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Author: Pekka Marttinen

Rankings

  • All-time downloads: 11,566 (rank: 22,251 (tie) )
  • Categories:
    • bioinformatics: 6,069 (rank: 2,327 )
    • genetics: 1,333 (rank: 14,484 (tie) )
    • genomics: 2,709 (rank: 10,194 (tie) )
    • infectious diseases: 259 (rank: 51,643 (tie) )
    • microbiology: 1,196 (rank: 15,794 (tie) )

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Preprints

Sequence element enrichment analysis to determine the genetic basis of bacterial phenotypes

genomics more details view paper
  • Downloaded 2,210 times
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    • Site-wide: 8,636
    • In genomics: 860
  • Year to date:
    • Site-wide: 115,219
  • Since beginning of last month:
    • Site-wide: 103,451

Efficient inference of recent and ancestral recombination within bacterial populations

bioinformatics more details view paper
  • Downloaded 1,953 times
  • Download rankings, all-time:
    • Site-wide: 10,359
    • In bioinformatics: 1,175
  • Year to date:
    • Site-wide: 81,281
  • Since beginning of last month:
    • Site-wide: 133,448

metaCCA: Summary statistics-based multivariate meta-analysis of genome-wide association studies using canonical correlation analysis

bioinformatics more details view paper
  • Downloaded 1,636 times
  • Download rankings, all-time:
    • Site-wide: 13,490
    • In bioinformatics: 1,507
  • Year to date:
    • Site-wide: 137,925
  • Since beginning of last month:
    • Site-wide: 161,268

Gene-Gene Interaction Detection with Deep Learning

bioinformatics more details view paper
  • Downloaded 905 times
  • Download rankings, all-time:
    • Site-wide: 33,186
    • In bioinformatics: 3,616
  • Year to date:
    • Site-wide: 6,368
  • Since beginning of last month:
    • Site-wide: 20,809

The impact of host metapopulation structure on the population genetics of colonizing bacteria

genetics more details view paper
  • Downloaded 771 times
  • Download rankings, all-time:
    • Site-wide: 41,803
    • In genetics: 1,805
  • Year to date:
    • Site-wide: 133,811
  • Since beginning of last month:
    • Site-wide: 124,646

Modelling G×E with historical weather information improves genomic prediction in new environments

bioinformatics more details view paper
  • Downloaded 746 times
  • Download rankings, all-time:
    • Site-wide: 43,789
    • In bioinformatics: 4,592
  • Year to date:
    • Site-wide: 89,003
  • Since beginning of last month:
    • Site-wide: 34,582

biMM: Efficient estimation of genetic variances and covariances for cohorts with high-dimensional phenotype measurements

genetics more details view paper
  • Downloaded 562 times
  • Download rankings, all-time:
    • Site-wide: 63,828
    • In genetics: 2,699
  • Year to date:
    • Site-wide: 163,139
  • Since beginning of last month:
    • Site-wide: 164,909

Bacmeta: simulation for genomic evolution in bacterial metapopulations

genomics more details view paper
  • Downloaded 499 times
  • Download rankings, all-time:
    • Site-wide: 73,427
    • In genomics: 4,971
  • Year to date:
    • Site-wide: 162,837
  • Since beginning of last month:
    • Site-wide: 155,008

Speciation trajectories in recombining bacterial species

microbiology more details view paper
  • Downloaded 412 times
  • Download rankings, all-time:
    • Site-wide: 89,928
    • In microbiology: 6,090
  • Year to date:
    • Site-wide: 164,552
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    • Site-wide: 160,284

A non-adaptive demographic mechanism for genome expansion in Streptomyces

microbiology more details view paper
  • Downloaded 404 times
  • Download rankings, all-time:
    • Site-wide: 91,744
    • In microbiology: 6,231
  • Year to date:
    • Site-wide: 22,362
  • Since beginning of last month:
    • Site-wide: 16,013

A Bayesian model of acquisition and clearance of bacterial colonization incorporating within-host variation

bioinformatics more details view paper
  • Downloaded 387 times
  • Download rankings, all-time:
    • Site-wide: 95,493
    • In bioinformatics: 8,313
  • Year to date:
    • Site-wide: 154,702
  • Since beginning of last month:
    • Site-wide: 120,370

Population analysis of Legionella pneumophila reveals the basis of resistance to complement-mediated killing

microbiology more details view paper
  • Downloaded 380 times
  • Download rankings, all-time:
    • Site-wide: 97,074
    • In microbiology: 6,691
  • Year to date:
    • Site-wide: 55,817
  • Since beginning of last month:
    • Site-wide: 54,160

Modeling MRSA decolonization: Interactions between body sites and the impact of site-specific clearance

infectious diseases more details view paper
  • Downloaded 259 times
  • Download rankings, all-time:
    • Site-wide: 127,505
    • In infectious diseases: 5,481
  • Year to date:
    • Site-wide: 50,042
  • Since beginning of last month:
    • Site-wide: 77,777

Crop loss identification at field parcel scale using satellite remote sensing and machine learning

bioinformatics more details view paper
  • Downloaded 234 times
  • Download rankings, all-time:
    • Site-wide: 134,215
    • In bioinformatics: 10,583
  • Year to date:
    • Site-wide: 48,262
  • Since beginning of last month:
    • Site-wide: 21,317

Improving Neural Networks for Genotype-Phenotype Prediction Using Published Summary Statistics

bioinformatics more details view paper
  • Downloaded 208 times
  • Download rankings, all-time:
    • Site-wide: 140,641
    • In bioinformatics: 10,965
  • Year to date:
    • Site-wide: 55,907
  • Since beginning of last month:
    • Site-wide: 5,371

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