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Author: Mads Albertsen

Rankings

  • All-time downloads: 24,468 (rank: 1,985 out of 383,801)
  • Categories:
    • bioinformatics: 4,177 (rank: 2,240 (tie) out of 32,862)
    • ecology: 3,448 (rank: 306 (tie) out of 16,475)
    • microbiology: 8,267 (rank: 864 out of 43,354)
    • molecular biology: 8,576 (rank: 173 (tie) out of 19,938)

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Preprints

Enabling high-accuracy long-read amplicon sequences using unique molecular identifiers with Nanopore or PacBio sequencing

molecular biology more details view paper
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Thousands of primer-free, high-quality, full-length SSU rRNA sequences from all domains of life

ecology more details view paper
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ampvis2: an R package to analyse and visualise 16S rRNA amplicon data

bioinformatics more details view paper
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Generation of comprehensive ecosystems-specific reference databases with species-level resolution by high-throughput full-length 16S rRNA gene sequencing and automated taxonomy assignment (AutoTax)

microbiology more details view paper
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Identifying the abundant and active microorganisms common to full scale anaerobic digesters

microbiology more details view paper
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    • In microbiology: 352 out of 7,723
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mmgenome: a toolbox for reproducible genome extraction from metagenomes

bioinformatics more details view paper
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Connecting structure to function with the recovery of over 1000 high-quality activated sludge metagenome-assembled genomes encoding full-length rRNA genes using long-read sequencing

microbiology more details view paper
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Unlinked rRNA genes are widespread among Bacteria and Archaea

microbiology more details view paper
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Peatland Acidobacteria with a dissimilatory sulfur metabolism

microbiology more details view paper
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    • In microbiology: 1,478 out of 7,723
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Characterization of a thaumarchaeal symbiont that drives incomplete nitrification in the tropical sponge Ianthella basta

microbiology more details view paper
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    • In microbiology: 1,533 out of 7,723
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Novel prosthecate bacteria from the candidate phylum Acetothermia revealed by culture-independent genomics and advanced microscopy

microbiology more details view paper
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Species-level microbiome composition of activated sludge - introducing the MiDAS 3 ecosystem-specific reference database and taxonomy

microbiology more details view paper
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    • In microbiology: 1,922 out of 7,723
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Exploring the upper pH limits of nitrite oxidation: diversity, ecophysiology, and adaptive traits of haloalkalitolerant Nitrospira

microbiology more details view paper
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    • In microbiology: 3,273 out of 7,723
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    • Site-wide: 6,906 out of 89,581
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    • Site-wide: 4,045 out of 89,581

The signal and the noise - characteristics of antisense RNA in complex microbial communities

microbiology more details view paper
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    • Site-wide: 69,381 out of 89,581
    • In microbiology: 5,451 out of 7,723
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    • Site-wide: 69,062 out of 89,581
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