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Author: Manja Marz

Rankings

  • All-time downloads: 15,095 (rank: 5,271 out of 425,626)
  • Categories:
    • bioinformatics: 4,325 (rank: 2,397 out of 36,133)
    • genomics: 8,660 (rank: 1,881 out of 44,423)
    • microbiology: 664 (rank: 15,512 (tie) out of 50,319)
    • molecular biology: 338 (rank: 13,352 (tie) out of 23,380)
    • neuroscience: 1,108 (rank: 16,408 (tie) out of 71,945)

Downloads per author, site-wide

Preprints

Computational Pan-Genomics: Status, Promises and Challenges

genomics more details view paper
  • Downloaded 4,458 times
  • Download rankings, all-time:
    • Site-wide: 1,061 out of 100,745
    • In genomics: 210 out of 6,246
  • Year to date:
    • Site-wide: 13,888 out of 100,745
  • Since beginning of last month:
    • Site-wide: 8,614 out of 100,745

Direct RNA nanopore sequencing of full-length coronavirus genomes provides novel insights into structural variants and enables modification analysis

genomics more details view paper
  • Downloaded 3,695 times
  • Download rankings, all-time:
    • Site-wide: 1,468 out of 100,745
    • In genomics: 301 out of 6,246
  • Year to date:
    • Site-wide: 2,262 out of 100,745
  • Since beginning of last month:
    • Site-wide: 6,860 out of 100,745

VIDHOP, viral host prediction with Deep Learning

bioinformatics more details view paper
  • Downloaded 2,317 times
  • Download rankings, all-time:
    • Site-wide: 3,252 out of 100,745
    • In bioinformatics: 569 out of 9,252
  • Year to date:
    • Site-wide: 2,220 out of 100,745
  • Since beginning of last month:
    • Site-wide: 9,428 out of 100,745

Peripheral blood exosomes pass blood-brain-barrier and induce glial cell activation

neuroscience more details view paper
  • Downloaded 1,108 times
  • Download rankings, all-time:
    • Site-wide: 11,175 out of 100,745
    • In neuroscience: 1,722 out of 17,945
  • Year to date:
    • Site-wide: 22,850 out of 100,745
  • Since beginning of last month:
    • Site-wide: None out of 100,745

Inclusion of Oxford Nanopore long reads improves all microbial and phage metagenome-assembled genomes from a complex aquifer system

microbiology more details view paper
  • Downloaded 664 times
  • Download rankings, all-time:
    • Site-wide: 24,772 out of 100,745
    • In microbiology: 1,642 out of 8,937
  • Year to date:
    • Site-wide: 7,489 out of 100,745
  • Since beginning of last month:
    • Site-wide: None out of 100,745

The landscape of the alternatively spliced transcriptome remains stable during aging across different species and tissues

bioinformatics more details view paper
  • Downloaded 608 times
  • Download rankings, all-time:
    • Site-wide: 27,974 out of 100,745
    • In bioinformatics: 3,753 out of 9,252
  • Year to date:
    • Site-wide: 30,687 out of 100,745
  • Since beginning of last month:
    • Site-wide: 23,509 out of 100,745

A miRNA catalogue and ncRNA annotation of the short-living fish Nothobranchius furzeri

genomics more details view paper
  • Downloaded 507 times
  • Download rankings, all-time:
    • Site-wide: 35,346 out of 100,745
    • In genomics: 3,410 out of 6,246
  • Year to date:
    • Site-wide: 89,900 out of 100,745
  • Since beginning of last month:
    • Site-wide: None out of 100,745

EpiDope: A Deep neural network for linear B-cell epitope prediction

bioinformatics more details view paper
  • Downloaded 408 times
  • Download rankings, all-time:
    • Site-wide: 45,365 out of 100,745
    • In bioinformatics: 5,371 out of 9,252
  • Year to date:
    • Site-wide: 9,896 out of 100,745
  • Since beginning of last month:
    • Site-wide: 6,453 out of 100,745

A comprehensive annotation and differential expression analysis of short and long non-coding RNAs in 16 bat genomes

bioinformatics more details view paper
  • Downloaded 401 times
  • Download rankings, all-time:
    • Site-wide: 46,249 out of 100,745
    • In bioinformatics: 5,448 out of 9,252
  • Year to date:
    • Site-wide: 31,923 out of 100,745
  • Since beginning of last month:
    • Site-wide: 38,786 out of 100,745

SilentMutations (SIM): a tool for analyzing long-range RNA-RNA interactions in viral genomes and structured RNAs

bioinformatics more details view paper
  • Downloaded 342 times
  • Download rankings, all-time:
    • Site-wide: 54,032 out of 100,745
    • In bioinformatics: 6,077 out of 9,252
  • Year to date:
    • Site-wide: 60,944 out of 100,745
  • Since beginning of last month:
    • Site-wide: 50,175 out of 100,745

Identification of miRNAs and associated pathways regulated by Leukemia Inhibitory Factor in trophoblastic cell lines

molecular biology more details view paper
  • Downloaded 338 times
  • Download rankings, all-time:
    • Site-wide: 54,574 out of 100,745
    • In molecular biology: 1,811 out of 3,497
  • Year to date:
    • Site-wide: 49,732 out of 100,745
  • Since beginning of last month:
    • Site-wide: 42,932 out of 100,745

PoSeiDon: a Nextflow pipeline for the detection of evolutionary recombination events and positive selection

bioinformatics more details view paper
  • Downloaded 249 times
  • Download rankings, all-time:
    • Site-wide: 68,824 out of 100,745
    • In bioinformatics: 7,153 out of 9,252
  • Year to date:
    • Site-wide: 20,527 out of 100,745
  • Since beginning of last month:
    • Site-wide: 22,802 out of 100,745

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News

  • 20 Oct 2020: Support for sorting preprints using Twitter activity has been removed, at least temporarily, until a new source of social media activity data becomes available.
  • 18 Dec 2019: We're pleased to announce PanLingua, a new tool that enables you to search for machine-translated bioRxiv preprints using more than 100 different languages.
  • 21 May 2019: PLOS Biology has published a community page about Rxivist.org and its design.
  • 10 May 2019: The paper analyzing the Rxivist dataset has been published at eLife.
  • 1 Mar 2019: We now have summary statistics about bioRxiv downloads and submissions.
  • 8 Feb 2019: Data from Altmetric is now available on the Rxivist details page for every preprint. Look for the "donut" under the download metrics.
  • 30 Jan 2019: preLights has featured the Rxivist preprint and written about our findings.
  • 22 Jan 2019: Nature just published an article about Rxivist and our data.
  • 13 Jan 2019: The Rxivist preprint is live!