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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 57,915 bioRxiv papers from 266,490 authors.

Author: Itoshi Nikaido

Rankings

  • All-time downloads: 16,024 (rank: 1,608 out of 266,490)
  • Categories:
    • bioinformatics: 6,549 (rank: 576 out of 23,182)
    • genomics: 9,475 (rank: 1,009 (tie) out of 30,388)

Downloads per author, site-wide

Preprints

Genome-wide analysis of transcriptional bursting-induced noise in mammalian cells

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No bioRxiv download data for this paper yet.

Benchmarking Single-Cell RNA Sequencing Protocols for Cell Atlas Projects

genomics more details view paper
  • Downloaded 6,497 times
  • Download rankings, all-time:
    • Site-wide: 227 out of 57,915
    • In genomics: 64 out of 4,058
  • Year to date:
    • Site-wide: 33 out of 57,915
  • Since beginning of last month:
    • Site-wide: 32 out of 57,915

Quartz-Seq2: a high-throughput single-cell RNA-sequencing method that effectively uses limited sequence reads

genomics more details view paper
  • Downloaded 2,978 times
  • Download rankings, all-time:
    • Site-wide: 1,004 out of 57,915
    • In genomics: 248 out of 4,058
  • Year to date:
    • Site-wide: 10,614 out of 57,915
  • Since beginning of last month:
    • Site-wide: 9,719 out of 57,915

SCODE: An efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiation

bioinformatics more details view paper
  • Downloaded 1,634 times
  • Download rankings, all-time:
    • Site-wide: 2,921 out of 57,915
    • In bioinformatics: 590 out of 5,899
  • Year to date:
    • Site-wide: 40,596 out of 57,915
  • Since beginning of last month:
    • Site-wide: 46,849 out of 57,915

Uncovering hypergraphs of cell-cell interaction from single cell RNA-sequencing data

bioinformatics more details view paper
  • Downloaded 1,363 times
  • Download rankings, all-time:
    • Site-wide: 3,948 out of 57,915
    • In bioinformatics: 788 out of 5,899
  • Year to date:
    • Site-wide: 612 out of 57,915
  • Since beginning of last month:
    • Site-wide: 1,248 out of 57,915

CellFishing.jl: an ultrafast and scalable cell search method for single-cell RNA-sequencing

bioinformatics more details view paper
  • Downloaded 1,191 times
  • Download rankings, all-time:
    • Site-wide: 4,894 out of 57,915
    • In bioinformatics: 960 out of 5,899
  • Year to date:
    • Site-wide: 8,742 out of 57,915
  • Since beginning of last month:
    • Site-wide: 15,042 out of 57,915

Benchmarking principal component analysis for large-scale single-cell RNA-sequencing

bioinformatics more details view paper
  • Downloaded 992 times
  • Download rankings, all-time:
    • Site-wide: 6,629 out of 57,915
    • In bioinformatics: 1,212 out of 5,899
  • Year to date:
    • Site-wide: 1,132 out of 57,915
  • Since beginning of last month:
    • Site-wide: 2,446 out of 57,915

Millefy: visualizing cell-to-cell heterogeneity in read coverage of single-cell RNA sequencing datasets

bioinformatics more details view paper
  • Downloaded 491 times
  • Download rankings, all-time:
    • Site-wide: 18,053 out of 57,915
    • In bioinformatics: 2,718 out of 5,899
  • Year to date:
    • Site-wide: 3,822 out of 57,915
  • Since beginning of last month:
    • Site-wide: 7,844 out of 57,915

An efficient gene regulatory network inference algorithm for early Drosophila melanogaster embryogenesis

bioinformatics more details view paper
  • Downloaded 446 times
  • Download rankings, all-time:
    • Site-wide: 20,193 out of 57,915
    • In bioinformatics: 2,971 out of 5,899
  • Year to date:
    • Site-wide: 40,464 out of 57,915
  • Since beginning of last month:
    • Site-wide: 38,346 out of 57,915

A NMF-based approach to discover overlooked differentially expressed gene regions from single-cell RNA-seq data

bioinformatics more details view paper
  • Downloaded 432 times
  • Download rankings, all-time:
    • Site-wide: 20,994 out of 57,915
    • In bioinformatics: 3,047 out of 5,899
  • Year to date:
    • Site-wide: 4,695 out of 57,915
  • Since beginning of last month:
    • Site-wide: 17,547 out of 57,915

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