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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 73,481 bioRxiv papers from 319,807 authors.

Author: Zamin Iqbal

Rankings

  • All-time downloads: 28,285 (rank: 846 out of 319,807)
  • Categories:
    • bioinformatics: 12,128 (rank: 253 out of 27,742)
    • genomics: 12,991 (rank: 778 out of 35,681)
    • microbiology: 3,166 (rank: 680 (tie) out of 33,377)

Downloads per author, site-wide

Preprints

Real-time search of all bacterial and viral genomic data

bioinformatics more details view paper
  • Downloaded 5,687 times
  • Download rankings, all-time:
    • Site-wide: 395 out of 73,481
    • In bioinformatics: 73 out of 7,157
  • Year to date:
    • Site-wide: 15,523 out of 73,481
  • Since beginning of last month:
    • Site-wide: 15,523 out of 73,481

Genome variation and meiotic recombination in Plasmodium falciparum: insights from deep sequencing of genetic crosses

genomics more details view paper
  • Downloaded 3,494 times
  • Download rankings, all-time:
    • Site-wide: 1,000 out of 73,481
    • In genomics: 245 out of 4,874
  • Year to date:
    • Site-wide: 40,607 out of 73,481
  • Since beginning of last month:
    • Site-wide: 40,607 out of 73,481

Improved genome inference in the MHC using a population reference graph

genomics more details view paper
  • Downloaded 3,272 times
  • Download rankings, all-time:
    • Site-wide: 1,137 out of 73,481
    • In genomics: 263 out of 4,874
  • Year to date:
    • Site-wide: 47,229 out of 73,481
  • Since beginning of last month:
    • Site-wide: 47,229 out of 73,481

Rapid antibiotic resistance predictions from genome sequence data for S. aureus and M. tuberculosis.

genomics more details view paper
  • Downloaded 3,158 times
  • Download rankings, all-time:
    • Site-wide: 1,209 out of 73,481
    • In genomics: 275 out of 4,874
  • Year to date:
    • Site-wide: 60,764 out of 73,481
  • Since beginning of last month:
    • Site-wide: 60,764 out of 73,481

A reference dataset of 5.4 million phased human variants validated by genetic inheritance from sequencing a three-generation 17-member pedigree

bioinformatics more details view paper
  • Downloaded 2,711 times
  • Download rankings, all-time:
    • Site-wide: 1,570 out of 73,481
    • In bioinformatics: 305 out of 7,157
  • Year to date:
    • Site-wide: 31,276 out of 73,481
  • Since beginning of last month:
    • Site-wide: 31,276 out of 73,481

A natural encoding of genetic variation in a Burrows-Wheeler Transform to enable mapping and genome inference

bioinformatics more details view paper
  • Downloaded 2,117 times
  • Download rankings, all-time:
    • Site-wide: 2,455 out of 73,481
    • In bioinformatics: 486 out of 7,157
  • Year to date:
    • Site-wide: 33,753 out of 73,481
  • Since beginning of last month:
    • Site-wide: 33,753 out of 73,481

Same-day diagnostic and surveillance data for tuberculosis via whole genome sequencing of direct respiratory samples.

microbiology more details view paper
  • Downloaded 1,966 times
  • Download rankings, all-time:
    • Site-wide: 2,801 out of 73,481
    • In microbiology: 89 out of 5,994
  • Year to date:
    • Site-wide: 55,263 out of 73,481
  • Since beginning of last month:
    • Site-wide: 55,263 out of 73,481

Using reference-free compressed data structures to analyse sequencing reads from thousands of human genomes

genomics more details view paper
  • Downloaded 1,850 times
  • Download rankings, all-time:
    • Site-wide: 3,095 out of 73,481
    • In genomics: 607 out of 4,874
  • Year to date:
    • Site-wide: 65,882 out of 73,481
  • Since beginning of last month:
    • Site-wide: 65,882 out of 73,481

Severe infections emerge from the microbiome by adaptive evolution

genomics more details view paper
  • Downloaded 1,217 times
  • Download rankings, all-time:
    • Site-wide: 6,294 out of 73,481
    • In genomics: 1,043 out of 4,874
  • Year to date:
    • Site-wide: 43,779 out of 73,481
  • Since beginning of last month:
    • Site-wide: 43,779 out of 73,481

Integrating long-range connectivity information into de Bruijn graphs

bioinformatics more details view paper
  • Downloaded 1,202 times
  • Download rankings, all-time:
    • Site-wide: 6,454 out of 73,481
    • In bioinformatics: 1,200 out of 7,157
  • Year to date:
    • Site-wide: 37,784 out of 73,481
  • Since beginning of last month:
    • Site-wide: 37,784 out of 73,481

The global distribution and spread of the mobilized colistin resistance gene mcr-1

microbiology more details view paper
  • Downloaded 1,200 times
  • Download rankings, all-time:
    • Site-wide: 6,466 out of 73,481
    • In microbiology: 262 out of 5,994
  • Year to date:
    • Site-wide: 54,354 out of 73,481
  • Since beginning of last month:
    • Site-wide: 54,354 out of 73,481

Detection of simple and complex de novo mutations without, with, or with multiple reference sequences

bioinformatics more details view paper
  • Downloaded 411 times
  • Download rankings, all-time:
    • Site-wide: 30,146 out of 73,481
    • In bioinformatics: 3,932 out of 7,157
  • Year to date:
    • Site-wide: 9,391 out of 73,481
  • Since beginning of last month:
    • Site-wide: 9,391 out of 73,481

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