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Author: Hong Xie

Rankings

  • All-time downloads: 30,033 (rank: 7,012 )
  • Categories:
    • epidemiology: 11,021 (rank: 1,600 (tie) )
    • genomics: 1,878 (rank: 14,516 (tie) )
    • infectious diseases: 2,721 (rank: 16,381 (tie) )
    • microbiology: 4,799 (rank: 3,668 (tie) )
    • neuroscience: 1,219 (rank: 24,797 (tie) )
    • psychiatry and clinical psychology: 176 (rank: 6,942 (tie) )
    • public and global health: 8,219 (rank: 701 (tie) )

Downloads per author, site-wide

Preprints

Cryptic transmission of SARS-CoV-2 in Washington State

epidemiology more details view paper
  • Downloaded 9,680 times
  • Download rankings, all-time:
    • Site-wide: 1,124
    • In epidemiology: 149
  • Year to date:
    • Site-wide: 9,853
  • Since beginning of last month:
    • Site-wide: 49,590

Coast-to-coast spread of SARS-CoV-2 in the United States revealed by genomic epidemiology

public and global health more details view paper
  • Downloaded 8,219 times
  • Download rankings, all-time:
    • Site-wide: 1,382
    • In public and global health: 57
  • Year to date:
    • Site-wide: 8,668
  • Since beginning of last month:
    • Site-wide: 28,604

In vivo antiviral host response to SARS-CoV-2 by viral load, sex, and age

microbiology more details view paper
  • Downloaded 2,061 times
  • Download rankings, all-time:
    • Site-wide: 9,446
    • In microbiology: 550
  • Year to date:
    • Site-wide: 20,960
  • Since beginning of last month:
    • Site-wide: 116,358

Associations between SARS-CoV-2 variants and risk of COVID-19 hospitalization among confirmed cases in Washington State: a retrospective cohort study

infectious diseases more details view paper
  • Downloaded 1,530 times
  • Download rankings, all-time:
    • Site-wide: 14,848
    • In infectious diseases: 1,763
  • Year to date:
    • Site-wide: 2,826
  • Since beginning of last month:
    • Site-wide: 317

SARS-CoV-2 ORF6 disrupts nucleocytoplasmic transport through interactions with Rae1 and Nup98

microbiology more details view paper
  • Downloaded 1,242 times
  • Download rankings, all-time:
    • Site-wide: 20,408
    • In microbiology: 1,189
  • Year to date:
    • Site-wide: 15,300
  • Since beginning of last month:
    • Site-wide: 67,967

Viral genomes reveal patterns of the SARS-CoV-2 outbreak in Washington State

epidemiology more details view paper
  • Downloaded 1,028 times
  • Download rankings, all-time:
    • Site-wide: 27,281
    • In epidemiology: 1,573
  • Year to date:
    • Site-wide: 23,585
  • Since beginning of last month:
    • Site-wide: 62,034

Identification of multiple large deletions in ORF7a resulting in in-frame gene fusions in clinical SARS-CoV-2 isolates

infectious diseases more details view paper
  • Downloaded 632 times
  • Download rankings, all-time:
    • Site-wide: 54,446
    • In infectious diseases: 3,438
  • Year to date:
    • Site-wide: 76,099
  • Since beginning of last month:
    • Site-wide: 97,115

Genomic and proteomic analysis of Human herpesvirus 6 reveals distinct clustering of acute versus inherited forms and reannotation of reference strain

microbiology more details view paper
  • Downloaded 536 times
  • Download rankings, all-time:
    • Site-wide: 67,034
    • In microbiology: 4,289
  • Year to date:
    • Site-wide: 153,825
  • Since beginning of last month:
    • Site-wide: 139,573

The impact of interspecies recombination on human herpes simplex virus evolution and host immune recognition

genomics more details view paper
  • Downloaded 511 times
  • Download rankings, all-time:
    • Site-wide: 70,912
    • In genomics: 4,872
  • Year to date:
    • Site-wide: 116,563
  • Since beginning of last month:
    • Site-wide: 109,747

Specific allelic discrimination of N501Y and other SARS-CoV-2 mutations by ddPCR detects B.1.1.7 lineage in Washington State

infectious diseases more details view paper
  • Downloaded 459 times
  • Download rankings, all-time:
    • Site-wide: 79,813
    • In infectious diseases: 4,124
  • Year to date:
    • Site-wide: 17,718
  • Since beginning of last month:
    • Site-wide: 58,337

Ultrasensitive capture of human herpes simplex virus genomes directly from clinical samples reveals extraordinarily limited evolution in cell culture

genomics more details view paper
  • Downloaded 420 times
  • Download rankings, all-time:
    • Site-wide: 87,385
    • In genomics: 5,576
  • Year to date:
    • Site-wide: 139,470
  • Since beginning of last month:
    • Site-wide: 134,487

Discrimination of the hierarchical structure of cortical layers in 2-photon microscopy data by combined unsupervised and supervised machine learning

neuroscience more details view paper
  • Downloaded 362 times
  • Download rankings, all-time:
    • Site-wide: 100,362
    • In neuroscience: 14,935
  • Year to date:
    • Site-wide: 152,511
  • Since beginning of last month:
    • Site-wide: 145,979

Copy number heterogeneity, large origin tandem repeats, and interspecies recombination in HHV-6A and HHV-6B reference strains

genomics more details view paper
  • Downloaded 337 times
  • Download rankings, all-time:
    • Site-wide: 106,457
    • In genomics: 6,287
  • Year to date:
    • Site-wide: 157,243
  • Since beginning of last month:
    • Site-wide: 155,612

Phylogenetic estimates of SARS-CoV-2 introductions into Washington State

epidemiology more details view paper
  • Downloaded 313 times
  • Download rankings, all-time:
    • Site-wide: 112,279
    • In epidemiology: 4,766
  • Year to date:
    • Site-wide: 31,592
  • Since beginning of last month:
    • Site-wide: 47,841

Sensitive detection of highly fragmented cytomegalovirus nucleic acid in human cfDNA

microbiology more details view paper
  • Downloaded 291 times
  • Download rankings, all-time:
    • Site-wide: 117,975
    • In microbiology: 8,417
  • Year to date:
    • Site-wide: 142,115
  • Since beginning of last month:
    • Site-wide: 118,912

Structural Covariance Networks in Post-Traumatic Stress Disorder: A Multisite ENIGMA-PGC Study

neuroscience more details view paper
  • Downloaded 281 times
  • Download rankings, all-time:
    • Site-wide: 120,811
    • In neuroscience: 18,121
  • Year to date:
    • Site-wide: 36,648
  • Since beginning of last month:
    • Site-wide: 34,872

Estimation of Full-Length TprK Diversity in Treponema pallidum subspecies pallidum

microbiology more details view paper
  • Downloaded 269 times
  • Download rankings, all-time:
    • Site-wide: 123,894
    • In microbiology: 8,948
  • Year to date:
    • Site-wide: 155,676
  • Since beginning of last month:
    • Site-wide: 162,298

Inherited chromosomally integrated HHV-6 demonstrates tissue-specific RNA expression in vivo that correlates with increased antibody immune response.

genomics more details view paper
  • Downloaded 257 times
  • Download rankings, all-time:
    • Site-wide: 127,044
    • In genomics: 6,955
  • Year to date:
    • Site-wide: 159,436
  • Since beginning of last month:
    • Site-wide: 141,594

Multimodal memory components and their long-term dynamics identified in cortical layers II/III but not layer Vb

neuroscience more details view paper
  • Downloaded 228 times
  • Download rankings, all-time:
    • Site-wide: 134,479
    • In neuroscience: 20,114
  • Year to date:
    • Site-wide: 163,884
  • Since beginning of last month:
    • Site-wide: 163,328

A Comparison of Methods to Harmonize Cortical Thickness Measurements Across Scanners and Sites

neuroscience more details view paper
  • Downloaded 206 times
  • Download rankings, all-time:
    • Site-wide: 140,096
    • In neuroscience: 20,889
  • Year to date:
    • Site-wide: 54,824
  • Since beginning of last month:
    • Site-wide: 13,507

Comparative Genomics and Full-Length TprK Profiling of Treponema pallidum subsp. pallidum Reinfection

microbiology more details view paper
  • Downloaded 204 times
  • Download rankings, all-time:
    • Site-wide: 140,589
    • In microbiology: 10,412
  • Year to date:
    • Site-wide: 163,012
  • Since beginning of last month:
    • Site-wide: 158,083

Genome sequencing of 196 Treponema pallidum strains from six continents reveals additional variability in vaccine candidate genes and dominance of Nichols clade strains in Madagascar

genomics more details view paper
  • Downloaded 181 times
  • Download rankings, all-time:
    • Site-wide: 145,855
    • In genomics: 7,517
  • Year to date:
    • Site-wide: 64,082
  • Since beginning of last month:
    • Site-wide: 97,673

Resolution limit-free community detection reveals unique patterns of resting-state network connectivity in posttraumatic stress disorder: A PGC-ENIGMA PTSD Consortium investigation

psychiatry and clinical psychology more details view paper
  • Downloaded 176 times
  • Download rankings, all-time:
    • Site-wide: 147,058
    • In psychiatry and clinical psychology: 860
  • Year to date:
    • Site-wide: 66,028
  • Since beginning of last month:
    • Site-wide: 42,547

Herpes Simplex Virus Mistyping due to HSV-1 x HSV-2 Interspecies Recombination in Viral Gene Encoding Glycoprotein B

genomics more details view paper
  • Downloaded 172 times
  • Download rankings, all-time:
    • Site-wide: 147,948
    • In genomics: 7,568
  • Year to date:
    • Site-wide: 154,665
  • Since beginning of last month:
    • Site-wide: 149,686

Single Image-based Vignetting Correction for Improving the Consistency of Neural Activity Analysis in 2-Photon Functional Microscopy

neuroscience more details view paper
  • Downloaded 142 times
  • Download rankings, all-time:
    • Site-wide: 153,555
    • In neuroscience: 22,854
  • Year to date:
    • Site-wide: 83,298
  • Since beginning of last month:
    • Site-wide: 108,516

In vivo generation of BK and JC polyomavirus defective viral genomes in human urine samples associated with higher viral loads

microbiology more details view paper
  • Downloaded 124 times
  • Download rankings, all-time:
    • Site-wide: 156,336
    • In microbiology: 11,950
  • Year to date:
    • Site-wide: 94,687
  • Since beginning of last month:
    • Site-wide: 97,568

Clinical performance characteristics of the Swift Normalase Amplicon Panel for sensitive recovery of SARS-CoV-2 genomes

infectious diseases more details view paper
  • Downloaded 100 times
  • Download rankings, all-time:
    • Site-wide: 159,374
    • In infectious diseases: 6,417
  • Year to date:
    • Site-wide: 113,109
  • Since beginning of last month:
    • Site-wide: 14,407

Longitudinal accumulation of in vivo and in vitro-grown Treponema pallidum subsp. pallidum TprK variants in the presence and absence of immune pressure

microbiology more details view paper
  • Downloaded 72 times
  • Download rankings, all-time:
    • Site-wide: 162,045
    • In microbiology: 12,493
  • Year to date:
    • Site-wide: 137,316
  • Since beginning of last month:
    • Site-wide: 128,887

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