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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 57,910 bioRxiv papers from 266,458 authors.

Author: Zamin Iqbal

Rankings

  • All-time downloads: 27,247 (rank: 633 out of 266,458)
  • Categories:
    • bioinformatics: 11,426 (rank: 203 out of 23,178)
    • genomics: 12,742 (rank: 635 (tie) out of 30,383)
    • microbiology: 3,079 (rank: 381 (tie) out of 26,516)

Downloads per author, site-wide

Preprints

Real-time search of all bacterial and viral genomic data

bioinformatics more details view paper
  • Downloaded 5,412 times
  • Download rankings, all-time:
    • Site-wide: 326 out of 57,910
    • In bioinformatics: 62 out of 5,899
  • Year to date:
    • Site-wide: 1,334 out of 57,910
  • Since beginning of last month:
    • Site-wide: 3,745 out of 57,910

Genome variation and meiotic recombination in Plasmodium falciparum: insights from deep sequencing of genetic crosses

genomics more details view paper
  • Downloaded 3,432 times
  • Download rankings, all-time:
    • Site-wide: 788 out of 57,910
    • In genomics: 207 out of 4,058
  • Year to date:
    • Site-wide: 40,130 out of 57,910
  • Since beginning of last month:
    • Site-wide: 28,490 out of 57,910

Improved genome inference in the MHC using a population reference graph

genomics more details view paper
  • Downloaded 3,222 times
  • Download rankings, all-time:
    • Site-wide: 877 out of 57,910
    • In genomics: 227 out of 4,058
  • Year to date:
    • Site-wide: 40,322 out of 57,910
  • Since beginning of last month:
    • Site-wide: 28,805 out of 57,910

Rapid antibiotic resistance predictions from genome sequence data for S. aureus and M. tuberculosis.

genomics more details view paper
  • Downloaded 3,103 times
  • Download rankings, all-time:
    • Site-wide: 938 out of 57,910
    • In genomics: 236 out of 4,058
  • Year to date:
    • Site-wide: 45,177 out of 57,910
  • Since beginning of last month:
    • Site-wide: 34,828 out of 57,910

A reference dataset of 5.4 million phased human variants validated by genetic inheritance from sequencing a three-generation 17-member pedigree

bioinformatics more details view paper
  • Downloaded 2,628 times
  • Download rankings, all-time:
    • Site-wide: 1,282 out of 57,910
    • In bioinformatics: 262 out of 5,899
  • Year to date:
    • Site-wide: 26,985 out of 57,910
  • Since beginning of last month:
    • Site-wide: 9,939 out of 57,910

A natural encoding of genetic variation in a Burrows-Wheeler Transform to enable mapping and genome inference

bioinformatics more details view paper
  • Downloaded 2,036 times
  • Download rankings, all-time:
    • Site-wide: 1,977 out of 57,910
    • In bioinformatics: 412 out of 5,899
  • Year to date:
    • Site-wide: 21,901 out of 57,910
  • Since beginning of last month:
    • Site-wide: 18,054 out of 57,910

Same-day diagnostic and surveillance data for tuberculosis via whole genome sequencing of direct respiratory samples.

microbiology more details view paper
  • Downloaded 1,919 times
  • Download rankings, all-time:
    • Site-wide: 2,218 out of 57,910
    • In microbiology: 52 out of 4,604
  • Year to date:
    • Site-wide: 27,912 out of 57,910
  • Since beginning of last month:
    • Site-wide: 10,806 out of 57,910

Using reference-free compressed data structures to analyse sequencing reads from thousands of human genomes

genomics more details view paper
  • Downloaded 1,816 times
  • Download rankings, all-time:
    • Site-wide: 2,421 out of 57,910
    • In genomics: 499 out of 4,058
  • Year to date:
    • Site-wide: 53,967 out of 57,910
  • Since beginning of last month:
    • Site-wide: 51,820 out of 57,910

Severe infections emerge from the microbiome by adaptive evolution

genomics more details view paper
  • Downloaded 1,169 times
  • Download rankings, all-time:
    • Site-wide: 5,031 out of 57,910
    • In genomics: 868 out of 4,058
  • Year to date:
    • Site-wide: 40,060 out of 57,910
  • Since beginning of last month:
    • Site-wide: 26,788 out of 57,910

The global distribution and spread of the mobilized colistin resistance gene mcr-1

microbiology more details view paper
  • Downloaded 1,160 times
  • Download rankings, all-time:
    • Site-wide: 5,088 out of 57,910
    • In microbiology: 183 out of 4,604
  • Year to date:
    • Site-wide: 26,239 out of 57,910
  • Since beginning of last month:
    • Site-wide: 27,364 out of 57,910

Integrating long-range connectivity information into de Bruijn graphs

bioinformatics more details view paper
  • Downloaded 1,123 times
  • Download rankings, all-time:
    • Site-wide: 5,378 out of 57,910
    • In bioinformatics: 1,034 out of 5,899
  • Year to date:
    • Site-wide: 23,319 out of 57,910
  • Since beginning of last month:
    • Site-wide: 14,532 out of 57,910

Detection of simple and complex de novo mutations without, with, or with multiple reference sequences

bioinformatics more details view paper
  • Downloaded 227 times
  • Download rankings, all-time:
    • Site-wide: 37,237 out of 57,910
    • In bioinformatics: 4,504 out of 5,899
  • Year to date:
    • Site-wide: 13,016 out of 57,910
  • Since beginning of last month:
    • Site-wide: 1,122 out of 57,910

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