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Author: Donovan H. Parks

  • ORCiD: http://orcid.org/0000-0001-6662-9010
  • Most recently observed institution: Australian Centre for Ecogenomics, School of Chemistry and Molecular Biosciences, The University of Queensland

Rankings

  • All-time downloads: 17,576 (rank: 3,799 out of 404,161)
  • Categories:
    • bioinformatics: 1,109 (rank: 10,521 (tie) out of 34,272)
    • microbiology: 16,467 (rank: 539 out of 46,811)

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Preprints

A proposal for a standardized bacterial taxonomy based on genome phylogeny

microbiology more details view paper
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    • In microbiology: 61 out of 8,320
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    • Site-wide: 1,310 out of 94,912
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    • Site-wide: 1,679 out of 94,912

A unified sequence catalogue of over 280,000 genomes obtained from the human gut microbiome

microbiology more details view paper
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    • In microbiology: 157 out of 8,320
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    • Site-wide: 1,125 out of 94,912
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    • Site-wide: 2,230 out of 94,912

Selection of representative genomes for 24,706 bacterial and archaeal species clusters provide a complete genome-based taxonomy

microbiology more details view paper
  • Downloaded 2,717 times
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    • In microbiology: 193 out of 8,320
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    • Site-wide: 1,443 out of 94,912
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    • Site-wide: 7,185 out of 94,912

AnnoTree: visualization and exploration of a functionally annotated microbial tree of life

bioinformatics more details view paper
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    • In bioinformatics: 1,701 out of 8,837
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    • Site-wide: 54,184 out of 94,912
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    • Site-wide: 53,836 out of 94,912

A rank-normalized archaeal taxonomy based on genome phylogeny resolves widespread incomplete and uneven classifications

microbiology more details view paper
  • Downloaded 915 times
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    • In microbiology: 884 out of 8,320
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Evidence for non-methanogenic metabolisms in globally distributed archaeal clades basal to the Methanomassiliicoccales

microbiology more details view paper
  • Downloaded 551 times
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    • In microbiology: 1,989 out of 8,320
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    • Site-wide: 11,821 out of 94,912

Diverse Arctic lake sediment microbiota shape methane emission temperature sensitivity

microbiology more details view paper
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    • In microbiology: 2,962 out of 8,320
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  • Since beginning of last month:
    • Site-wide: 20,515 out of 94,912

Lateral gene transfer drives metabolic flexibility in the anaerobic methane oxidising archaeal family Methanoperedenaceae

microbiology more details view paper
  • Downloaded 321 times
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    • Site-wide: 53,336 out of 94,912
    • In microbiology: 3,992 out of 8,320
  • Year to date:
    • Site-wide: 10,788 out of 94,912
  • Since beginning of last month:
    • Site-wide: 40,584 out of 94,912

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