome

molecular biology more details view paper
  • Downloaded 838 times
  • Download rankings, all-time:
    • Site-wide: 8,614 out of 57,793
    • In molecular biology: 255 out of 1,772
  • Year to date:
    • Site-wide: 25,747 out of 57,793
  • Since beginning of last month:
    • Site-wide: 22,842 out of 57,793

A chromosome folding intermediate at the condensin-to-cohesin transition during telophase

genomics more details view paper
  • Downloaded 782 times
  • Download rankings, all-time:
    • Site-wide: 9,589 out of 57,793
    • In genomics: 1,423 out of 4,057
  • Year to date:
    • Site-wide: 1,676 out of 57,793
  • Since beginning of last month:
    • Site-wide: 710 out of 57,793

Stag1 and Stag2 regulate cell fate decisions in hematopoiesis through non-redundant topological control

cell biology more details view paper
  • Downloaded 738 times
  • Download rankings, all-time:
    • Site-wide: 10,404 out of 57,793
    • In cell biology: 379 out of 2,743
  • Year to date:
    • Site-wide: 1,865 out of 57,793
  • Since beginning of last month:
    • Site-wide: 2,947 out of 57,793

Highly Structured Homolog Pairing Reflects Functional Organization of the Drosophila Genome

genetics more details view paper
  • Downloaded 689 times
  • Download rankings, all-time:
    • Site-wide: 11,481 out of 57,793
    • In genetics: 822 out of 3,318
  • Year to date:
    • Site-wide: 9,639 out of 57,793
  • Since beginning of last month:
    • Site-wide: 22,618 out of 57,793

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