Rxivist logo

Author: Philippa Matthews

Rankings

  • All-time downloads: 251,383 (rank: 168 )
  • Categories:
    • bioinformatics: 2,194 (rank: 7,380 (tie) )
    • epidemiology: 13,774 (rank: 1,120 )
    • evolutionary biology: 105 (rank: 25,578 (tie) )
    • gastroenterology: 488 (rank: 756 (tie) )
    • genomics: 1,241 (rank: 20,043 (tie) )
    • health informatics: 397 (rank: 2,153 (tie) )
    • hiv aids: 1,450 (rank: 99 (tie) )
    • infectious diseases: 202,749 (rank: 89 )
    • microbiology: 4,825 (rank: 3,356 )
    • primary care research: 23,718 (rank: 7 (tie) )
    • public and global health: 442 (rank: 7,464 (tie) )

Downloads per author, site-wide

Preprints

Evaluation of antibody testing for SARS-Cov-2 using ELISA and lateral flow immunoassays

infectious diseases more details view paper
  • Downloaded 115,091 times
  • Download rankings, all-time:
    • Site-wide: 40
    • In infectious diseases: 17
  • Year to date:
    • Site-wide: 43
  • Since beginning of last month:
    • Site-wide: 1,654

Inhaled budesonide in the treatment of early COVID-19 illness: a randomised controlled trial

primary care research more details view paper
  • Downloaded 23,718 times
  • Download rankings, all-time:
    • Site-wide: 334
    • In primary care research: 1
  • Year to date:
    • Site-wide: 71
  • Since beginning of last month:
    • Site-wide: 9,035

Impact of vaccination on new SARS-CoV-2 infections in the United Kingdom

infectious diseases more details view paper
  • Downloaded 16,342 times
  • Download rankings, all-time:
    • Site-wide: 496
    • In infectious diseases: 175
  • Year to date:
    • Site-wide: 108
  • Since beginning of last month:
    • Site-wide: 4,115

The impact of SARS-CoV-2 vaccines on antibody responses in the general population in the United Kingdom

infectious diseases more details view paper
  • Downloaded 14,815 times
  • Download rankings, all-time:
    • Site-wide: 564
    • In infectious diseases: 201
  • Year to date:
    • Site-wide: 130
  • Since beginning of last month:
    • Site-wide: 549

Virus detection and identification in minutes using single-particle imaging and deep learning

infectious diseases more details view paper
  • Downloaded 10,872 times
  • Download rankings, all-time:
    • Site-wide: 862
    • In infectious diseases: 273
  • Year to date:
    • Site-wide: 2,774
  • Since beginning of last month:
    • Site-wide: 30,451

Antibodies to SARS-CoV-2 are associated with protection against reinfection

infectious diseases more details view paper
  • Downloaded 10,433 times
  • Download rankings, all-time:
    • Site-wide: 919
    • In infectious diseases: 287
  • Year to date:
    • Site-wide: 946
  • Since beginning of last month:
    • Site-wide: 46,641

Impact of Delta on viral burden and vaccine effectiveness against new SARS-CoV-2 infections in the UK

epidemiology more details view paper
  • Downloaded 9,030 times
  • Download rankings, all-time:
    • Site-wide: 1,088
    • In epidemiology: 140
  • Year to date:
    • Site-wide: 228
  • Since beginning of last month:
    • Site-wide: 14

Ct threshold values, a proxy for viral load in community SARS-CoV-2 cases, demonstrate wide variation across populations and over time

infectious diseases more details view paper
  • Downloaded 5,397 times
  • Download rankings, all-time:
    • Site-wide: 2,140
    • In infectious diseases: 532
  • Year to date:
    • Site-wide: 615
  • Since beginning of last month:
    • Site-wide: 26,750

Differential occupational risks to healthcare workers from SARS-CoV-2: A prospective observational study

infectious diseases more details view paper
  • Downloaded 4,634 times
  • Download rankings, all-time:
    • Site-wide: 2,645
    • In infectious diseases: 608
  • Year to date:
    • Site-wide: 7,244
  • Since beginning of last month:
    • Site-wide: 4,390

An observational cohort study on the incidence of SARS-CoV-2 infection and B.1.1.7 variant infection in healthcare workers by antibody and vaccination status

infectious diseases more details view paper
  • Downloaded 3,494 times
  • Download rankings, all-time:
    • Site-wide: 3,922
    • In infectious diseases: 776
  • Year to date:
    • Site-wide: 631
  • Since beginning of last month:
    • Site-wide: 172

T cell assays differentiate clinical and subclinical SARS-CoV-2 infections from cross-reactive antiviral responses

infectious diseases more details view paper
  • Downloaded 3,161 times
  • Download rankings, all-time:
    • Site-wide: 4,562
    • In infectious diseases: 863
  • Year to date:
    • Site-wide: 4,040
  • Since beginning of last month:
    • Site-wide: 2,585

Diagnosis of SARS-CoV-2 infection with LamPORE, a high-throughput platform combining loop-mediated isothermal amplification and nanopore sequencing

infectious diseases more details view paper
  • Downloaded 2,972 times
  • Download rankings, all-time:
    • Site-wide: 4,929
    • In infectious diseases: 909
  • Year to date:
    • Site-wide: 5,788
  • Since beginning of last month:
    • Site-wide: 12,627

A systematic review of Hepatitis B virus (HBV) drug and vaccine escape mutations in Africa: a call for urgent action

epidemiology more details view paper
  • Downloaded 2,876 times
  • Download rankings, all-time:
    • Site-wide: 5,163
    • In epidemiology: 479
  • Year to date:
    • Site-wide: 17,311
  • Since beginning of last month:
    • Site-wide: 72,334

Quantitative SARS-CoV-2 anti-spike responses to Pfizer-BioNTech and Oxford-AstraZeneca vaccines by previous infection status

infectious diseases more details view paper
  • Downloaded 2,852 times
  • Download rankings, all-time:
    • Site-wide: 5,244
    • In infectious diseases: 946
  • Year to date:
    • Site-wide: 809
  • Since beginning of last month:
    • Site-wide: 183

SARS-CoV-2 RNA detected in blood samples from patients with COVID-19 is not associated with infectious virus

infectious diseases more details view paper
  • Downloaded 2,556 times
  • Download rankings, all-time:
    • Site-wide: 6,160
    • In infectious diseases: 1,038
  • Year to date:
    • Site-wide: 6,910
  • Since beginning of last month:
    • Site-wide: 63,425

Detection of viral pathogens with multiplex Nanopore MinION sequencing: be careful with cross-talk

bioinformatics more details view paper
  • Downloaded 2,194 times
  • Download rankings, all-time:
    • Site-wide: 7,694
    • In bioinformatics: 868
  • Year to date:
    • Site-wide: 110,145
  • Since beginning of last month:
    • Site-wide: 109,720

The duration, dynamics and determinants of SARS-CoV-2 antibody responses in individual healthcare workers

infectious diseases more details view paper
  • Downloaded 1,616 times
  • Download rankings, all-time:
    • Site-wide: 12,080
    • In infectious diseases: 1,510
  • Year to date:
    • Site-wide: 10,734
  • Since beginning of last month:
    • Site-wide: 100,326

Risk of adverse COVID-19 outcomes for people living with HIV: a rapid review and meta-analysis

hiv aids more details view paper
  • Downloaded 1,450 times
  • Download rankings, all-time:
    • Site-wide: 14,189
    • In hiv aids: 8
  • Year to date:
    • Site-wide: 3,300
  • Since beginning of last month:
    • Site-wide: 3,490

Human Herpes Virus 6 (HHV-6) - Pathogen or Passenger? A pilot study of clinical laboratory data and next generation sequencing

microbiology more details view paper
  • Downloaded 1,393 times
  • Download rankings, all-time:
    • Site-wide: 15,088
    • In microbiology: 882
  • Year to date:
    • Site-wide: 52,791
  • Since beginning of last month:
    • Site-wide: 77,130

Stringent thresholds for SARS-CoV-2 IgG assays result in under-detection of cases reporting loss of taste/smell

infectious diseases more details view paper
  • Downloaded 1,365 times
  • Download rankings, all-time:
    • Site-wide: 15,561
    • In infectious diseases: 1,710
  • Year to date:
    • Site-wide: 17,932
  • Since beginning of last month:
    • Site-wide: 25,214

Metagenomic Nanopore sequencing of influenza virus direct from clinical respiratory samples

microbiology more details view paper
  • Downloaded 1,345 times
  • Download rankings, all-time:
    • Site-wide: 15,898
    • In microbiology: 923
  • Year to date:
    • Site-wide: 112,945
  • Since beginning of last month:
    • Site-wide: 121,162

Fatal COVID-19 outcomes are associated with an antibody response targeting epitopes shared with endemic coronaviruses

infectious diseases more details view paper
  • Downloaded 1,319 times
  • Download rankings, all-time:
    • Site-wide: 16,402
    • In infectious diseases: 1,753
  • Year to date:
    • Site-wide: 2,224
  • Since beginning of last month:
    • Site-wide: 67,943

Illumina and Nanopore methods for whole genome sequencing of hepatitis B virus (HBV)

genomics more details view paper
  • Downloaded 1,241 times
  • Download rankings, all-time:
    • Site-wide: 17,900
    • In genomics: 1,738
  • Year to date:
    • Site-wide: 35,974
  • Since beginning of last month:
    • Site-wide: 32,375

A haemagglutination test for rapid detection of antibodies to SARS-CoV-2

infectious diseases more details view paper
  • Downloaded 1,166 times
  • Download rankings, all-time:
    • Site-wide: 19,634
    • In infectious diseases: 1,905
  • Year to date:
    • Site-wide: 6,960
  • Since beginning of last month:
    • Site-wide: 50,150

Hepatitis B virus resistance to tenofovir: fact or fiction? A synthesis of the evidence to date

infectious diseases more details view paper
  • Downloaded 871 times
  • Download rankings, all-time:
    • Site-wide: 30,004
    • In infectious diseases: 2,374
  • Year to date:
    • Site-wide: 20,510
  • Since beginning of last month:
    • Site-wide: 5,371

HBV vaccination and PMTCT as elimination tools in the presence of HIV: insights from a clinical cohort and dynamic model

microbiology more details view paper
  • Downloaded 818 times
  • Download rankings, all-time:
    • Site-wide: 32,730
    • In microbiology: 1,954
  • Year to date:
    • Site-wide: 93,543
  • Since beginning of last month:
    • Site-wide: None

Streptococcus intermedius as a leading agent of brain abscess: retrospective analysis of a UK cohort

infectious diseases more details view paper
  • Downloaded 816 times
  • Download rankings, all-time:
    • Site-wide: 32,861
    • In infectious diseases: 2,475
  • Year to date:
    • Site-wide: 18,734
  • Since beginning of last month:
    • Site-wide: 3,551

Hepatitis C Virus (HCV) diagnosis, epidemiology and access to treatment in a UK cohort

epidemiology more details view paper
  • Downloaded 804 times
  • Download rankings, all-time:
    • Site-wide: 33,572
    • In epidemiology: 1,737
  • Year to date:
    • Site-wide: 128,111
  • Since beginning of last month:
    • Site-wide: 32,531

Estimation of hepatitis B virus cccDNA persistence in chronic infection using within-host evolutionary rates

infectious diseases more details view paper
  • Downloaded 492 times
  • Download rankings, all-time:
    • Site-wide: 62,886
    • In infectious diseases: 3,409
  • Year to date:
    • Site-wide: 56,362
  • Since beginning of last month:
    • Site-wide: 67,132

Liver function tests and fibrosis scores in a rural population in Africa: estimation of the burden of disease and associated risk factors

gastroenterology more details view paper
  • Downloaded 488 times
  • Download rankings, all-time:
    • Site-wide: 63,412
    • In gastroenterology: 60
  • Year to date:
    • Site-wide: 64,266
  • Since beginning of last month:
    • Site-wide: 41,351

Anti-spike antibody response to natural SARS-CoV-2 infection in the general population

infectious diseases more details view paper
  • Downloaded 446 times
  • Download rankings, all-time:
    • Site-wide: 69,765
    • In infectious diseases: 3,588
  • Year to date:
    • Site-wide: 10,530
  • Since beginning of last month:
    • Site-wide: 51,888

The sensitivity improved two-test algorithm "SIT2": a universal optimization strategy for SARS-CoV-2 serology

infectious diseases more details view paper
  • Downloaded 443 times
  • Download rankings, all-time:
    • Site-wide: 70,258
    • In infectious diseases: 3,600
  • Year to date:
    • Site-wide: 33,027
  • Since beginning of last month:
    • Site-wide: 26,508

A study of knowledge, experience and beliefs about hepatitis B virus (HBV) infection in south western Uganda

public and global health more details view paper
  • Downloaded 442 times
  • Download rankings, all-time:
    • Site-wide: 70,458
    • In public and global health: 967
  • Year to date:
    • Site-wide: 68,482
  • Since beginning of last month:
    • Site-wide: 14,112

National Institute for Health Research Health Informatics Collaborative (NIHR HIC): Development of a Pipeline to Collate Electronic Clinical Data for Viral Hepatitis Research

health informatics more details view paper
  • Downloaded 397 times
  • Download rankings, all-time:
    • Site-wide: 78,255
    • In health informatics: 296
  • Year to date:
    • Site-wide: 82,617
  • Since beginning of last month:
    • Site-wide: 40,318

HBV seroepidemiology data for Africa provides insights into transmission and prevention

epidemiology more details view paper
  • Downloaded 365 times
  • Download rankings, all-time:
    • Site-wide: 84,513
    • In epidemiology: 3,578
  • Year to date:
    • Site-wide: 133,087
  • Since beginning of last month:
    • Site-wide: 120,353

Analysis of genomic-length HBV sequences to determine genotype and subgenotype reference sequences

microbiology more details view paper
  • Downloaded 355 times
  • Download rankings, all-time:
    • Site-wide: 86,468
    • In microbiology: 5,969
  • Year to date:
    • Site-wide: 100,282
  • Since beginning of last month:
    • Site-wide: 106,197

Bimodal distribution and set point HBV DNA viral loads in chronic infection: retrospective analysis of cohorts from the UK and South Africa

infectious diseases more details view paper
  • Downloaded 349 times
  • Download rankings, all-time:
    • Site-wide: 87,733
    • In infectious diseases: 4,033
  • Year to date:
    • Site-wide: 89,749
  • Since beginning of last month:
    • Site-wide: None

Data from an electronic health informatics pipeline to describe clearance dynamics of Hepatitis B surface antigen (HBsAg) and e-Antigen (HBeAg) in chronic HBV infection

microbiology more details view paper
  • Downloaded 333 times
  • Download rankings, all-time:
    • Site-wide: 91,122
    • In microbiology: 6,376
  • Year to date:
    • Site-wide: 105,263
  • Since beginning of last month:
    • Site-wide: 114,965

Treatment advantage in HBV/HIV coinfection compared to HBV monoinfection in a South African cohort

infectious diseases more details view paper
  • Downloaded 318 times
  • Download rankings, all-time:
    • Site-wide: 94,554
    • In infectious diseases: 4,216
  • Year to date:
    • Site-wide: 97,208
  • Since beginning of last month:
    • Site-wide: None

Nanopore metagenomic sequencing of full length human metapneumovirus (HMPV) within a unique sub-lineage

microbiology more details view paper
  • Downloaded 313 times
  • Download rankings, all-time:
    • Site-wide: 95,805
    • In microbiology: 6,768
  • Year to date:
    • Site-wide: 126,421
  • Since beginning of last month:
    • Site-wide: 114,996

Longitudinal analysis of the utility of liver biochemistry in hospitalised COVID-19 patients as prognostic markers

epidemiology more details view paper
  • Downloaded 295 times
  • Download rankings, all-time:
    • Site-wide: 99,848
    • In epidemiology: 4,203
  • Year to date:
    • Site-wide: 55,849
  • Since beginning of last month:
    • Site-wide: 100,140

Risk of reactivation of hepatitis B virus (HBV) and tuberculosis (TB) and complications of hepatitis C virus (HCV) following Tocilizumab therapy: A systematic review to inform risk assessment in the COVID era

infectious diseases more details view paper
  • Downloaded 271 times
  • Download rankings, all-time:
    • Site-wide: 105,471
    • In infectious diseases: 4,508
  • Year to date:
    • Site-wide: 21,319
  • Since beginning of last month:
    • Site-wide: 5,229

Hepatitis B Virus Infection as a Neglected Tropical Disease

microbiology more details view paper
  • Downloaded 268 times
  • Download rankings, all-time:
    • Site-wide: 106,277
    • In microbiology: 7,618
  • Year to date:
    • Site-wide: 151,436
  • Since beginning of last month:
    • Site-wide: None

Endemic hepatitis B virus (HBV) among hospital in-patients in Bangladesh, including evidence of occult infection

infectious diseases more details view paper
  • Downloaded 214 times
  • Download rankings, all-time:
    • Site-wide: 119,603
    • In infectious diseases: 4,875
  • Year to date:
    • Site-wide: 94,311
  • Since beginning of last month:
    • Site-wide: 99,410

Evidence of Tenofovir Resistance in Chronic Hepatitis B Virus (HBV) Infection: An Observational Case Series of South African Adults

infectious diseases more details view paper
  • Downloaded 213 times
  • Download rankings, all-time:
    • Site-wide: 119,842
    • In infectious diseases: 4,885
  • Year to date:
    • Site-wide: 85,156
  • Since beginning of last month:
    • Site-wide: 10,911

Modelling cost-effectiveness of tenofovir for prevention of mother to child transmission of hepatitis B virus infection in South Africa

epidemiology more details view paper
  • Downloaded 209 times
  • Download rankings, all-time:
    • Site-wide: 120,848
    • In epidemiology: 5,073
  • Year to date:
    • Site-wide: 148,675
  • Since beginning of last month:
    • Site-wide: None

Risk factors for the development of hepatocellular carcinoma (HCC) in chronic hepatitis B virus (HBV) infection: a systematic review and meta-analysis

epidemiology more details view paper
  • Downloaded 195 times
  • Download rankings, all-time:
    • Site-wide: 124,371
    • In epidemiology: 5,225
  • Year to date:
    • Site-wide: 94,466
  • Since beginning of last month:
    • Site-wide: 100,086

Efficacy and safety of tenofovir disoproxil fumarate (TDF) in hepatitis B virus (HBV) monoinfection: longitudinal analysis of a UK cohort

infectious diseases more details view paper
  • Downloaded 136 times
  • Download rankings, all-time:
    • Site-wide: 137,904
    • In infectious diseases: 5,435
  • Year to date:
    • Site-wide: 62,720
  • Since beginning of last month:
    • Site-wide: 87,933

Global prevalence and phylogeny of hepatitis B virus (HBV) drug and vaccine resistance mutations

evolutionary biology more details view paper
  • Downloaded 105 times
  • Download rankings, all-time:
    • Site-wide: 143,910
    • In evolutionary biology: 6,974
  • Year to date:
    • Site-wide: 107,238
  • Since beginning of last month:
    • Site-wide: 97,424

Enhancing epidemiological investigation of nosocomial SARS-CoV-2 infection with whole genome sequencing: A retrospective cohort study across four hospitals in the UK.

infectious diseases more details view paper
  • Downloaded 95 times
  • Download rankings, all-time:
    • Site-wide: 145,781
    • In infectious diseases: 5,707
  • Year to date:
    • Site-wide: 68,887
  • Since beginning of last month:
    • Site-wide: 9,113

PanLingua

News